ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U8D:A21:A22

Extra

PDB:
ATOM 1 O3' A A 20 45.420 10.462 19.457 1.00 14.06 O
ATOM 2 P U A 21 45.278 10.371 21.058 1.00 17.57 P
ATOM 3 OP1 U A 21 46.459 11.056 21.623 1.00 15.59 O
ATOM 4 OP2 U A 21 45.073 8.928 21.307 1.00 18.33 O
ATOM 5 O5' U A 21 43.954 11.187 21.425 1.00 15.41 O
ATOM 6 C5' U A 21 42.696 10.541 21.773 1.00 14.72 C
ATOM 7 C4' U A 21 41.978 11.395 22.807 1.00 14.61 C
ATOM 8 O4' U A 21 42.775 11.453 23.991 1.00 14.11 O
ATOM 9 C3' U A 21 41.774 12.824 22.315 1.00 13.18 C
ATOM 10 O3' U A 21 40.517 13.272 22.831 1.00 10.05 O
ATOM 11 C2' U A 21 42.798 13.639 23.103 1.00 13.16 C
ATOM 12 O2' U A 21 42.458 14.971 23.369 1.00 11.86 O
ATOM 13 C1' U A 21 42.962 12.785 24.367 1.00 12.76 C
ATOM 14 N1 U A 21 44.246 12.864 25.044 1.00 12.63 N
ATOM 15 C2 U A 21 44.272 13.420 26.310 1.00 12.49 C
ATOM 16 O2 U A 21 43.273 13.855 26.869 1.00 11.09 O
ATOM 17 N3 U A 21 45.512 13.445 26.897 1.00 12.26 N
ATOM 18 C4 U A 21 46.708 12.972 26.346 1.00 12.77 C
ATOM 19 O4 U A 21 47.745 13.082 26.975 1.00 13.05 O
ATOM 20 C5 U A 21 46.588 12.412 25.033 1.00 12.67 C
ATOM 21 C6 U A 21 45.390 12.385 24.437 1.00 12.34 C
ATOM 22 P G A 22 39.141 13.060 22.048 1.00 13.09 P
ATOM 23 OP1 G A 22 38.083 13.377 23.042 1.00 10.03 O
ATOM 24 OP2 G A 22 39.096 11.783 21.316 1.00 10.97 O
ATOM 25 O5' G A 22 39.187 14.193 20.930 1.00 11.94 O
TER

ATOM 1 O3' U B 21 40.517 13.272 22.831 1.00 10.05 O
ATOM 2 P G B 22 39.141 13.060 22.048 1.00 13.09 P
ATOM 3 OP1 G B 22 38.083 13.377 23.042 1.00 10.03 O
ATOM 4 OP2 G B 22 39.096 11.783 21.316 1.00 10.97 O
ATOM 5 O5' G B 22 39.187 14.193 20.930 1.00 11.94 O
ATOM 6 C5' G B 22 38.955 15.558 21.225 1.00 10.67 C
ATOM 7 C4' G B 22 38.971 16.337 19.929 1.00 10.54 C
ATOM 8 O4' G B 22 40.254 16.171 19.252 1.00 10.54 O
ATOM 9 C3' G B 22 37.973 15.801 18.925 1.00 8.49 C
ATOM 10 O3' G B 22 36.724 16.406 19.212 1.00 9.71 O
ATOM 11 C2' G B 22 38.576 16.253 17.605 1.00 9.01 C
ATOM 12 O2' G B 22 38.393 17.651 17.433 1.00 8.99 O
ATOM 13 C1' G B 22 40.060 15.983 17.850 1.00 10.41 C
ATOM 14 N9 G B 22 40.497 14.629 17.473 1.00 9.32 N
ATOM 15 C8 G B 22 40.487 13.516 18.280 1.00 9.31 C
ATOM 16 N7 G B 22 40.939 12.442 17.686 1.00 10.48 N
ATOM 17 C5 G B 22 41.259 12.859 16.408 1.00 10.37 C
ATOM 18 C6 G B 22 41.782 12.126 15.316 1.00 12.23 C
ATOM 19 O6 G B 22 42.036 10.920 15.257 1.00 11.04 O
ATOM 20 N1 G B 22 42.008 12.948 14.197 1.00 9.95 N
ATOM 21 C2 G B 22 41.748 14.286 14.145 1.00 9.72 C
ATOM 22 N2 G B 22 42.121 14.931 12.993 1.00 8.78 N
ATOM 23 N3 G B 22 41.191 14.972 15.147 1.00 9.91 N
ATOM 24 C4 G B 22 40.995 14.206 16.248 1.00 10.87 C
ATOM 25 P G B 23 35.372 15.646 18.858 1.00 12.29 P
ATOM 26 OP1 G B 23 34.265 16.448 19.436 1.00 9.96 O
ATOM 27 OP2 G B 23 35.501 14.191 19.191 1.00 11.57 O
ATOM 28 O5' G B 23 35.356 15.699 17.258 1.00 12.26 O
TER

Atoms:
C4: (46.708,12.972,26.346)
N3: (45.512,13.445,26.897)
OP1: (46.459,11.056,21.623)
OP2: (45.073,8.928,21.307)
C2: (44.272,13.420,26.310)
C1': (42.962,12.785,24.367)
C3': (41.774,12.824,22.315)
O5': (43.954,11.187,21.425)
O4': (42.775,11.453,23.991)
C5': (42.696,10.541,21.773)
P: (45.278,10.371,21.058)
C4': (41.978,11.395,22.807)
C2': (42.798,13.639,23.103)
O2': (42.458,14.971,23.369)
N1: (44.246,12.864,25.044)
O4: (47.745,13.082,26.975)
O2: (43.273,13.855,26.869)
C6: (45.390,12.385,24.437)
C5: (46.588,12.412,25.033)
O3': (40.517,13.272,22.831)
OP1: (38.083,13.377,23.042)
OP2: (39.096,11.783,21.316)
C3': (37.973,15.801,18.925)
C1': (40.060,15.983,17.850)
C5': (38.955,15.558,21.225)
O6: (42.036,10.920,15.257)
O4': (40.254,16.171,19.252)
C8: (40.487,13.516,18.280)
C2: (41.748,14.286,14.145)
C6: (41.782,12.126,15.316)
C5: (41.259,12.859,16.408)
C4: (40.995,14.206,16.248)
P: (39.141,13.060,22.048)
C4': (38.971,16.337,19.929)
C2': (38.576,16.253,17.605)
O2': (38.393,17.651,17.433)
N1: (42.008,12.948,14.197)
N2: (42.121,14.931,12.993)
N3: (41.191,14.972,15.147)
N7: (40.939,12.442,17.686)
N9: (40.497,14.629,17.473)
O5': (39.187,14.193,20.930)
O3': (36.724,16.406,19.212)
Image (generated by PyMOL):
PyMOL image
show in jmol