Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0306:0307
Extra
PDB:
ATOM 1 O3' A A 305 9.329 142.294 40.665 1.00 60.80 O
ATOM 2 P U A 306 10.080 142.320 39.252 1.00 62.91 P
ATOM 3 OP1 U A 306 10.892 143.558 39.232 1.00 62.39 O
ATOM 4 OP2 U A 306 9.085 142.078 38.177 1.00 65.80 O
ATOM 5 O5' U A 306 11.054 141.060 39.314 1.00 67.29 O
ATOM 6 C5' U A 306 10.554 139.703 39.194 1.00 72.49 C
ATOM 7 C4' U A 306 11.258 138.789 40.181 1.00 75.62 C
ATOM 8 O4' U A 306 12.693 138.984 40.058 1.00 77.04 O
ATOM 9 C3' U A 306 10.952 139.058 41.650 1.00 77.25 C
ATOM 10 O3' U A 306 9.731 138.438 42.108 1.00 78.28 O
ATOM 11 C2' U A 306 12.219 138.642 42.388 1.00 78.66 C
ATOM 12 O2' U A 306 12.275 137.292 42.782 1.00 81.49 O
ATOM 13 C1' U A 306 13.300 138.918 41.339 1.00 79.12 C
ATOM 14 N1 U A 306 14.112 140.126 41.556 1.00 79.22 N
ATOM 15 C2 U A 306 15.485 139.958 41.704 1.00 80.06 C
ATOM 16 O2 U A 306 16.037 138.864 41.662 1.00 78.60 O
ATOM 17 N3 U A 306 16.191 141.119 41.903 1.00 80.66 N
ATOM 18 C4 U A 306 15.684 142.400 41.963 1.00 80.95 C
ATOM 19 O4 U A 306 16.459 143.348 42.108 1.00 81.82 O
ATOM 20 C5 U A 306 14.262 142.489 41.805 1.00 79.74 C
ATOM 21 C6 U A 306 13.544 141.380 41.613 1.00 79.21 C
ATOM 22 P A A 307 9.417 136.868 41.805 1.00 76.93 P
ATOM 23 OP1 A A 307 10.649 136.068 41.598 1.00 75.96 O
ATOM 24 OP2 A A 307 8.374 136.857 40.753 1.00 78.07 O
ATOM 25 O5' A A 307 8.675 136.363 43.123 1.00 75.07 O
TER
ATOM 1 O3' U B 306 9.731 138.438 42.108 1.00 78.28 O
ATOM 2 P A B 307 9.417 136.868 41.805 1.00 76.93 P
ATOM 3 OP1 A B 307 10.649 136.068 41.598 1.00 75.96 O
ATOM 4 OP2 A B 307 8.374 136.857 40.753 1.00 78.07 O
ATOM 5 O5' A B 307 8.675 136.363 43.123 1.00 75.07 O
ATOM 6 C5' A B 307 9.396 135.846 44.255 1.00 73.18 C
ATOM 7 C4' A B 307 8.543 135.956 45.499 1.00 73.09 C
ATOM 8 O4' A B 307 8.401 137.352 45.864 1.00 73.32 O
ATOM 9 C3' A B 307 7.118 135.463 45.335 1.00 73.94 C
ATOM 10 O3' A B 307 7.034 134.058 45.511 1.00 75.33 O
ATOM 11 C2' A B 307 6.359 136.252 46.394 1.00 73.51 C
ATOM 12 O2' A B 307 6.491 135.720 47.694 1.00 75.19 O
ATOM 13 C1' A B 307 7.086 137.597 46.339 1.00 72.91 C
ATOM 14 N9 A B 307 6.468 138.599 45.467 1.00 72.64 N
ATOM 15 C8 A B 307 6.946 139.064 44.264 1.00 71.86 C
ATOM 16 N7 A B 307 6.213 140.007 43.733 1.00 71.68 N
ATOM 17 C5 A B 307 5.172 140.169 44.635 1.00 72.05 C
ATOM 18 C6 A B 307 4.065 141.030 44.649 1.00 72.30 C
ATOM 19 N6 A B 307 3.825 141.936 43.699 1.00 72.88 N
ATOM 20 N1 A B 307 3.205 140.931 45.685 1.00 72.14 N
ATOM 21 C2 A B 307 3.458 140.030 46.641 1.00 72.59 C
ATOM 22 N3 A B 307 4.472 139.173 46.746 1.00 73.17 N
ATOM 23 C4 A B 307 5.305 139.295 45.698 1.00 72.36 C
ATOM 24 P G B 308 5.986 133.214 44.639 1.00 76.54 P
ATOM 25 OP1 G B 308 6.271 131.771 44.858 1.00 76.89 O
ATOM 26 OP2 G B 308 5.987 133.755 43.256 1.00 77.82 O
ATOM 27 O5' G B 308 4.584 133.579 45.295 1.00 75.71 O
TER
ATOM 2 P U A 306 10.080 142.320 39.252 1.00 62.91 P
ATOM 3 OP1 U A 306 10.892 143.558 39.232 1.00 62.39 O
ATOM 4 OP2 U A 306 9.085 142.078 38.177 1.00 65.80 O
ATOM 5 O5' U A 306 11.054 141.060 39.314 1.00 67.29 O
ATOM 6 C5' U A 306 10.554 139.703 39.194 1.00 72.49 C
ATOM 7 C4' U A 306 11.258 138.789 40.181 1.00 75.62 C
ATOM 8 O4' U A 306 12.693 138.984 40.058 1.00 77.04 O
ATOM 9 C3' U A 306 10.952 139.058 41.650 1.00 77.25 C
ATOM 10 O3' U A 306 9.731 138.438 42.108 1.00 78.28 O
ATOM 11 C2' U A 306 12.219 138.642 42.388 1.00 78.66 C
ATOM 12 O2' U A 306 12.275 137.292 42.782 1.00 81.49 O
ATOM 13 C1' U A 306 13.300 138.918 41.339 1.00 79.12 C
ATOM 14 N1 U A 306 14.112 140.126 41.556 1.00 79.22 N
ATOM 15 C2 U A 306 15.485 139.958 41.704 1.00 80.06 C
ATOM 16 O2 U A 306 16.037 138.864 41.662 1.00 78.60 O
ATOM 17 N3 U A 306 16.191 141.119 41.903 1.00 80.66 N
ATOM 18 C4 U A 306 15.684 142.400 41.963 1.00 80.95 C
ATOM 19 O4 U A 306 16.459 143.348 42.108 1.00 81.82 O
ATOM 20 C5 U A 306 14.262 142.489 41.805 1.00 79.74 C
ATOM 21 C6 U A 306 13.544 141.380 41.613 1.00 79.21 C
ATOM 22 P A A 307 9.417 136.868 41.805 1.00 76.93 P
ATOM 23 OP1 A A 307 10.649 136.068 41.598 1.00 75.96 O
ATOM 24 OP2 A A 307 8.374 136.857 40.753 1.00 78.07 O
ATOM 25 O5' A A 307 8.675 136.363 43.123 1.00 75.07 O
TER
ATOM 1 O3' U B 306 9.731 138.438 42.108 1.00 78.28 O
ATOM 2 P A B 307 9.417 136.868 41.805 1.00 76.93 P
ATOM 3 OP1 A B 307 10.649 136.068 41.598 1.00 75.96 O
ATOM 4 OP2 A B 307 8.374 136.857 40.753 1.00 78.07 O
ATOM 5 O5' A B 307 8.675 136.363 43.123 1.00 75.07 O
ATOM 6 C5' A B 307 9.396 135.846 44.255 1.00 73.18 C
ATOM 7 C4' A B 307 8.543 135.956 45.499 1.00 73.09 C
ATOM 8 O4' A B 307 8.401 137.352 45.864 1.00 73.32 O
ATOM 9 C3' A B 307 7.118 135.463 45.335 1.00 73.94 C
ATOM 10 O3' A B 307 7.034 134.058 45.511 1.00 75.33 O
ATOM 11 C2' A B 307 6.359 136.252 46.394 1.00 73.51 C
ATOM 12 O2' A B 307 6.491 135.720 47.694 1.00 75.19 O
ATOM 13 C1' A B 307 7.086 137.597 46.339 1.00 72.91 C
ATOM 14 N9 A B 307 6.468 138.599 45.467 1.00 72.64 N
ATOM 15 C8 A B 307 6.946 139.064 44.264 1.00 71.86 C
ATOM 16 N7 A B 307 6.213 140.007 43.733 1.00 71.68 N
ATOM 17 C5 A B 307 5.172 140.169 44.635 1.00 72.05 C
ATOM 18 C6 A B 307 4.065 141.030 44.649 1.00 72.30 C
ATOM 19 N6 A B 307 3.825 141.936 43.699 1.00 72.88 N
ATOM 20 N1 A B 307 3.205 140.931 45.685 1.00 72.14 N
ATOM 21 C2 A B 307 3.458 140.030 46.641 1.00 72.59 C
ATOM 22 N3 A B 307 4.472 139.173 46.746 1.00 73.17 N
ATOM 23 C4 A B 307 5.305 139.295 45.698 1.00 72.36 C
ATOM 24 P G B 308 5.986 133.214 44.639 1.00 76.54 P
ATOM 25 OP1 G B 308 6.271 131.771 44.858 1.00 76.89 O
ATOM 26 OP2 G B 308 5.987 133.755 43.256 1.00 77.82 O
ATOM 27 O5' G B 308 4.584 133.579 45.295 1.00 75.71 O
TER
Atoms:
C4: (15.684,142.400,41.963)
N3: (16.191,141.119,41.903)
OP1: (10.892,143.558,39.232)
OP2: (9.085,142.078,38.177)
C2: (15.485,139.958,41.704)
C1': (13.300,138.918,41.339)
C3': (10.952,139.058,41.650)
O5': (11.054,141.060,39.314)
O4': (12.693,138.984,40.058)
C5': (10.554,139.703,39.194)
P: (10.080,142.320,39.252)
C4': (11.258,138.789,40.181)
C2': (12.219,138.642,42.388)
O2': (12.275,137.292,42.782)
N1: (14.112,140.126,41.556)
O4: (16.459,143.348,42.108)
O2: (16.037,138.864,41.662)
C6: (13.544,141.380,41.613)
C5: (14.262,142.489,41.805)
O3': (9.731,138.438,42.108)
N3: (16.191,141.119,41.903)
OP1: (10.892,143.558,39.232)
OP2: (9.085,142.078,38.177)
C2: (15.485,139.958,41.704)
C1': (13.300,138.918,41.339)
C3': (10.952,139.058,41.650)
O5': (11.054,141.060,39.314)
O4': (12.693,138.984,40.058)
C5': (10.554,139.703,39.194)
P: (10.080,142.320,39.252)
C4': (11.258,138.789,40.181)
C2': (12.219,138.642,42.388)
O2': (12.275,137.292,42.782)
N1: (14.112,140.126,41.556)
O4: (16.459,143.348,42.108)
O2: (16.037,138.864,41.662)
C6: (13.544,141.380,41.613)
C5: (14.262,142.489,41.805)
O3': (9.731,138.438,42.108)
OP1: (10.649,136.068,41.598)
OP2: (8.374,136.857,40.753)
C3': (7.118,135.463,45.335)
C1': (7.086,137.597,46.339)
C5': (9.396,135.846,44.255)
O4': (8.401,137.352,45.864)
C8: (6.946,139.064,44.264)
O2': (6.491,135.720,47.694)
C6: (4.065,141.030,44.649)
C5: (5.172,140.169,44.635)
C4: (5.305,139.295,45.698)
P: (9.417,136.868,41.805)
C4': (8.543,135.956,45.499)
C2': (6.359,136.252,46.394)
C2: (3.458,140.030,46.641)
N1: (3.205,140.931,45.685)
N3: (4.472,139.173,46.746)
N6: (3.825,141.936,43.699)
N7: (6.213,140.007,43.733)
N9: (6.468,138.599,45.467)
O5': (8.675,136.363,43.123)
O3': (7.034,134.058,45.511)
OP2: (8.374,136.857,40.753)
C3': (7.118,135.463,45.335)
C1': (7.086,137.597,46.339)
C5': (9.396,135.846,44.255)
O4': (8.401,137.352,45.864)
C8: (6.946,139.064,44.264)
O2': (6.491,135.720,47.694)
C6: (4.065,141.030,44.649)
C5: (5.172,140.169,44.635)
C4: (5.305,139.295,45.698)
P: (9.417,136.868,41.805)
C4': (8.543,135.956,45.499)
C2': (6.359,136.252,46.394)
C2: (3.458,140.030,46.641)
N1: (3.205,140.931,45.685)
N3: (4.472,139.173,46.746)
N6: (3.825,141.936,43.699)
N7: (6.213,140.007,43.733)
N9: (6.468,138.599,45.467)
O5': (8.675,136.363,43.123)
O3': (7.034,134.058,45.511)
Image (generated by PyMOL):