Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:373:3104
Extra
PDB:
ATOM 1 O3' C A 72 37.395 -44.732 0.843 1.00118.77 O
ATOM 2 P C A 73 36.536 -46.034 0.472 1.00 81.26 P
ATOM 3 OP1 C A 73 36.926 -47.088 1.419 1.00 80.84 O
ATOM 4 OP2 C A 73 36.711 -46.287 -0.989 1.00 82.36 O
ATOM 5 O5' C A 73 35.043 -45.559 0.768 1.00 81.04 O
ATOM 6 C5' C A 73 33.961 -45.931 -0.084 1.00 81.83 C
ATOM 7 C4' C A 73 32.662 -45.324 0.397 1.00 81.44 C
ATOM 8 O4' C A 73 32.050 -46.203 1.376 1.00 81.04 O
ATOM 9 C3' C A 73 32.801 -43.975 1.094 1.00 80.60 C
ATOM 10 O3' C A 73 32.698 -42.903 0.187 1.00 80.98 O
ATOM 11 C2' C A 73 31.706 -43.984 2.166 1.00 79.96 C
ATOM 12 O2' C A 73 30.466 -43.511 1.650 1.00 80.31 O
ATOM 13 C1' C A 73 31.568 -45.468 2.478 1.00 80.13 C
ATOM 14 N1 C A 73 32.333 -45.874 3.673 1.00 79.34 N
ATOM 15 C2 C A 73 31.721 -45.783 4.915 1.00 78.52 C
ATOM 16 O2 C A 73 30.577 -45.312 4.935 1.00 78.51 O
ATOM 17 N3 C A 73 32.383 -46.199 6.025 1.00 77.81 N
ATOM 18 C4 C A 73 33.619 -46.687 5.893 1.00 77.91 C
ATOM 19 N4 C A 73 34.288 -47.095 6.965 1.00 77.22 N
ATOM 20 C5 C A 73 34.257 -46.782 4.629 1.00 78.74 C
ATOM 21 C6 C A 73 33.586 -46.377 3.552 1.00 79.43 C
ATOM 22 P G A 74 33.292 -41.457 0.544 1.00 68.70 P
ATOM 23 OP1 G A 74 32.824 -40.538 -0.517 1.00 69.27 O
ATOM 24 OP2 G A 74 34.760 -41.618 0.776 1.00 68.46 O
ATOM 25 O5' G A 74 32.569 -41.087 1.902 1.00 67.73 O
TER
ATOM 1 O3' A B 103 24.120 -46.105 12.318 1.00 67.33 O
ATOM 2 P C B 104 24.047 -47.072 11.033 1.00 63.68 P
ATOM 3 OP1 C B 104 22.674 -47.625 11.005 1.00 64.04 O
ATOM 4 OP2 C B 104 25.202 -48.015 11.111 1.00 63.71 O
ATOM 5 O5' C B 104 24.254 -46.060 9.803 1.00 64.17 O
ATOM 6 C5' C B 104 23.173 -45.276 9.288 1.00 64.45 C
ATOM 7 C4' C B 104 23.632 -44.335 8.187 1.00 64.86 C
ATOM 8 O4' C B 104 24.860 -43.666 8.587 1.00 64.28 O
ATOM 9 C3' C B 104 23.984 -44.979 6.851 1.00 65.84 C
ATOM 10 O3' C B 104 22.855 -45.202 6.032 1.00 66.58 O
ATOM 11 C2' C B 104 24.949 -43.976 6.248 1.00 65.86 C
ATOM 12 O2' C B 104 24.245 -42.876 5.724 1.00 66.02 O
ATOM 13 C1' C B 104 25.715 -43.513 7.474 1.00 64.85 C
ATOM 14 N1 C B 104 26.915 -44.334 7.692 1.00 64.75 N
ATOM 15 C2 C B 104 27.991 -44.278 6.802 1.00 65.19 C
ATOM 16 O2 C B 104 27.936 -43.511 5.825 1.00 65.66 O
ATOM 17 N3 C B 104 29.072 -45.074 7.040 1.00 65.11 N
ATOM 18 C4 C B 104 29.126 -45.900 8.094 1.00 64.61 C
ATOM 19 N4 C B 104 30.201 -46.671 8.309 1.00 64.55 N
ATOM 20 C5 C B 104 28.040 -45.966 8.994 1.00 64.17 C
ATOM 21 C6 C B 104 26.972 -45.186 8.753 1.00 64.27 C
ATOM 22 P U B 105 22.432 -46.684 5.562 1.00 66.96 P
ATOM 23 OP1 U B 105 20.985 -46.631 5.400 1.00 67.26 O
ATOM 24 OP2 U B 105 23.014 -47.663 6.527 1.00 66.51 O
ATOM 25 O5' U B 105 23.131 -46.839 4.145 1.00 67.84 O
TER
ATOM 2 P C A 73 36.536 -46.034 0.472 1.00 81.26 P
ATOM 3 OP1 C A 73 36.926 -47.088 1.419 1.00 80.84 O
ATOM 4 OP2 C A 73 36.711 -46.287 -0.989 1.00 82.36 O
ATOM 5 O5' C A 73 35.043 -45.559 0.768 1.00 81.04 O
ATOM 6 C5' C A 73 33.961 -45.931 -0.084 1.00 81.83 C
ATOM 7 C4' C A 73 32.662 -45.324 0.397 1.00 81.44 C
ATOM 8 O4' C A 73 32.050 -46.203 1.376 1.00 81.04 O
ATOM 9 C3' C A 73 32.801 -43.975 1.094 1.00 80.60 C
ATOM 10 O3' C A 73 32.698 -42.903 0.187 1.00 80.98 O
ATOM 11 C2' C A 73 31.706 -43.984 2.166 1.00 79.96 C
ATOM 12 O2' C A 73 30.466 -43.511 1.650 1.00 80.31 O
ATOM 13 C1' C A 73 31.568 -45.468 2.478 1.00 80.13 C
ATOM 14 N1 C A 73 32.333 -45.874 3.673 1.00 79.34 N
ATOM 15 C2 C A 73 31.721 -45.783 4.915 1.00 78.52 C
ATOM 16 O2 C A 73 30.577 -45.312 4.935 1.00 78.51 O
ATOM 17 N3 C A 73 32.383 -46.199 6.025 1.00 77.81 N
ATOM 18 C4 C A 73 33.619 -46.687 5.893 1.00 77.91 C
ATOM 19 N4 C A 73 34.288 -47.095 6.965 1.00 77.22 N
ATOM 20 C5 C A 73 34.257 -46.782 4.629 1.00 78.74 C
ATOM 21 C6 C A 73 33.586 -46.377 3.552 1.00 79.43 C
ATOM 22 P G A 74 33.292 -41.457 0.544 1.00 68.70 P
ATOM 23 OP1 G A 74 32.824 -40.538 -0.517 1.00 69.27 O
ATOM 24 OP2 G A 74 34.760 -41.618 0.776 1.00 68.46 O
ATOM 25 O5' G A 74 32.569 -41.087 1.902 1.00 67.73 O
TER
ATOM 1 O3' A B 103 24.120 -46.105 12.318 1.00 67.33 O
ATOM 2 P C B 104 24.047 -47.072 11.033 1.00 63.68 P
ATOM 3 OP1 C B 104 22.674 -47.625 11.005 1.00 64.04 O
ATOM 4 OP2 C B 104 25.202 -48.015 11.111 1.00 63.71 O
ATOM 5 O5' C B 104 24.254 -46.060 9.803 1.00 64.17 O
ATOM 6 C5' C B 104 23.173 -45.276 9.288 1.00 64.45 C
ATOM 7 C4' C B 104 23.632 -44.335 8.187 1.00 64.86 C
ATOM 8 O4' C B 104 24.860 -43.666 8.587 1.00 64.28 O
ATOM 9 C3' C B 104 23.984 -44.979 6.851 1.00 65.84 C
ATOM 10 O3' C B 104 22.855 -45.202 6.032 1.00 66.58 O
ATOM 11 C2' C B 104 24.949 -43.976 6.248 1.00 65.86 C
ATOM 12 O2' C B 104 24.245 -42.876 5.724 1.00 66.02 O
ATOM 13 C1' C B 104 25.715 -43.513 7.474 1.00 64.85 C
ATOM 14 N1 C B 104 26.915 -44.334 7.692 1.00 64.75 N
ATOM 15 C2 C B 104 27.991 -44.278 6.802 1.00 65.19 C
ATOM 16 O2 C B 104 27.936 -43.511 5.825 1.00 65.66 O
ATOM 17 N3 C B 104 29.072 -45.074 7.040 1.00 65.11 N
ATOM 18 C4 C B 104 29.126 -45.900 8.094 1.00 64.61 C
ATOM 19 N4 C B 104 30.201 -46.671 8.309 1.00 64.55 N
ATOM 20 C5 C B 104 28.040 -45.966 8.994 1.00 64.17 C
ATOM 21 C6 C B 104 26.972 -45.186 8.753 1.00 64.27 C
ATOM 22 P U B 105 22.432 -46.684 5.562 1.00 66.96 P
ATOM 23 OP1 U B 105 20.985 -46.631 5.400 1.00 67.26 O
ATOM 24 OP2 U B 105 23.014 -47.663 6.527 1.00 66.51 O
ATOM 25 O5' U B 105 23.131 -46.839 4.145 1.00 67.84 O
TER
Atoms:
C2: (31.721,-45.783,4.915)
OP1: (36.926,-47.088,1.419)
OP2: (36.711,-46.287,-0.989)
C4: (33.619,-46.687,5.893)
O5': (35.043,-45.559,0.768)
C3': (32.801,-43.975,1.094)
C1': (31.568,-45.468,2.478)
O4': (32.050,-46.203,1.376)
C5': (33.961,-45.931,-0.084)
P: (36.536,-46.034,0.472)
O2: (30.577,-45.312,4.935)
C4': (32.662,-45.324,0.397)
C2': (31.706,-43.984,2.166)
O2': (30.466,-43.511,1.650)
N1: (32.333,-45.874,3.673)
N3: (32.383,-46.199,6.025)
N4: (34.288,-47.095,6.965)
C6: (33.586,-46.377,3.552)
C5: (34.257,-46.782,4.629)
O3': (32.698,-42.903,0.187)
OP1: (36.926,-47.088,1.419)
OP2: (36.711,-46.287,-0.989)
C4: (33.619,-46.687,5.893)
O5': (35.043,-45.559,0.768)
C3': (32.801,-43.975,1.094)
C1': (31.568,-45.468,2.478)
O4': (32.050,-46.203,1.376)
C5': (33.961,-45.931,-0.084)
P: (36.536,-46.034,0.472)
O2: (30.577,-45.312,4.935)
C4': (32.662,-45.324,0.397)
C2': (31.706,-43.984,2.166)
O2': (30.466,-43.511,1.650)
N1: (32.333,-45.874,3.673)
N3: (32.383,-46.199,6.025)
N4: (34.288,-47.095,6.965)
C6: (33.586,-46.377,3.552)
C5: (34.257,-46.782,4.629)
O3': (32.698,-42.903,0.187)
C2: (27.991,-44.278,6.802)
OP1: (22.674,-47.625,11.005)
OP2: (25.202,-48.015,11.111)
C4: (29.126,-45.900,8.094)
O5': (24.254,-46.060,9.803)
C3': (23.984,-44.979,6.851)
C1': (25.715,-43.513,7.474)
O4': (24.860,-43.666,8.587)
C5': (23.173,-45.276,9.288)
P: (24.047,-47.072,11.033)
O2: (27.936,-43.511,5.825)
C4': (23.632,-44.335,8.187)
C2': (24.949,-43.976,6.248)
O2': (24.245,-42.876,5.724)
N1: (26.915,-44.334,7.692)
N3: (29.072,-45.074,7.040)
N4: (30.201,-46.671,8.309)
C6: (26.972,-45.186,8.753)
C5: (28.040,-45.966,8.994)
O3': (22.855,-45.202,6.032)
OP1: (22.674,-47.625,11.005)
OP2: (25.202,-48.015,11.111)
C4: (29.126,-45.900,8.094)
O5': (24.254,-46.060,9.803)
C3': (23.984,-44.979,6.851)
C1': (25.715,-43.513,7.474)
O4': (24.860,-43.666,8.587)
C5': (23.173,-45.276,9.288)
P: (24.047,-47.072,11.033)
O2: (27.936,-43.511,5.825)
C4': (23.632,-44.335,8.187)
C2': (24.949,-43.976,6.248)
O2': (24.245,-42.876,5.724)
N1: (26.915,-44.334,7.692)
N3: (29.072,-45.074,7.040)
N4: (30.201,-46.671,8.309)
C6: (26.972,-45.186,8.753)
C5: (28.040,-45.966,8.994)
O3': (22.855,-45.202,6.032)
Image (generated by PyMOL):