Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.631 79.870 67.988 1.00 62.10 O
ATOM 2 P C A1234 5.003 80.029 66.431 1.00 65.35 P
ATOM 3 OP1 C A1234 4.422 78.868 65.708 1.00 64.48 O
ATOM 4 OP2 C A1234 6.461 80.293 66.322 1.00 65.25 O
ATOM 5 O5' C A1234 4.214 81.348 66.007 1.00 63.05 O
ATOM 6 C5' C A1234 2.781 81.391 66.090 1.00 63.35 C
ATOM 7 C4' C A1234 2.261 82.770 65.759 1.00 63.84 C
ATOM 8 O4' C A1234 2.584 83.703 66.821 1.00 65.44 O
ATOM 9 C3' C A1234 2.823 83.431 64.518 1.00 63.45 C
ATOM 10 O3' C A1234 2.243 82.930 63.331 1.00 64.08 O
ATOM 11 C2' C A1234 2.487 84.893 64.768 1.00 64.54 C
ATOM 12 O2' C A1234 1.137 85.222 64.523 1.00 64.46 O
ATOM 13 C1' C A1234 2.762 85.002 66.268 1.00 65.52 C
ATOM 14 N1 C A1234 4.144 85.454 66.531 1.00 66.11 N
ATOM 15 C2 C A1234 4.402 86.830 66.579 1.00 66.32 C
ATOM 16 O2 C A1234 3.456 87.630 66.439 1.00 67.63 O
ATOM 17 N3 C A1234 5.669 87.254 66.777 1.00 65.88 N
ATOM 18 C4 C A1234 6.653 86.368 66.937 1.00 65.86 C
ATOM 19 N4 C A1234 7.887 86.834 67.128 1.00 66.80 N
ATOM 20 C5 C A1234 6.416 84.965 66.910 1.00 65.43 C
ATOM 21 C6 C A1234 5.161 84.556 66.708 1.00 65.59 C
ATOM 22 P U A1235 3.165 82.707 62.039 1.00 67.69 P
ATOM 23 OP1 U A1235 2.316 82.186 60.943 1.00 69.30 O
ATOM 24 OP2 U A1235 4.361 81.936 62.461 1.00 66.63 O
ATOM 25 O5' U A1235 3.631 84.181 61.656 1.00 67.82 O
TER
ATOM 1 O3' A B1239 7.835 98.579 66.288 1.00 98.47 O
ATOM 2 P C B1240 7.233 98.333 67.760 1.00 98.54 P
ATOM 3 OP1 C B1240 7.313 99.610 68.511 1.00 98.67 O
ATOM 4 OP2 C B1240 7.844 97.105 68.331 1.00 98.92 O
ATOM 5 O5' C B1240 5.693 98.028 67.512 1.00 96.68 O
ATOM 6 C5' C B1240 4.896 97.464 68.555 1.00 93.10 C
ATOM 7 C4' C B1240 3.539 97.082 68.031 1.00 91.11 C
ATOM 8 O4' C B1240 3.671 96.177 66.905 1.00 89.94 O
ATOM 9 C3' C B1240 2.719 96.300 69.032 1.00 90.64 C
ATOM 10 O3' C B1240 2.103 97.165 69.964 1.00 90.49 O
ATOM 11 C2' C B1240 1.740 95.544 68.147 1.00 89.79 C
ATOM 12 O2' C B1240 0.645 96.334 67.726 1.00 89.74 O
ATOM 13 C1' C B1240 2.632 95.206 66.948 1.00 88.93 C
ATOM 14 N1 C B1240 3.243 93.860 67.005 1.00 87.15 N
ATOM 15 C2 C B1240 2.417 92.726 66.870 1.00 86.20 C
ATOM 16 O2 C B1240 1.188 92.879 66.748 1.00 85.44 O
ATOM 17 N3 C B1240 2.982 91.496 66.881 1.00 85.24 N
ATOM 18 C4 C B1240 4.304 91.368 67.029 1.00 84.56 C
ATOM 19 N4 C B1240 4.817 90.137 67.020 1.00 84.08 N
ATOM 20 C5 C B1240 5.159 92.496 67.190 1.00 84.37 C
ATOM 21 C6 C B1240 4.594 93.709 67.172 1.00 85.57 C
ATOM 22 P U B1241 2.128 96.784 71.517 1.00 91.18 P
ATOM 23 OP1 U B1241 1.296 97.786 72.229 1.00 91.80 O
ATOM 24 OP2 U B1241 3.540 96.572 71.930 1.00 90.68 O
ATOM 25 O5' U B1241 1.375 95.382 71.554 1.00 89.67 O
TER
ATOM 2 P C A1234 5.003 80.029 66.431 1.00 65.35 P
ATOM 3 OP1 C A1234 4.422 78.868 65.708 1.00 64.48 O
ATOM 4 OP2 C A1234 6.461 80.293 66.322 1.00 65.25 O
ATOM 5 O5' C A1234 4.214 81.348 66.007 1.00 63.05 O
ATOM 6 C5' C A1234 2.781 81.391 66.090 1.00 63.35 C
ATOM 7 C4' C A1234 2.261 82.770 65.759 1.00 63.84 C
ATOM 8 O4' C A1234 2.584 83.703 66.821 1.00 65.44 O
ATOM 9 C3' C A1234 2.823 83.431 64.518 1.00 63.45 C
ATOM 10 O3' C A1234 2.243 82.930 63.331 1.00 64.08 O
ATOM 11 C2' C A1234 2.487 84.893 64.768 1.00 64.54 C
ATOM 12 O2' C A1234 1.137 85.222 64.523 1.00 64.46 O
ATOM 13 C1' C A1234 2.762 85.002 66.268 1.00 65.52 C
ATOM 14 N1 C A1234 4.144 85.454 66.531 1.00 66.11 N
ATOM 15 C2 C A1234 4.402 86.830 66.579 1.00 66.32 C
ATOM 16 O2 C A1234 3.456 87.630 66.439 1.00 67.63 O
ATOM 17 N3 C A1234 5.669 87.254 66.777 1.00 65.88 N
ATOM 18 C4 C A1234 6.653 86.368 66.937 1.00 65.86 C
ATOM 19 N4 C A1234 7.887 86.834 67.128 1.00 66.80 N
ATOM 20 C5 C A1234 6.416 84.965 66.910 1.00 65.43 C
ATOM 21 C6 C A1234 5.161 84.556 66.708 1.00 65.59 C
ATOM 22 P U A1235 3.165 82.707 62.039 1.00 67.69 P
ATOM 23 OP1 U A1235 2.316 82.186 60.943 1.00 69.30 O
ATOM 24 OP2 U A1235 4.361 81.936 62.461 1.00 66.63 O
ATOM 25 O5' U A1235 3.631 84.181 61.656 1.00 67.82 O
TER
ATOM 1 O3' A B1239 7.835 98.579 66.288 1.00 98.47 O
ATOM 2 P C B1240 7.233 98.333 67.760 1.00 98.54 P
ATOM 3 OP1 C B1240 7.313 99.610 68.511 1.00 98.67 O
ATOM 4 OP2 C B1240 7.844 97.105 68.331 1.00 98.92 O
ATOM 5 O5' C B1240 5.693 98.028 67.512 1.00 96.68 O
ATOM 6 C5' C B1240 4.896 97.464 68.555 1.00 93.10 C
ATOM 7 C4' C B1240 3.539 97.082 68.031 1.00 91.11 C
ATOM 8 O4' C B1240 3.671 96.177 66.905 1.00 89.94 O
ATOM 9 C3' C B1240 2.719 96.300 69.032 1.00 90.64 C
ATOM 10 O3' C B1240 2.103 97.165 69.964 1.00 90.49 O
ATOM 11 C2' C B1240 1.740 95.544 68.147 1.00 89.79 C
ATOM 12 O2' C B1240 0.645 96.334 67.726 1.00 89.74 O
ATOM 13 C1' C B1240 2.632 95.206 66.948 1.00 88.93 C
ATOM 14 N1 C B1240 3.243 93.860 67.005 1.00 87.15 N
ATOM 15 C2 C B1240 2.417 92.726 66.870 1.00 86.20 C
ATOM 16 O2 C B1240 1.188 92.879 66.748 1.00 85.44 O
ATOM 17 N3 C B1240 2.982 91.496 66.881 1.00 85.24 N
ATOM 18 C4 C B1240 4.304 91.368 67.029 1.00 84.56 C
ATOM 19 N4 C B1240 4.817 90.137 67.020 1.00 84.08 N
ATOM 20 C5 C B1240 5.159 92.496 67.190 1.00 84.37 C
ATOM 21 C6 C B1240 4.594 93.709 67.172 1.00 85.57 C
ATOM 22 P U B1241 2.128 96.784 71.517 1.00 91.18 P
ATOM 23 OP1 U B1241 1.296 97.786 72.229 1.00 91.80 O
ATOM 24 OP2 U B1241 3.540 96.572 71.930 1.00 90.68 O
ATOM 25 O5' U B1241 1.375 95.382 71.554 1.00 89.67 O
TER
Atoms:
C2: (4.402,86.830,66.579)
OP1: (4.422,78.868,65.708)
OP2: (6.461,80.293,66.322)
C4: (6.653,86.368,66.937)
O5': (4.214,81.348,66.007)
C3': (2.823,83.431,64.518)
C1': (2.762,85.002,66.268)
O4': (2.584,83.703,66.821)
C5': (2.781,81.391,66.090)
P: (5.003,80.029,66.431)
O2: (3.456,87.630,66.439)
C4': (2.261,82.770,65.759)
C2': (2.487,84.893,64.768)
O2': (1.137,85.222,64.523)
N1: (4.144,85.454,66.531)
N3: (5.669,87.254,66.777)
N4: (7.887,86.834,67.128)
C6: (5.161,84.556,66.708)
C5: (6.416,84.965,66.910)
O3': (2.243,82.930,63.331)
OP1: (4.422,78.868,65.708)
OP2: (6.461,80.293,66.322)
C4: (6.653,86.368,66.937)
O5': (4.214,81.348,66.007)
C3': (2.823,83.431,64.518)
C1': (2.762,85.002,66.268)
O4': (2.584,83.703,66.821)
C5': (2.781,81.391,66.090)
P: (5.003,80.029,66.431)
O2: (3.456,87.630,66.439)
C4': (2.261,82.770,65.759)
C2': (2.487,84.893,64.768)
O2': (1.137,85.222,64.523)
N1: (4.144,85.454,66.531)
N3: (5.669,87.254,66.777)
N4: (7.887,86.834,67.128)
C6: (5.161,84.556,66.708)
C5: (6.416,84.965,66.910)
O3': (2.243,82.930,63.331)
C2: (2.417,92.726,66.870)
OP1: (7.313,99.610,68.511)
OP2: (7.844,97.105,68.331)
C4: (4.304,91.368,67.029)
O5': (5.693,98.028,67.512)
C3': (2.719,96.300,69.032)
C1': (2.632,95.206,66.948)
O4': (3.671,96.177,66.905)
C5': (4.896,97.464,68.555)
P: (7.233,98.333,67.760)
O2: (1.188,92.879,66.748)
C4': (3.539,97.082,68.031)
C2': (1.740,95.544,68.147)
O2': (0.645,96.334,67.726)
N1: (3.243,93.860,67.005)
N3: (2.982,91.496,66.881)
N4: (4.817,90.137,67.020)
C6: (4.594,93.709,67.172)
C5: (5.159,92.496,67.190)
O3': (2.103,97.165,69.964)
OP1: (7.313,99.610,68.511)
OP2: (7.844,97.105,68.331)
C4: (4.304,91.368,67.029)
O5': (5.693,98.028,67.512)
C3': (2.719,96.300,69.032)
C1': (2.632,95.206,66.948)
O4': (3.671,96.177,66.905)
C5': (4.896,97.464,68.555)
P: (7.233,98.333,67.760)
O2: (1.188,92.879,66.748)
C4': (3.539,97.082,68.031)
C2': (1.740,95.544,68.147)
O2': (0.645,96.334,67.726)
N1: (3.243,93.860,67.005)
N3: (2.982,91.496,66.881)
N4: (4.817,90.137,67.020)
C6: (4.594,93.709,67.172)
C5: (5.159,92.496,67.190)
O3': (2.103,97.165,69.964)
Image (generated by PyMOL):