ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DS7:A21:A22

Extra

PDB:
ATOM 1 O3' A A 20 -9.263 18.357 -47.155 1.00 21.58 O
ATOM 2 P U A 21 -9.094 19.956 -47.036 1.00 21.76 P
ATOM 3 OP1 U A 21 -9.735 20.496 -48.236 1.00 20.54 O
ATOM 4 OP2 U A 21 -7.602 20.042 -46.851 1.00 22.57 O
ATOM 5 O5' U A 21 -9.913 20.361 -45.747 1.00 20.73 O
ATOM 6 C5' U A 21 -9.272 20.713 -44.528 1.00 19.97 C
ATOM 7 C4' U A 21 -10.129 21.785 -43.862 1.00 20.26 C
ATOM 8 O4' U A 21 -10.195 22.872 -44.775 1.00 19.20 O
ATOM 9 C3' U A 21 -11.560 21.326 -43.583 1.00 18.66 C
ATOM 10 O3' U A 21 -11.961 21.939 -42.353 1.00 16.63 O
ATOM 11 C2' U A 21 -12.404 22.129 -44.548 1.00 20.05 C
ATOM 12 O2' U A 21 -13.613 22.549 -44.043 1.00 20.79 O
ATOM 13 C1' U A 21 -11.504 23.355 -44.819 1.00 20.72 C
ATOM 14 N1 U A 21 -11.712 23.964 -46.140 1.00 18.80 N
ATOM 15 C2 U A 21 -12.230 25.238 -46.176 1.00 17.83 C
ATOM 16 O2 U A 21 -12.569 25.857 -45.176 1.00 16.07 O
ATOM 17 N3 U A 21 -12.337 25.781 -47.428 1.00 18.98 N
ATOM 18 C4 U A 21 -11.991 25.218 -48.627 1.00 17.90 C
ATOM 19 O4 U A 21 -11.940 25.934 -49.599 1.00 18.99 O
ATOM 20 C5 U A 21 -11.495 23.832 -48.535 1.00 18.26 C
ATOM 21 C6 U A 21 -11.384 23.267 -47.317 1.00 16.99 C
ATOM 22 P G A 22 -11.736 21.287 -40.962 1.00 16.51 P
ATOM 23 OP1 G A 22 -12.120 22.281 -39.894 1.00 14.87 O
ATOM 24 OP2 G A 22 -10.467 20.556 -40.859 1.00 17.07 O
ATOM 25 O5' G A 22 -12.919 20.139 -40.935 1.00 15.85 O
TER

ATOM 1 O3' U B 21 -11.961 21.939 -42.353 1.00 16.63 O
ATOM 2 P G B 22 -11.736 21.287 -40.962 1.00 16.51 P
ATOM 3 OP1 G B 22 -12.120 22.281 -39.894 1.00 14.87 O
ATOM 4 OP2 G B 22 -10.467 20.556 -40.859 1.00 17.07 O
ATOM 5 O5' G B 22 -12.919 20.139 -40.935 1.00 15.85 O
ATOM 6 C5' G B 22 -14.273 20.427 -40.669 1.00 14.06 C
ATOM 7 C4' G B 22 -15.110 19.100 -40.625 1.00 15.37 C
ATOM 8 O4' G B 22 -14.920 18.396 -41.862 1.00 15.80 O
ATOM 9 C3' G B 22 -14.607 18.152 -39.591 1.00 14.80 C
ATOM 10 O3' G B 22 -15.174 18.487 -38.340 1.00 12.85 O
ATOM 11 C2' G B 22 -15.065 16.804 -40.143 1.00 13.82 C
ATOM 12 O2' G B 22 -16.449 16.651 -39.945 1.00 13.40 O
ATOM 13 C1' G B 22 -14.772 16.967 -41.607 1.00 16.63 C
ATOM 14 N9 G B 22 -13.408 16.555 -41.979 1.00 16.65 N
ATOM 15 C8 G B 22 -12.277 17.371 -41.927 1.00 19.37 C
ATOM 16 N7 G B 22 -11.193 16.787 -42.378 1.00 18.84 N
ATOM 17 C5 G B 22 -11.612 15.520 -42.764 1.00 17.41 C
ATOM 18 C6 G B 22 -10.869 14.402 -43.304 1.00 18.28 C
ATOM 19 O6 G B 22 -9.685 14.274 -43.518 1.00 14.24 O
ATOM 20 N1 G B 22 -11.683 13.308 -43.538 1.00 16.52 N
ATOM 21 C2 G B 22 -13.008 13.238 -43.245 1.00 19.68 C
ATOM 22 N2 G B 22 -13.577 12.055 -43.610 1.00 18.33 N
ATOM 23 N3 G B 22 -13.727 14.229 -42.662 1.00 17.65 N
ATOM 24 C4 G B 22 -12.974 15.339 -42.480 1.00 18.91 C
ATOM 25 P G B 23 -14.353 18.273 -37.005 1.00 18.08 P
ATOM 26 OP1 G B 23 -15.195 18.820 -35.970 1.00 16.13 O
ATOM 27 OP2 G B 23 -12.933 18.691 -37.121 1.00 16.03 O
ATOM 28 O5' G B 23 -14.337 16.690 -36.875 1.00 16.35 O
TER

Atoms:
C4: (-11.991,25.218,-48.627)
N3: (-12.337,25.781,-47.428)
OP1: (-9.735,20.496,-48.236)
OP2: (-7.602,20.042,-46.851)
C2: (-12.230,25.238,-46.176)
C1': (-11.504,23.355,-44.819)
C3': (-11.560,21.326,-43.583)
O5': (-9.913,20.361,-45.747)
O4': (-10.195,22.872,-44.775)
C5': (-9.272,20.713,-44.528)
P: (-9.094,19.956,-47.036)
C4': (-10.129,21.785,-43.862)
C2': (-12.404,22.129,-44.548)
O2': (-13.613,22.549,-44.043)
N1: (-11.712,23.964,-46.140)
O4: (-11.940,25.934,-49.599)
O2: (-12.569,25.857,-45.176)
C6: (-11.384,23.267,-47.317)
C5: (-11.495,23.832,-48.535)
O3': (-11.961,21.939,-42.353)
OP1: (-12.120,22.281,-39.894)
OP2: (-10.467,20.556,-40.859)
C3': (-14.607,18.152,-39.591)
C1': (-14.772,16.967,-41.607)
C5': (-14.273,20.427,-40.669)
O6: (-9.685,14.274,-43.518)
O4': (-14.920,18.396,-41.862)
C8: (-12.277,17.371,-41.927)
C2: (-13.008,13.238,-43.245)
C6: (-10.869,14.402,-43.304)
C5: (-11.612,15.520,-42.764)
C4: (-12.974,15.339,-42.480)
P: (-11.736,21.287,-40.962)
C4': (-15.110,19.100,-40.625)
C2': (-15.065,16.804,-40.143)
O2': (-16.449,16.651,-39.945)
N1: (-11.683,13.308,-43.538)
N2: (-13.577,12.055,-43.610)
N3: (-13.727,14.229,-42.662)
N7: (-11.193,16.787,-42.378)
N9: (-13.408,16.555,-41.979)
O5': (-12.919,20.139,-40.935)
O3': (-15.174,18.487,-38.340)
Image (generated by PyMOL):
PyMOL image
show in jmol