Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YZ9:C4:D4
Extra
PDB:
ATOM 1 O3' A A 3 30.316 19.177 58.713 1.00 51.87 O
ATOM 2 P C A 4 28.913 19.046 57.940 1.00 54.50 P
ATOM 3 OP1 C A 4 27.838 19.315 58.923 1.00 54.77 O
ATOM 4 OP2 C A 4 28.919 17.765 57.193 1.00 49.62 O
ATOM 5 O5' C A 4 28.955 20.212 56.855 1.00 51.25 O
ATOM 6 C5' C A 4 29.166 21.564 57.240 1.00 44.01 C
ATOM 7 C4' C A 4 29.605 22.381 56.049 1.00 41.19 C
ATOM 8 O4' C A 4 30.833 21.811 55.522 1.00 36.88 O
ATOM 9 C3' C A 4 28.677 22.389 54.840 1.00 38.98 C
ATOM 10 O3' C A 4 27.605 23.315 54.996 1.00 38.60 O
ATOM 11 C2' C A 4 29.634 22.801 53.729 1.00 39.79 C
ATOM 12 O2' C A 4 29.922 24.188 53.751 1.00 39.85 O
ATOM 13 C1' C A 4 30.892 22.018 54.118 1.00 44.60 C
ATOM 14 N1 C A 4 30.996 20.705 53.453 1.00 41.77 N
ATOM 15 C2 C A 4 31.557 20.646 52.172 1.00 44.74 C
ATOM 16 O2 C A 4 31.936 21.699 51.639 1.00 38.82 O
ATOM 17 N3 C A 4 31.671 19.446 51.550 1.00 36.76 N
ATOM 18 C4 C A 4 31.248 18.335 52.161 1.00 42.14 C
ATOM 19 N4 C A 4 31.388 17.171 51.513 1.00 38.85 N
ATOM 20 C5 C A 4 30.666 18.366 53.463 1.00 37.07 C
ATOM 21 C6 C A 4 30.560 19.562 54.067 1.00 38.83 C
ATOM 22 P U A 5 26.294 23.188 54.063 1.00 42.79 P
ATOM 23 OP1 U A 5 25.306 24.205 54.516 1.00 39.39 O
ATOM 24 OP2 U A 5 25.884 21.758 54.004 1.00 42.71 O
ATOM 25 O5' U A 5 26.827 23.592 52.618 1.00 40.02 O
TER
ATOM 1 O3' A B 3 34.455 16.544 40.926 1.00 38.35 O
ATOM 2 P C B 4 35.665 17.096 41.839 1.00 44.17 P
ATOM 3 OP1 C B 4 36.848 17.269 40.962 1.00 48.60 O
ATOM 4 OP2 C B 4 35.771 16.264 43.063 1.00 48.55 O
ATOM 5 O5' C B 4 35.183 18.542 42.308 1.00 45.82 O
ATOM 6 C5' C B 4 34.941 19.572 41.353 1.00 43.61 C
ATOM 7 C4' C B 4 34.548 20.858 42.046 1.00 43.94 C
ATOM 8 O4' C B 4 33.277 20.686 42.731 1.00 34.92 O
ATOM 9 C3' C B 4 35.460 21.337 43.164 1.00 43.87 C
ATOM 10 O3' C B 4 36.638 21.953 42.655 1.00 49.62 O
ATOM 11 C2' C B 4 34.548 22.325 43.882 1.00 48.00 C
ATOM 12 O2' C B 4 34.431 23.557 43.193 1.00 42.37 O
ATOM 13 C1' C B 4 33.208 21.583 43.829 1.00 39.76 C
ATOM 14 N1 C B 4 32.960 20.811 45.056 1.00 43.65 N
ATOM 15 C2 C B 4 32.454 21.483 46.173 1.00 43.42 C
ATOM 16 O2 C B 4 32.188 22.693 46.077 1.00 41.25 O
ATOM 17 N3 C B 4 32.265 20.801 47.326 1.00 41.94 N
ATOM 18 C4 C B 4 32.550 19.498 47.386 1.00 36.20 C
ATOM 19 N4 C B 4 32.364 18.875 48.552 1.00 37.93 N
ATOM 20 C5 C B 4 33.044 18.782 46.256 1.00 36.53 C
ATOM 21 C6 C B 4 33.232 19.471 45.121 1.00 44.24 C
ATOM 22 P U B 5 38.037 21.772 43.439 1.00 49.73 P
ATOM 23 OP1 U B 5 39.081 22.425 42.612 1.00 51.60 O
ATOM 24 OP2 U B 5 38.197 20.348 43.827 1.00 51.40 O
ATOM 25 O5' U B 5 37.843 22.607 44.776 1.00 42.54 O
TER
ATOM 2 P C A 4 28.913 19.046 57.940 1.00 54.50 P
ATOM 3 OP1 C A 4 27.838 19.315 58.923 1.00 54.77 O
ATOM 4 OP2 C A 4 28.919 17.765 57.193 1.00 49.62 O
ATOM 5 O5' C A 4 28.955 20.212 56.855 1.00 51.25 O
ATOM 6 C5' C A 4 29.166 21.564 57.240 1.00 44.01 C
ATOM 7 C4' C A 4 29.605 22.381 56.049 1.00 41.19 C
ATOM 8 O4' C A 4 30.833 21.811 55.522 1.00 36.88 O
ATOM 9 C3' C A 4 28.677 22.389 54.840 1.00 38.98 C
ATOM 10 O3' C A 4 27.605 23.315 54.996 1.00 38.60 O
ATOM 11 C2' C A 4 29.634 22.801 53.729 1.00 39.79 C
ATOM 12 O2' C A 4 29.922 24.188 53.751 1.00 39.85 O
ATOM 13 C1' C A 4 30.892 22.018 54.118 1.00 44.60 C
ATOM 14 N1 C A 4 30.996 20.705 53.453 1.00 41.77 N
ATOM 15 C2 C A 4 31.557 20.646 52.172 1.00 44.74 C
ATOM 16 O2 C A 4 31.936 21.699 51.639 1.00 38.82 O
ATOM 17 N3 C A 4 31.671 19.446 51.550 1.00 36.76 N
ATOM 18 C4 C A 4 31.248 18.335 52.161 1.00 42.14 C
ATOM 19 N4 C A 4 31.388 17.171 51.513 1.00 38.85 N
ATOM 20 C5 C A 4 30.666 18.366 53.463 1.00 37.07 C
ATOM 21 C6 C A 4 30.560 19.562 54.067 1.00 38.83 C
ATOM 22 P U A 5 26.294 23.188 54.063 1.00 42.79 P
ATOM 23 OP1 U A 5 25.306 24.205 54.516 1.00 39.39 O
ATOM 24 OP2 U A 5 25.884 21.758 54.004 1.00 42.71 O
ATOM 25 O5' U A 5 26.827 23.592 52.618 1.00 40.02 O
TER
ATOM 1 O3' A B 3 34.455 16.544 40.926 1.00 38.35 O
ATOM 2 P C B 4 35.665 17.096 41.839 1.00 44.17 P
ATOM 3 OP1 C B 4 36.848 17.269 40.962 1.00 48.60 O
ATOM 4 OP2 C B 4 35.771 16.264 43.063 1.00 48.55 O
ATOM 5 O5' C B 4 35.183 18.542 42.308 1.00 45.82 O
ATOM 6 C5' C B 4 34.941 19.572 41.353 1.00 43.61 C
ATOM 7 C4' C B 4 34.548 20.858 42.046 1.00 43.94 C
ATOM 8 O4' C B 4 33.277 20.686 42.731 1.00 34.92 O
ATOM 9 C3' C B 4 35.460 21.337 43.164 1.00 43.87 C
ATOM 10 O3' C B 4 36.638 21.953 42.655 1.00 49.62 O
ATOM 11 C2' C B 4 34.548 22.325 43.882 1.00 48.00 C
ATOM 12 O2' C B 4 34.431 23.557 43.193 1.00 42.37 O
ATOM 13 C1' C B 4 33.208 21.583 43.829 1.00 39.76 C
ATOM 14 N1 C B 4 32.960 20.811 45.056 1.00 43.65 N
ATOM 15 C2 C B 4 32.454 21.483 46.173 1.00 43.42 C
ATOM 16 O2 C B 4 32.188 22.693 46.077 1.00 41.25 O
ATOM 17 N3 C B 4 32.265 20.801 47.326 1.00 41.94 N
ATOM 18 C4 C B 4 32.550 19.498 47.386 1.00 36.20 C
ATOM 19 N4 C B 4 32.364 18.875 48.552 1.00 37.93 N
ATOM 20 C5 C B 4 33.044 18.782 46.256 1.00 36.53 C
ATOM 21 C6 C B 4 33.232 19.471 45.121 1.00 44.24 C
ATOM 22 P U B 5 38.037 21.772 43.439 1.00 49.73 P
ATOM 23 OP1 U B 5 39.081 22.425 42.612 1.00 51.60 O
ATOM 24 OP2 U B 5 38.197 20.348 43.827 1.00 51.40 O
ATOM 25 O5' U B 5 37.843 22.607 44.776 1.00 42.54 O
TER
Atoms:
C2: (31.557,20.646,52.172)
OP1: (27.838,19.315,58.923)
OP2: (28.919,17.765,57.193)
C4: (31.248,18.335,52.161)
O5': (28.955,20.212,56.855)
C3': (28.677,22.389,54.840)
C1': (30.892,22.018,54.118)
O4': (30.833,21.811,55.522)
C5': (29.166,21.564,57.240)
P: (28.913,19.046,57.940)
O2: (31.936,21.699,51.639)
C4': (29.605,22.381,56.049)
C2': (29.634,22.801,53.729)
O2': (29.922,24.188,53.751)
N1: (30.996,20.705,53.453)
N3: (31.671,19.446,51.550)
N4: (31.388,17.171,51.513)
C6: (30.560,19.562,54.067)
C5: (30.666,18.366,53.463)
O3': (27.605,23.315,54.996)
OP1: (27.838,19.315,58.923)
OP2: (28.919,17.765,57.193)
C4: (31.248,18.335,52.161)
O5': (28.955,20.212,56.855)
C3': (28.677,22.389,54.840)
C1': (30.892,22.018,54.118)
O4': (30.833,21.811,55.522)
C5': (29.166,21.564,57.240)
P: (28.913,19.046,57.940)
O2: (31.936,21.699,51.639)
C4': (29.605,22.381,56.049)
C2': (29.634,22.801,53.729)
O2': (29.922,24.188,53.751)
N1: (30.996,20.705,53.453)
N3: (31.671,19.446,51.550)
N4: (31.388,17.171,51.513)
C6: (30.560,19.562,54.067)
C5: (30.666,18.366,53.463)
O3': (27.605,23.315,54.996)
C2: (32.454,21.483,46.173)
OP1: (36.848,17.269,40.962)
OP2: (35.771,16.264,43.063)
C4: (32.550,19.498,47.386)
O5': (35.183,18.542,42.308)
C3': (35.460,21.337,43.164)
C1': (33.208,21.583,43.829)
O4': (33.277,20.686,42.731)
C5': (34.941,19.572,41.353)
P: (35.665,17.096,41.839)
O2: (32.188,22.693,46.077)
C4': (34.548,20.858,42.046)
C2': (34.548,22.325,43.882)
O2': (34.431,23.557,43.193)
N1: (32.960,20.811,45.056)
N3: (32.265,20.801,47.326)
N4: (32.364,18.875,48.552)
C6: (33.232,19.471,45.121)
C5: (33.044,18.782,46.256)
O3': (36.638,21.953,42.655)
OP1: (36.848,17.269,40.962)
OP2: (35.771,16.264,43.063)
C4: (32.550,19.498,47.386)
O5': (35.183,18.542,42.308)
C3': (35.460,21.337,43.164)
C1': (33.208,21.583,43.829)
O4': (33.277,20.686,42.731)
C5': (34.941,19.572,41.353)
P: (35.665,17.096,41.839)
O2: (32.188,22.693,46.077)
C4': (34.548,20.858,42.046)
C2': (34.548,22.325,43.882)
O2': (34.431,23.557,43.193)
N1: (32.960,20.811,45.056)
N3: (32.265,20.801,47.326)
N4: (32.364,18.875,48.552)
C6: (33.232,19.471,45.121)
C5: (33.044,18.782,46.256)
O3': (36.638,21.953,42.655)
Image (generated by PyMOL):