Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61628:61629
Extra
PDB:
ATOM 1 O3' A A1627 245.030 -5.867 252.136 1.00 54.07 O
ATOM 2 P C A1628 244.480 -5.908 253.626 1.00 89.14 P
ATOM 3 OP1 C A1628 243.529 -4.806 253.768 1.00 89.24 O
ATOM 4 OP2 C A1628 245.653 -5.944 254.504 1.00 89.30 O
ATOM 5 O5' C A1628 243.717 -7.296 253.695 1.00 89.07 O
ATOM 6 C5' C A1628 243.834 -8.124 254.846 1.00 89.22 C
ATOM 7 C4' C A1628 242.543 -8.828 255.179 1.00 89.25 C
ATOM 8 O4' C A1628 241.776 -8.031 256.115 1.00 89.49 O
ATOM 9 C3' C A1628 241.624 -9.092 254.005 1.00 89.07 C
ATOM 10 O3' C A1628 240.950 -10.313 254.222 1.00 89.08 O
ATOM 11 C2' C A1628 240.624 -7.948 254.078 1.00 89.19 C
ATOM 12 O2' C A1628 239.383 -8.232 253.471 1.00 89.15 O
ATOM 13 C1' C A1628 240.495 -7.756 255.582 1.00 89.47 C
ATOM 14 N1 C A1628 240.124 -6.385 256.016 1.00 89.67 N
ATOM 15 C2 C A1628 239.307 -5.402 255.355 1.00 89.67 C
ATOM 16 O2 C A1628 238.772 -5.540 254.201 1.00 89.48 O
ATOM 17 N3 C A1628 239.111 -4.213 256.027 1.00 89.91 N
ATOM 18 C4 C A1628 239.636 -3.958 257.246 1.00 90.15 C
ATOM 19 N4 C A1628 239.405 -2.764 257.829 1.00 90.41 N
ATOM 20 C5 C A1628 240.432 -4.938 257.917 1.00 90.16 C
ATOM 21 C6 C A1628 240.625 -6.098 257.265 1.00 89.91 C
ATOM 22 P A A1629 241.085 -11.482 253.142 1.00 67.22 P
ATOM 23 OP1 A A1629 239.732 -12.132 253.035 1.00 67.25 O
ATOM 24 OP2 A A1629 242.261 -12.313 253.534 1.00 67.21 O
ATOM 25 O5' A A1629 241.416 -10.679 251.810 1.00 67.05 O
TER
ATOM 1 O3' C B1628 240.950 -10.313 254.222 1.00 89.08 O
ATOM 2 P A B1629 241.085 -11.482 253.142 1.00 67.22 P
ATOM 3 OP1 A B1629 239.732 -12.132 253.035 1.00 67.25 O
ATOM 4 OP2 A B1629 242.261 -12.313 253.534 1.00 67.21 O
ATOM 5 O5' A B1629 241.416 -10.679 251.810 1.00 67.05 O
ATOM 6 C5' A B1629 240.788 -10.993 250.589 1.00 66.91 C
ATOM 7 C4' A B1629 241.675 -10.644 249.438 1.00 66.75 C
ATOM 8 O4' A B1629 242.713 -9.737 249.880 1.00 66.80 O
ATOM 9 C3' A B1629 242.439 -11.787 248.850 1.00 66.65 C
ATOM 10 O3' A B1629 241.664 -12.568 248.002 1.00 66.58 O
ATOM 11 C2' A B1629 243.604 -11.099 248.162 1.00 66.59 C
ATOM 12 O2' A B1629 243.213 -10.551 246.914 1.00 66.48 O
ATOM 13 C1' A B1629 243.896 -9.968 249.152 1.00 66.71 C
ATOM 14 N9 A B1629 244.941 -10.361 250.108 1.00 66.83 N
ATOM 15 C8 A B1629 244.750 -10.810 251.385 1.00 66.96 C
ATOM 16 N7 A B1629 245.857 -11.136 252.009 1.00 67.06 N
ATOM 17 C5 A B1629 246.835 -10.911 251.071 1.00 66.99 C
ATOM 18 C6 A B1629 248.216 -11.085 251.115 1.00 67.08 C
ATOM 19 N6 A B1629 248.890 -11.536 252.175 1.00 67.24 N
ATOM 20 N1 A B1629 248.892 -10.761 250.007 1.00 67.01 N
ATOM 21 C2 A B1629 248.230 -10.297 248.954 1.00 66.87 C
ATOM 22 N3 A B1629 246.933 -10.116 248.793 1.00 66.77 N
ATOM 23 C4 A B1629 246.287 -10.442 249.901 1.00 66.85 C
ATOM 24 P C B1630 241.963 -14.125 247.898 1.00 63.26 P
ATOM 25 OP1 C B1630 242.040 -14.648 249.284 1.00 63.73 O
ATOM 26 OP2 C B1630 243.139 -14.282 246.999 1.00 63.69 O
ATOM 27 O5' C B1630 240.651 -14.672 247.203 1.00 62.90 O
TER
ATOM 2 P C A1628 244.480 -5.908 253.626 1.00 89.14 P
ATOM 3 OP1 C A1628 243.529 -4.806 253.768 1.00 89.24 O
ATOM 4 OP2 C A1628 245.653 -5.944 254.504 1.00 89.30 O
ATOM 5 O5' C A1628 243.717 -7.296 253.695 1.00 89.07 O
ATOM 6 C5' C A1628 243.834 -8.124 254.846 1.00 89.22 C
ATOM 7 C4' C A1628 242.543 -8.828 255.179 1.00 89.25 C
ATOM 8 O4' C A1628 241.776 -8.031 256.115 1.00 89.49 O
ATOM 9 C3' C A1628 241.624 -9.092 254.005 1.00 89.07 C
ATOM 10 O3' C A1628 240.950 -10.313 254.222 1.00 89.08 O
ATOM 11 C2' C A1628 240.624 -7.948 254.078 1.00 89.19 C
ATOM 12 O2' C A1628 239.383 -8.232 253.471 1.00 89.15 O
ATOM 13 C1' C A1628 240.495 -7.756 255.582 1.00 89.47 C
ATOM 14 N1 C A1628 240.124 -6.385 256.016 1.00 89.67 N
ATOM 15 C2 C A1628 239.307 -5.402 255.355 1.00 89.67 C
ATOM 16 O2 C A1628 238.772 -5.540 254.201 1.00 89.48 O
ATOM 17 N3 C A1628 239.111 -4.213 256.027 1.00 89.91 N
ATOM 18 C4 C A1628 239.636 -3.958 257.246 1.00 90.15 C
ATOM 19 N4 C A1628 239.405 -2.764 257.829 1.00 90.41 N
ATOM 20 C5 C A1628 240.432 -4.938 257.917 1.00 90.16 C
ATOM 21 C6 C A1628 240.625 -6.098 257.265 1.00 89.91 C
ATOM 22 P A A1629 241.085 -11.482 253.142 1.00 67.22 P
ATOM 23 OP1 A A1629 239.732 -12.132 253.035 1.00 67.25 O
ATOM 24 OP2 A A1629 242.261 -12.313 253.534 1.00 67.21 O
ATOM 25 O5' A A1629 241.416 -10.679 251.810 1.00 67.05 O
TER
ATOM 1 O3' C B1628 240.950 -10.313 254.222 1.00 89.08 O
ATOM 2 P A B1629 241.085 -11.482 253.142 1.00 67.22 P
ATOM 3 OP1 A B1629 239.732 -12.132 253.035 1.00 67.25 O
ATOM 4 OP2 A B1629 242.261 -12.313 253.534 1.00 67.21 O
ATOM 5 O5' A B1629 241.416 -10.679 251.810 1.00 67.05 O
ATOM 6 C5' A B1629 240.788 -10.993 250.589 1.00 66.91 C
ATOM 7 C4' A B1629 241.675 -10.644 249.438 1.00 66.75 C
ATOM 8 O4' A B1629 242.713 -9.737 249.880 1.00 66.80 O
ATOM 9 C3' A B1629 242.439 -11.787 248.850 1.00 66.65 C
ATOM 10 O3' A B1629 241.664 -12.568 248.002 1.00 66.58 O
ATOM 11 C2' A B1629 243.604 -11.099 248.162 1.00 66.59 C
ATOM 12 O2' A B1629 243.213 -10.551 246.914 1.00 66.48 O
ATOM 13 C1' A B1629 243.896 -9.968 249.152 1.00 66.71 C
ATOM 14 N9 A B1629 244.941 -10.361 250.108 1.00 66.83 N
ATOM 15 C8 A B1629 244.750 -10.810 251.385 1.00 66.96 C
ATOM 16 N7 A B1629 245.857 -11.136 252.009 1.00 67.06 N
ATOM 17 C5 A B1629 246.835 -10.911 251.071 1.00 66.99 C
ATOM 18 C6 A B1629 248.216 -11.085 251.115 1.00 67.08 C
ATOM 19 N6 A B1629 248.890 -11.536 252.175 1.00 67.24 N
ATOM 20 N1 A B1629 248.892 -10.761 250.007 1.00 67.01 N
ATOM 21 C2 A B1629 248.230 -10.297 248.954 1.00 66.87 C
ATOM 22 N3 A B1629 246.933 -10.116 248.793 1.00 66.77 N
ATOM 23 C4 A B1629 246.287 -10.442 249.901 1.00 66.85 C
ATOM 24 P C B1630 241.963 -14.125 247.898 1.00 63.26 P
ATOM 25 OP1 C B1630 242.040 -14.648 249.284 1.00 63.73 O
ATOM 26 OP2 C B1630 243.139 -14.282 246.999 1.00 63.69 O
ATOM 27 O5' C B1630 240.651 -14.672 247.203 1.00 62.90 O
TER
Atoms:
C2: (239.307,-5.402,255.355)
OP1: (243.529,-4.806,253.768)
OP2: (245.653,-5.944,254.504)
C4: (239.636,-3.958,257.246)
O5': (243.717,-7.296,253.695)
C3': (241.624,-9.092,254.005)
C1': (240.495,-7.756,255.582)
O4': (241.776,-8.031,256.115)
C5': (243.834,-8.124,254.846)
P: (244.480,-5.908,253.626)
O2: (238.772,-5.540,254.201)
C4': (242.543,-8.828,255.179)
C2': (240.624,-7.948,254.078)
O2': (239.383,-8.232,253.471)
N1: (240.124,-6.385,256.016)
N3: (239.111,-4.213,256.027)
N4: (239.405,-2.764,257.829)
C6: (240.625,-6.098,257.265)
C5: (240.432,-4.938,257.917)
O3': (240.950,-10.313,254.222)
OP1: (243.529,-4.806,253.768)
OP2: (245.653,-5.944,254.504)
C4: (239.636,-3.958,257.246)
O5': (243.717,-7.296,253.695)
C3': (241.624,-9.092,254.005)
C1': (240.495,-7.756,255.582)
O4': (241.776,-8.031,256.115)
C5': (243.834,-8.124,254.846)
P: (244.480,-5.908,253.626)
O2: (238.772,-5.540,254.201)
C4': (242.543,-8.828,255.179)
C2': (240.624,-7.948,254.078)
O2': (239.383,-8.232,253.471)
N1: (240.124,-6.385,256.016)
N3: (239.111,-4.213,256.027)
N4: (239.405,-2.764,257.829)
C6: (240.625,-6.098,257.265)
C5: (240.432,-4.938,257.917)
O3': (240.950,-10.313,254.222)
OP1: (239.732,-12.132,253.035)
OP2: (242.261,-12.313,253.534)
C3': (242.439,-11.787,248.850)
C1': (243.896,-9.968,249.152)
C5': (240.788,-10.993,250.589)
O4': (242.713,-9.737,249.880)
C8: (244.750,-10.810,251.385)
O2': (243.213,-10.551,246.914)
C6: (248.216,-11.085,251.115)
C5: (246.835,-10.911,251.071)
C4: (246.287,-10.442,249.901)
P: (241.085,-11.482,253.142)
C4': (241.675,-10.644,249.438)
C2': (243.604,-11.099,248.162)
C2: (248.230,-10.297,248.954)
N1: (248.892,-10.761,250.007)
N3: (246.933,-10.116,248.793)
N6: (248.890,-11.536,252.175)
N7: (245.857,-11.136,252.009)
N9: (244.941,-10.361,250.108)
O5': (241.416,-10.679,251.810)
O3': (241.664,-12.568,248.002)
OP2: (242.261,-12.313,253.534)
C3': (242.439,-11.787,248.850)
C1': (243.896,-9.968,249.152)
C5': (240.788,-10.993,250.589)
O4': (242.713,-9.737,249.880)
C8: (244.750,-10.810,251.385)
O2': (243.213,-10.551,246.914)
C6: (248.216,-11.085,251.115)
C5: (246.835,-10.911,251.071)
C4: (246.287,-10.442,249.901)
P: (241.085,-11.482,253.142)
C4': (241.675,-10.644,249.438)
C2': (243.604,-11.099,248.162)
C2: (248.230,-10.297,248.954)
N1: (248.892,-10.761,250.007)
N3: (246.933,-10.116,248.793)
N6: (248.890,-11.536,252.175)
N7: (245.857,-11.136,252.009)
N9: (244.941,-10.361,250.108)
O5': (241.416,-10.679,251.810)
O3': (241.664,-12.568,248.002)
Image (generated by PyMOL):