ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01061:01206

Extra

PDB:
ATOM 1 O3' U A1060 18.542 105.271 123.773 1.00 40.37 O
ATOM 2 P C A1061 18.846 104.939 125.314 1.00 41.23 P
ATOM 3 OP1 C A1061 20.232 104.424 125.418 1.00 41.49 O
ATOM 4 OP2 C A1061 17.717 104.091 125.784 1.00 41.40 O
ATOM 5 O5' C A1061 18.798 106.358 126.039 1.00 38.43 O
ATOM 6 C5' C A1061 17.579 106.857 126.627 1.00 38.48 C
ATOM 7 C4' C A1061 17.720 108.324 126.951 1.00 37.68 C
ATOM 8 O4' C A1061 18.819 108.498 127.880 1.00 37.50 O
ATOM 9 C3' C A1061 18.094 109.208 125.774 1.00 38.20 C
ATOM 10 O3' C A1061 16.961 109.594 125.014 1.00 39.32 O
ATOM 11 C2' C A1061 18.772 110.389 126.449 1.00 37.62 C
ATOM 12 O2' C A1061 17.857 111.305 127.008 1.00 38.34 O
ATOM 13 C1' C A1061 19.534 109.684 127.570 1.00 36.06 C
ATOM 14 N1 C A1061 20.905 109.308 127.184 1.00 34.26 N
ATOM 15 C2 C A1061 21.897 110.286 127.187 1.00 33.19 C
ATOM 16 O2 C A1061 21.594 111.446 127.489 1.00 32.38 O
ATOM 17 N3 C A1061 23.162 109.942 126.860 1.00 33.70 N
ATOM 18 C4 C A1061 23.450 108.678 126.543 1.00 33.32 C
ATOM 19 N4 C A1061 24.714 108.376 126.251 1.00 32.52 N
ATOM 20 C5 C A1061 22.454 107.666 126.517 1.00 33.61 C
ATOM 21 C6 C A1061 21.208 108.021 126.838 1.00 34.02 C
ATOM 22 P C A1062 17.159 110.103 123.509 1.00 40.94 P
ATOM 23 OP1 C A1062 15.811 110.302 122.910 1.00 40.16 O
ATOM 24 OP2 C A1062 18.132 109.183 122.853 1.00 40.48 O
ATOM 25 O5' C A1062 17.841 111.531 123.679 1.00 37.68 O
TER

ATOM 1 O3' A B1205 22.253 104.236 133.279 1.00 43.46 O
ATOM 2 P A B1206 20.819 104.422 132.592 1.00 44.53 P
ATOM 3 OP1 A B1206 20.182 105.598 133.249 1.00 44.07 O
ATOM 4 OP2 A B1206 20.110 103.114 132.570 1.00 41.47 O
ATOM 5 O5' A B1206 21.181 104.833 131.095 1.00 41.97 O
ATOM 6 C5' A B1206 21.651 103.856 130.143 1.00 38.18 C
ATOM 7 C4' A B1206 22.973 104.290 129.558 1.00 35.58 C
ATOM 8 O4' A B1206 22.857 105.673 129.136 1.00 34.65 O
ATOM 9 C3' A B1206 24.169 104.247 130.501 1.00 34.56 C
ATOM 10 O3' A B1206 25.339 104.057 129.727 1.00 35.09 O
ATOM 11 C2' A B1206 24.207 105.659 131.054 1.00 34.77 C
ATOM 12 O2' A B1206 25.507 106.020 131.466 1.00 34.54 O
ATOM 13 C1' A B1206 23.800 106.462 129.823 1.00 35.01 C
ATOM 14 N9 A B1206 23.170 107.737 130.136 1.00 35.95 N
ATOM 15 C8 A B1206 21.899 107.955 130.599 1.00 36.60 C
ATOM 16 N7 A B1206 21.608 109.221 130.766 1.00 38.77 N
ATOM 17 C5 A B1206 22.771 109.882 130.395 1.00 38.80 C
ATOM 18 C6 A B1206 23.108 111.243 130.343 1.00 38.76 C
ATOM 19 N6 A B1206 22.275 112.223 130.698 1.00 39.08 N
ATOM 20 N1 A B1206 24.350 111.567 129.912 1.00 38.19 N
ATOM 21 C2 A B1206 25.189 110.583 129.571 1.00 37.42 C
ATOM 22 N3 A B1206 24.990 109.267 129.586 1.00 39.05 N
ATOM 23 C4 A B1206 23.744 108.979 130.008 1.00 38.31 C
ATOM 24 P A B1207 25.799 102.582 129.326 1.00 36.99 P
ATOM 25 OP1 A B1207 26.217 102.642 127.901 1.00 36.69 O
ATOM 26 OP2 A B1207 24.742 101.631 129.731 1.00 37.33 O
ATOM 27 O5' A B1207 27.092 102.336 130.226 1.00 38.06 O
TER

Atoms:
C2: (21.897,110.286,127.187)
OP1: (20.232,104.424,125.418)
OP2: (17.717,104.091,125.784)
C4: (23.450,108.678,126.543)
O5': (18.798,106.358,126.039)
C3': (18.094,109.208,125.774)
C1': (19.534,109.684,127.570)
O4': (18.819,108.498,127.880)
C5': (17.579,106.857,126.627)
P: (18.846,104.939,125.314)
O2: (21.594,111.446,127.489)
C4': (17.720,108.324,126.951)
C2': (18.772,110.389,126.449)
O2': (17.857,111.305,127.008)
N1: (20.905,109.308,127.184)
N3: (23.162,109.942,126.860)
N4: (24.714,108.376,126.251)
C6: (21.208,108.021,126.838)
C5: (22.454,107.666,126.517)
O3': (16.961,109.594,125.014)
OP1: (20.182,105.598,133.249)
OP2: (20.110,103.114,132.570)
C3': (24.169,104.247,130.501)
C1': (23.800,106.462,129.823)
C5': (21.651,103.856,130.143)
O4': (22.857,105.673,129.136)
C8: (21.899,107.955,130.599)
O2': (25.507,106.020,131.466)
C6: (23.108,111.243,130.343)
C5: (22.771,109.882,130.395)
C4: (23.744,108.979,130.008)
P: (20.819,104.422,132.592)
C4': (22.973,104.290,129.558)
C2': (24.207,105.659,131.054)
C2: (25.189,110.583,129.571)
N1: (24.350,111.567,129.912)
N3: (24.990,109.267,129.586)
N6: (22.275,112.223,130.698)
N7: (21.608,109.221,130.766)
N9: (23.170,107.737,130.136)
O5': (21.181,104.833,131.095)
O3': (25.339,104.057,129.727)
Image (generated by PyMOL):
PyMOL image
show in jmol