Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1234:A1240
Extra
PDB:
ATOM 1 O3' A A1233 5.249 79.895 68.493 1.00 53.11 O
ATOM 2 P C A1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 3 OP1 C A1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 4 OP2 C A1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 5 O5' C A1234 4.822 81.341 66.513 1.00 55.17 O
ATOM 6 C5' C A1234 3.382 81.343 66.448 1.00 56.13 C
ATOM 7 C4' C A1234 2.841 82.718 66.120 1.00 57.30 C
ATOM 8 O4' C A1234 3.113 83.657 67.180 1.00 56.74 O
ATOM 9 C3' C A1234 3.410 83.401 64.901 1.00 57.69 C
ATOM 10 O3' C A1234 2.838 82.905 63.738 1.00 60.73 O
ATOM 11 C2' C A1234 3.034 84.852 65.120 1.00 57.09 C
ATOM 12 O2' C A1234 1.717 85.192 64.750 1.00 56.28 O
ATOM 13 C1' C A1234 3.240 84.962 66.626 1.00 57.77 C
ATOM 14 N1 C A1234 4.605 85.418 66.861 1.00 58.71 N
ATOM 15 C2 C A1234 4.840 86.780 66.949 1.00 58.68 C
ATOM 16 O2 C A1234 3.880 87.561 66.825 1.00 60.12 O
ATOM 17 N3 C A1234 6.091 87.215 67.161 1.00 58.31 N
ATOM 18 C4 C A1234 7.086 86.337 67.289 1.00 58.70 C
ATOM 19 N4 C A1234 8.307 86.807 67.530 1.00 59.50 N
ATOM 20 C5 C A1234 6.874 84.937 67.189 1.00 58.74 C
ATOM 21 C6 C A1234 5.632 84.524 66.980 1.00 58.97 C
ATOM 22 P U A1235 3.764 82.668 62.482 1.00 63.13 P
ATOM 23 OP1 U A1235 2.865 82.081 61.461 1.00 65.27 O
ATOM 24 OP2 U A1235 4.950 81.908 62.957 1.00 62.39 O
ATOM 25 O5' U A1235 4.210 84.144 62.085 1.00 63.04 O
TER
ATOM 1 O3' A B1239 8.121 98.589 66.795 1.00 95.54 O
ATOM 2 P C B1240 7.491 98.306 68.258 1.00 94.76 P
ATOM 3 OP1 C B1240 7.540 99.570 69.038 1.00 95.47 O
ATOM 4 OP2 C B1240 8.052 97.057 68.844 1.00 94.18 O
ATOM 5 O5' C B1240 5.954 98.033 67.962 1.00 92.22 O
ATOM 6 C5' C B1240 5.113 97.478 68.967 1.00 87.44 C
ATOM 7 C4' C B1240 3.790 97.072 68.378 1.00 84.57 C
ATOM 8 O4' C B1240 3.986 96.165 67.263 1.00 83.05 O
ATOM 9 C3' C B1240 2.968 96.274 69.357 1.00 83.25 C
ATOM 10 O3' C B1240 2.317 97.132 70.250 1.00 81.82 O
ATOM 11 C2' C B1240 2.051 95.457 68.462 1.00 82.94 C
ATOM 12 O2' C B1240 0.912 96.178 68.017 1.00 82.46 O
ATOM 13 C1' C B1240 2.998 95.140 67.298 1.00 82.58 C
ATOM 14 N1 C B1240 3.691 93.836 67.380 1.00 80.88 N
ATOM 15 C2 C B1240 2.954 92.646 67.239 1.00 80.80 C
ATOM 16 O2 C B1240 1.718 92.705 67.115 1.00 81.76 O
ATOM 17 N3 C B1240 3.611 91.462 67.247 1.00 80.50 N
ATOM 18 C4 C B1240 4.940 91.432 67.402 1.00 80.30 C
ATOM 19 N4 C B1240 5.550 90.245 67.380 1.00 80.00 N
ATOM 20 C5 C B1240 5.704 92.619 67.579 1.00 80.22 C
ATOM 21 C6 C B1240 5.046 93.786 67.564 1.00 80.49 C
ATOM 22 P U B1241 2.475 96.865 71.809 1.00 81.45 P
ATOM 23 OP1 U B1241 1.660 97.907 72.483 1.00 82.49 O
ATOM 24 OP2 U B1241 3.929 96.780 72.092 1.00 79.61 O
ATOM 25 O5' U B1241 1.792 95.424 71.987 1.00 80.10 O
TER
ATOM 2 P C A1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 3 OP1 C A1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 4 OP2 C A1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 5 O5' C A1234 4.822 81.341 66.513 1.00 55.17 O
ATOM 6 C5' C A1234 3.382 81.343 66.448 1.00 56.13 C
ATOM 7 C4' C A1234 2.841 82.718 66.120 1.00 57.30 C
ATOM 8 O4' C A1234 3.113 83.657 67.180 1.00 56.74 O
ATOM 9 C3' C A1234 3.410 83.401 64.901 1.00 57.69 C
ATOM 10 O3' C A1234 2.838 82.905 63.738 1.00 60.73 O
ATOM 11 C2' C A1234 3.034 84.852 65.120 1.00 57.09 C
ATOM 12 O2' C A1234 1.717 85.192 64.750 1.00 56.28 O
ATOM 13 C1' C A1234 3.240 84.962 66.626 1.00 57.77 C
ATOM 14 N1 C A1234 4.605 85.418 66.861 1.00 58.71 N
ATOM 15 C2 C A1234 4.840 86.780 66.949 1.00 58.68 C
ATOM 16 O2 C A1234 3.880 87.561 66.825 1.00 60.12 O
ATOM 17 N3 C A1234 6.091 87.215 67.161 1.00 58.31 N
ATOM 18 C4 C A1234 7.086 86.337 67.289 1.00 58.70 C
ATOM 19 N4 C A1234 8.307 86.807 67.530 1.00 59.50 N
ATOM 20 C5 C A1234 6.874 84.937 67.189 1.00 58.74 C
ATOM 21 C6 C A1234 5.632 84.524 66.980 1.00 58.97 C
ATOM 22 P U A1235 3.764 82.668 62.482 1.00 63.13 P
ATOM 23 OP1 U A1235 2.865 82.081 61.461 1.00 65.27 O
ATOM 24 OP2 U A1235 4.950 81.908 62.957 1.00 62.39 O
ATOM 25 O5' U A1235 4.210 84.144 62.085 1.00 63.04 O
TER
ATOM 1 O3' A B1239 8.121 98.589 66.795 1.00 95.54 O
ATOM 2 P C B1240 7.491 98.306 68.258 1.00 94.76 P
ATOM 3 OP1 C B1240 7.540 99.570 69.038 1.00 95.47 O
ATOM 4 OP2 C B1240 8.052 97.057 68.844 1.00 94.18 O
ATOM 5 O5' C B1240 5.954 98.033 67.962 1.00 92.22 O
ATOM 6 C5' C B1240 5.113 97.478 68.967 1.00 87.44 C
ATOM 7 C4' C B1240 3.790 97.072 68.378 1.00 84.57 C
ATOM 8 O4' C B1240 3.986 96.165 67.263 1.00 83.05 O
ATOM 9 C3' C B1240 2.968 96.274 69.357 1.00 83.25 C
ATOM 10 O3' C B1240 2.317 97.132 70.250 1.00 81.82 O
ATOM 11 C2' C B1240 2.051 95.457 68.462 1.00 82.94 C
ATOM 12 O2' C B1240 0.912 96.178 68.017 1.00 82.46 O
ATOM 13 C1' C B1240 2.998 95.140 67.298 1.00 82.58 C
ATOM 14 N1 C B1240 3.691 93.836 67.380 1.00 80.88 N
ATOM 15 C2 C B1240 2.954 92.646 67.239 1.00 80.80 C
ATOM 16 O2 C B1240 1.718 92.705 67.115 1.00 81.76 O
ATOM 17 N3 C B1240 3.611 91.462 67.247 1.00 80.50 N
ATOM 18 C4 C B1240 4.940 91.432 67.402 1.00 80.30 C
ATOM 19 N4 C B1240 5.550 90.245 67.380 1.00 80.00 N
ATOM 20 C5 C B1240 5.704 92.619 67.579 1.00 80.22 C
ATOM 21 C6 C B1240 5.046 93.786 67.564 1.00 80.49 C
ATOM 22 P U B1241 2.475 96.865 71.809 1.00 81.45 P
ATOM 23 OP1 U B1241 1.660 97.907 72.483 1.00 82.49 O
ATOM 24 OP2 U B1241 3.929 96.780 72.092 1.00 79.61 O
ATOM 25 O5' U B1241 1.792 95.424 71.987 1.00 80.10 O
TER
Atoms:
C2: (4.840,86.780,66.949)
OP1: (4.988,78.829,66.307)
OP2: (7.063,80.233,66.829)
C4: (7.086,86.337,67.289)
O5': (4.822,81.341,66.513)
C3': (3.410,83.401,64.901)
C1': (3.240,84.962,66.626)
O4': (3.113,83.657,67.180)
C5': (3.382,81.343,66.448)
P: (5.598,80.015,66.944)
O2: (3.880,87.561,66.825)
C4': (2.841,82.718,66.120)
C2': (3.034,84.852,65.120)
O2': (1.717,85.192,64.750)
N1: (4.605,85.418,66.861)
N3: (6.091,87.215,67.161)
N4: (8.307,86.807,67.530)
C6: (5.632,84.524,66.980)
C5: (6.874,84.937,67.189)
O3': (2.838,82.905,63.738)
OP1: (4.988,78.829,66.307)
OP2: (7.063,80.233,66.829)
C4: (7.086,86.337,67.289)
O5': (4.822,81.341,66.513)
C3': (3.410,83.401,64.901)
C1': (3.240,84.962,66.626)
O4': (3.113,83.657,67.180)
C5': (3.382,81.343,66.448)
P: (5.598,80.015,66.944)
O2: (3.880,87.561,66.825)
C4': (2.841,82.718,66.120)
C2': (3.034,84.852,65.120)
O2': (1.717,85.192,64.750)
N1: (4.605,85.418,66.861)
N3: (6.091,87.215,67.161)
N4: (8.307,86.807,67.530)
C6: (5.632,84.524,66.980)
C5: (6.874,84.937,67.189)
O3': (2.838,82.905,63.738)
C2: (2.954,92.646,67.239)
OP1: (7.540,99.570,69.038)
OP2: (8.052,97.057,68.844)
C4: (4.940,91.432,67.402)
O5': (5.954,98.033,67.962)
C3': (2.968,96.274,69.357)
C1': (2.998,95.140,67.298)
O4': (3.986,96.165,67.263)
C5': (5.113,97.478,68.967)
P: (7.491,98.306,68.258)
O2: (1.718,92.705,67.115)
C4': (3.790,97.072,68.378)
C2': (2.051,95.457,68.462)
O2': (0.912,96.178,68.017)
N1: (3.691,93.836,67.380)
N3: (3.611,91.462,67.247)
N4: (5.550,90.245,67.380)
C6: (5.046,93.786,67.564)
C5: (5.704,92.619,67.579)
O3': (2.317,97.132,70.250)
OP1: (7.540,99.570,69.038)
OP2: (8.052,97.057,68.844)
C4: (4.940,91.432,67.402)
O5': (5.954,98.033,67.962)
C3': (2.968,96.274,69.357)
C1': (2.998,95.140,67.298)
O4': (3.986,96.165,67.263)
C5': (5.113,97.478,68.967)
P: (7.491,98.306,68.258)
O2: (1.718,92.705,67.115)
C4': (3.790,97.072,68.378)
C2': (2.051,95.457,68.462)
O2': (0.912,96.178,68.017)
N1: (3.691,93.836,67.380)
N3: (3.611,91.462,67.247)
N4: (5.550,90.245,67.380)
C6: (5.046,93.786,67.564)
C5: (5.704,92.619,67.579)
O3': (2.317,97.132,70.250)
Image (generated by PyMOL):