ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1745:A1746

Extra

PDB:
ATOM 1 O3' A A1744 57.136 0.725 -29.041 1.00 34.67 O
ATOM 2 P U A1745 57.741 0.056 -27.722 1.00 44.70 P
ATOM 3 OP1 U A1745 58.218 1.153 -26.853 1.00 56.23 O
ATOM 4 OP2 U A1745 58.712 -0.957 -28.171 1.00 58.34 O
ATOM 5 O5' U A1745 56.477 -0.640 -27.030 1.00 40.08 O
ATOM 6 C5' U A1745 56.674 -1.724 -26.124 1.00 36.67 C
ATOM 7 C4' U A1745 55.476 -1.986 -25.265 1.00 35.76 C
ATOM 8 O4' U A1745 55.200 -0.822 -24.447 1.00 39.92 O
ATOM 9 C3' U A1745 54.195 -2.292 -26.015 1.00 42.10 C
ATOM 10 O3' U A1745 53.450 -3.235 -25.262 1.00 41.75 O
ATOM 11 C2' U A1745 53.483 -0.944 -26.004 1.00 44.62 C
ATOM 12 O2' U A1745 52.083 -1.001 -26.171 1.00 45.57 O
ATOM 13 C1' U A1745 53.864 -0.428 -24.631 1.00 41.23 C
ATOM 14 N1 U A1745 53.794 1.022 -24.510 1.00 45.64 N
ATOM 15 C2 U A1745 52.847 1.476 -23.622 1.00 40.66 C
ATOM 16 O2 U A1745 52.150 0.723 -22.982 1.00 41.62 O
ATOM 17 N3 U A1745 52.764 2.826 -23.510 1.00 36.78 N
ATOM 18 C4 U A1745 53.538 3.719 -24.205 1.00 40.33 C
ATOM 19 O4 U A1745 53.361 4.909 -23.994 1.00 51.36 O
ATOM 20 C5 U A1745 54.490 3.165 -25.126 1.00 41.75 C
ATOM 21 C6 U A1745 54.597 1.843 -25.266 1.00 40.39 C
ATOM 22 P A A1746 53.910 -4.775 -25.241 1.00 52.17 P
ATOM 23 OP1 A A1746 52.802 -5.544 -24.569 1.00 33.06 O
ATOM 24 OP2 A A1746 55.261 -4.822 -24.661 1.00 45.63 O
ATOM 25 O5' A A1746 53.985 -5.146 -26.787 1.00 28.78 O
TER

ATOM 1 O3' U B1745 53.450 -3.235 -25.262 1.00 41.75 O
ATOM 2 P A B1746 53.910 -4.775 -25.241 1.00 52.17 P
ATOM 3 OP1 A B1746 52.802 -5.544 -24.569 1.00 33.06 O
ATOM 4 OP2 A B1746 55.261 -4.822 -24.661 1.00 45.63 O
ATOM 5 O5' A B1746 53.985 -5.146 -26.787 1.00 28.78 O
ATOM 6 C5' A B1746 52.796 -5.392 -27.507 1.00 34.12 C
ATOM 7 C4' A B1746 53.078 -6.013 -28.826 1.00 31.47 C
ATOM 8 O4' A B1746 53.858 -5.104 -29.614 1.00 37.48 O
ATOM 9 C3' A B1746 53.891 -7.281 -28.796 1.00 27.85 C
ATOM 10 O3' A B1746 53.091 -8.421 -28.557 1.00 35.93 O
ATOM 11 C2' A B1746 54.537 -7.278 -30.172 1.00 32.66 C
ATOM 12 O2' A B1746 53.602 -7.675 -31.161 1.00 34.45 O
ATOM 13 C1' A B1746 54.813 -5.802 -30.362 1.00 33.08 C
ATOM 14 N9 A B1746 56.145 -5.404 -29.871 1.00 36.21 N
ATOM 15 C8 A B1746 56.400 -4.830 -28.642 1.00 38.04 C
ATOM 16 N7 A B1746 57.666 -4.549 -28.455 1.00 36.37 N
ATOM 17 C5 A B1746 58.277 -4.942 -29.639 1.00 33.46 C
ATOM 18 C6 A B1746 59.615 -4.880 -30.064 1.00 33.72 C
ATOM 19 N6 A B1746 60.599 -4.384 -29.316 1.00 36.19 N
ATOM 20 N1 A B1746 59.908 -5.339 -31.285 1.00 28.69 N
ATOM 21 C2 A B1746 58.895 -5.813 -32.010 1.00 37.11 C
ATOM 22 N3 A B1746 57.594 -5.924 -31.741 1.00 33.43 N
ATOM 23 C4 A B1746 57.349 -5.451 -30.525 1.00 30.00 C
ATOM 24 P G B1747 53.618 -9.623 -27.633 1.00 42.78 P
ATOM 25 OP1 G B1747 52.426 -10.294 -27.059 1.00 47.71 O
ATOM 26 OP2 G B1747 54.620 -9.036 -26.698 1.00 42.05 O
ATOM 27 O5' G B1747 54.329 -10.586 -28.699 1.00 24.03 O
TER

Atoms:
C4: (53.538,3.719,-24.205)
N3: (52.764,2.826,-23.510)
OP1: (58.218,1.153,-26.853)
OP2: (58.712,-0.957,-28.171)
C2: (52.847,1.476,-23.622)
C1': (53.864,-0.428,-24.631)
C3': (54.195,-2.292,-26.015)
O5': (56.477,-0.640,-27.030)
O4': (55.200,-0.822,-24.447)
C5': (56.674,-1.724,-26.124)
P: (57.741,0.056,-27.722)
C4': (55.476,-1.986,-25.265)
C2': (53.483,-0.944,-26.004)
O2': (52.083,-1.001,-26.171)
N1: (53.794,1.022,-24.510)
O4: (53.361,4.909,-23.994)
O2: (52.150,0.723,-22.982)
C6: (54.597,1.843,-25.266)
C5: (54.490,3.165,-25.126)
O3': (53.450,-3.235,-25.262)
OP1: (52.802,-5.544,-24.569)
OP2: (55.261,-4.822,-24.661)
C3': (53.891,-7.281,-28.796)
C1': (54.813,-5.802,-30.362)
C5': (52.796,-5.392,-27.507)
O4': (53.858,-5.104,-29.614)
C8: (56.400,-4.830,-28.642)
O2': (53.602,-7.675,-31.161)
C6: (59.615,-4.880,-30.064)
C5: (58.277,-4.942,-29.639)
C4: (57.349,-5.451,-30.525)
P: (53.910,-4.775,-25.241)
C4': (53.078,-6.013,-28.826)
C2': (54.537,-7.278,-30.172)
C2: (58.895,-5.813,-32.010)
N1: (59.908,-5.339,-31.285)
N3: (57.594,-5.924,-31.741)
N6: (60.599,-4.384,-29.316)
N7: (57.666,-4.549,-28.455)
N9: (56.145,-5.404,-29.871)
O5': (53.985,-5.146,-26.787)
O3': (53.091,-8.421,-28.557)
Image (generated by PyMOL):
PyMOL image
show in jmol