ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A1813:A1814

Extra

PDB:
ATOM 1 O3' A A1812 -55.279 -0.283 28.573 1.00 0.01 O
ATOM 2 P U A1813 -54.583 0.544 27.381 1.00 0.01 P
ATOM 3 OP1 U A1813 -54.135 1.821 27.936 1.00 0.01 O
ATOM 4 OP2 U A1813 -55.514 0.550 26.266 1.00 0.01 O
ATOM 5 O5' U A1813 -53.337 -0.339 27.000 1.00 0.01 O
ATOM 6 C5' U A1813 -53.493 -1.503 26.193 1.00 0.01 C
ATOM 7 C4' U A1813 -52.291 -1.726 25.324 1.00 0.01 C
ATOM 8 O4' U A1813 -52.053 -0.522 24.538 1.00 0.01 O
ATOM 9 C3' U A1813 -50.993 -1.983 26.072 1.00 0.01 C
ATOM 10 O3' U A1813 -50.157 -2.806 25.271 1.00 0.01 O
ATOM 11 C2' U A1813 -50.396 -0.583 26.149 1.00 0.01 C
ATOM 12 O2' U A1813 -49.011 -0.533 26.381 1.00 0.01 O
ATOM 13 C1' U A1813 -50.751 -0.068 24.773 1.00 0.01 C
ATOM 14 N1 U A1813 -50.738 1.382 24.651 1.00 0.01 N
ATOM 15 C2 U A1813 -49.829 1.815 23.721 1.00 0.01 C
ATOM 16 O2 U A1813 -49.152 1.007 23.095 1.00 0.01 O
ATOM 17 N3 U A1813 -49.749 3.178 23.551 1.00 0.01 N
ATOM 18 C4 U A1813 -50.481 4.122 24.212 1.00 0.01 C
ATOM 19 O4 U A1813 -50.285 5.297 23.918 1.00 0.01 O
ATOM 20 C5 U A1813 -51.402 3.588 25.169 1.00 0.01 C
ATOM 21 C6 U A1813 -51.507 2.259 25.358 1.00 0.01 C
ATOM 22 P A A1814 -50.415 -4.377 25.187 1.00 0.01 P
ATOM 23 OP1 A A1814 -49.161 -5.005 24.760 1.00 0.01 O
ATOM 24 OP2 A A1814 -51.613 -4.560 24.374 1.00 0.01 O
ATOM 25 O5' A A1814 -50.699 -4.753 26.684 1.00 0.01 O
TER

ATOM 1 O3' U B1813 -50.157 -2.806 25.271 1.00 0.01 O
ATOM 2 P A B1814 -50.415 -4.377 25.187 1.00 0.01 P
ATOM 3 OP1 A B1814 -49.161 -5.005 24.760 1.00 0.01 O
ATOM 4 OP2 A B1814 -51.613 -4.560 24.374 1.00 0.01 O
ATOM 5 O5' A B1814 -50.699 -4.753 26.684 1.00 0.01 O
ATOM 6 C5' A B1814 -49.636 -4.755 27.597 1.00 0.01 C
ATOM 7 C4' A B1814 -49.939 -5.596 28.786 1.00 0.01 C
ATOM 8 O4' A B1814 -50.821 -4.881 29.673 1.00 0.01 O
ATOM 9 C3' A B1814 -50.654 -6.889 28.512 1.00 0.01 C
ATOM 10 O3' A B1814 -49.765 -7.908 28.137 1.00 0.01 O
ATOM 11 C2' A B1814 -51.320 -7.152 29.833 1.00 0.01 C
ATOM 12 O2' A B1814 -50.355 -7.598 30.775 1.00 0.01 O
ATOM 13 C1' A B1814 -51.755 -5.750 30.222 1.00 0.01 C
ATOM 14 N9 A B1814 -53.057 -5.383 29.668 1.00 0.01 N
ATOM 15 C8 A B1814 -53.214 -4.721 28.489 1.00 0.01 C
ATOM 16 N7 A B1814 -54.452 -4.447 28.189 1.00 0.01 N
ATOM 17 C5 A B1814 -55.145 -4.935 29.255 1.00 0.01 C
ATOM 18 C6 A B1814 -56.496 -4.950 29.521 1.00 0.01 C
ATOM 19 N6 A B1814 -57.387 -4.460 28.711 1.00 0.01 N
ATOM 20 N1 A B1814 -56.919 -5.494 30.648 1.00 0.01 N
ATOM 21 C2 A B1814 -55.997 -6.006 31.461 1.00 0.01 C
ATOM 22 N3 A B1814 -54.671 -6.069 31.321 1.00 0.01 N
ATOM 23 C4 A B1814 -54.303 -5.499 30.180 1.00 0.01 C
ATOM 24 P C B1815 -50.290 -9.194 27.369 1.00 0.01 P
ATOM 25 OP1 C B1815 -49.150 -10.105 27.269 1.00 0.01 O
ATOM 26 OP2 C B1815 -50.955 -8.730 26.136 1.00 0.01 O
ATOM 27 O5' C B1815 -51.350 -9.784 28.372 1.00 0.01 O
TER

Atoms:
C4: (-50.481,4.122,24.212)
N3: (-49.749,3.178,23.551)
OP1: (-54.135,1.821,27.936)
OP2: (-55.514,0.550,26.266)
C2: (-49.829,1.815,23.721)
C1': (-50.751,-0.068,24.773)
C3': (-50.993,-1.983,26.072)
O5': (-53.337,-0.339,27.000)
O4': (-52.053,-0.522,24.538)
C5': (-53.493,-1.503,26.193)
P: (-54.583,0.544,27.381)
C4': (-52.291,-1.726,25.324)
C2': (-50.396,-0.583,26.149)
O2': (-49.011,-0.533,26.381)
N1: (-50.738,1.382,24.651)
O4: (-50.285,5.297,23.918)
O2: (-49.152,1.007,23.095)
C6: (-51.507,2.259,25.358)
C5: (-51.402,3.588,25.169)
O3': (-50.157,-2.806,25.271)
OP1: (-49.161,-5.005,24.760)
OP2: (-51.613,-4.560,24.374)
C3': (-50.654,-6.889,28.512)
C1': (-51.755,-5.750,30.222)
C5': (-49.636,-4.755,27.597)
O4': (-50.821,-4.881,29.673)
C8: (-53.214,-4.721,28.489)
O2': (-50.355,-7.598,30.775)
C6: (-56.496,-4.950,29.521)
C5: (-55.145,-4.935,29.255)
C4: (-54.303,-5.499,30.180)
P: (-50.415,-4.377,25.187)
C4': (-49.939,-5.596,28.786)
C2': (-51.320,-7.152,29.833)
C2: (-55.997,-6.006,31.461)
N1: (-56.919,-5.494,30.648)
N3: (-54.671,-6.069,31.321)
N6: (-57.387,-4.460,28.711)
N7: (-54.452,-4.447,28.189)
N9: (-53.057,-5.383,29.668)
O5': (-50.699,-4.753,26.684)
O3': (-49.765,-7.908,28.137)
Image (generated by PyMOL):
PyMOL image
show in jmol