ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B4A:B44:B45

Extra

PDB:
ATOM 1 O3' G A 43 42.548 23.317 53.622 1.00 48.09 O
ATOM 2 P U A 44 41.683 23.129 52.276 1.00 48.02 P
ATOM 3 OP1 U A 44 41.204 21.725 52.252 1.00 47.53 O
ATOM 4 OP2 U A 44 42.461 23.667 51.129 1.00 47.44 O
ATOM 5 O5' U A 44 40.425 24.083 52.481 1.00 48.04 O
ATOM 6 C5' U A 44 39.310 24.047 51.590 1.00 49.38 C
ATOM 7 C4' U A 44 38.302 25.095 52.001 1.00 49.57 C
ATOM 8 O4' U A 44 37.978 24.872 53.385 1.00 48.47 O
ATOM 9 C3' U A 44 38.872 26.503 51.923 1.00 50.18 C
ATOM 10 O3' U A 44 38.410 27.175 50.744 1.00 52.50 O
ATOM 11 C2' U A 44 38.307 27.238 53.142 1.00 49.11 C
ATOM 12 O2' U A 44 37.269 28.138 52.839 1.00 50.28 O
ATOM 13 C1' U A 44 37.774 26.106 54.018 1.00 46.81 C
ATOM 14 N1 U A 44 38.309 26.029 55.376 1.00 42.36 N
ATOM 15 C2 U A 44 37.424 26.306 56.381 1.00 39.75 C
ATOM 16 O2 U A 44 36.273 26.640 56.159 1.00 38.18 O
ATOM 17 N3 U A 44 37.926 26.182 57.645 1.00 38.38 N
ATOM 18 C4 U A 44 39.208 25.824 57.986 1.00 39.55 C
ATOM 19 O4 U A 44 39.509 25.736 59.170 1.00 42.69 O
ATOM 20 C5 U A 44 40.076 25.568 56.880 1.00 39.39 C
ATOM 21 C6 U A 44 39.606 25.680 55.638 1.00 40.41 C
ATOM 22 P G A 45 37.163 26.579 49.895 1.00 54.00 P
ATOM 23 OP1 G A 45 35.944 26.579 50.735 1.00 52.24 O
ATOM 24 OP2 G A 45 37.603 25.310 49.243 1.00 55.79 O
ATOM 25 O5' G A 45 36.969 27.655 48.735 1.00 53.54 O
TER

ATOM 1 O3' U B 44 38.410 27.175 50.744 1.00 52.50 O
ATOM 2 P G B 45 37.163 26.579 49.895 1.00 54.00 P
ATOM 3 OP1 G B 45 35.944 26.579 50.735 1.00 52.24 O
ATOM 4 OP2 G B 45 37.603 25.310 49.243 1.00 55.79 O
ATOM 5 O5' G B 45 36.969 27.655 48.735 1.00 53.54 O
ATOM 6 C5' G B 45 36.882 29.042 49.035 1.00 53.66 C
ATOM 7 C4' G B 45 37.867 29.826 48.197 1.00 54.13 C
ATOM 8 O4' G B 45 39.218 29.544 48.628 1.00 53.74 O
ATOM 9 C3' G B 45 37.899 29.496 46.718 1.00 55.00 C
ATOM 10 O3' G B 45 36.871 30.171 46.020 1.00 57.58 O
ATOM 11 C2' G B 45 39.261 30.025 46.305 1.00 53.86 C
ATOM 12 O2' G B 45 39.253 31.422 46.123 1.00 53.08 O
ATOM 13 C1' G B 45 40.101 29.664 47.527 1.00 53.36 C
ATOM 14 N9 G B 45 40.811 28.401 47.393 1.00 53.15 N
ATOM 15 C8 G B 45 40.607 27.266 48.138 1.00 53.91 C
ATOM 16 N7 G B 45 41.429 26.300 47.837 1.00 53.48 N
ATOM 17 C5 G B 45 42.213 26.824 46.820 1.00 53.05 C
ATOM 18 C6 G B 45 43.275 26.239 46.097 1.00 53.85 C
ATOM 19 O6 G B 45 43.760 25.105 46.223 1.00 54.80 O
ATOM 20 N1 G B 45 43.789 27.115 45.147 1.00 53.21 N
ATOM 21 C2 G B 45 43.339 28.392 44.930 1.00 53.63 C
ATOM 22 N2 G B 45 43.973 29.082 43.975 1.00 55.99 N
ATOM 23 N3 G B 45 42.346 28.952 45.600 1.00 52.34 N
ATOM 24 C4 G B 45 41.835 28.117 46.525 1.00 52.71 C
ATOM 25 P C B 46 36.054 29.395 44.883 1.00 59.06 P
ATOM 26 OP1 C B 46 35.027 30.333 44.353 1.00 58.89 O
ATOM 27 OP2 C B 46 35.635 28.082 45.448 1.00 57.46 O
ATOM 28 O5' C B 46 37.154 29.143 43.755 1.00 60.03 O
TER

Atoms:
C4: (39.208,25.824,57.986)
N3: (37.926,26.182,57.645)
OP1: (41.204,21.725,52.252)
OP2: (42.461,23.667,51.129)
C2: (37.424,26.306,56.381)
C1': (37.774,26.106,54.018)
C3': (38.872,26.503,51.923)
O5': (40.425,24.083,52.481)
O4': (37.978,24.872,53.385)
C5': (39.310,24.047,51.590)
P: (41.683,23.129,52.276)
C4': (38.302,25.095,52.001)
C2': (38.307,27.238,53.142)
O2': (37.269,28.138,52.839)
N1: (38.309,26.029,55.376)
O4: (39.509,25.736,59.170)
O2: (36.273,26.640,56.159)
C6: (39.606,25.680,55.638)
C5: (40.076,25.568,56.880)
O3': (38.410,27.175,50.744)
OP1: (35.944,26.579,50.735)
OP2: (37.603,25.310,49.243)
C3': (37.899,29.496,46.718)
C1': (40.101,29.664,47.527)
C5': (36.882,29.042,49.035)
O6: (43.760,25.105,46.223)
O4': (39.218,29.544,48.628)
C8: (40.607,27.266,48.138)
C2: (43.339,28.392,44.930)
C6: (43.275,26.239,46.097)
C5: (42.213,26.824,46.820)
C4: (41.835,28.117,46.525)
P: (37.163,26.579,49.895)
C4': (37.867,29.826,48.197)
C2': (39.261,30.025,46.305)
O2': (39.253,31.422,46.123)
N1: (43.789,27.115,45.147)
N2: (43.973,29.082,43.975)
N3: (42.346,28.952,45.600)
N7: (41.429,26.300,47.837)
N9: (40.811,28.401,47.393)
O5': (36.969,27.655,48.735)
O3': (36.871,30.171,46.020)
Image (generated by PyMOL):
PyMOL image
show in jmol