Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01814:01816
Extra
PDB:
ATOM 1 O3' G A1813 122.776 124.074 56.110 1.00 44.46 O
ATOM 2 P C A1814 121.783 123.821 54.875 1.00 47.72 P
ATOM 3 OP1 C A1814 121.174 122.473 55.036 1.00 47.35 O
ATOM 4 OP2 C A1814 122.488 124.156 53.617 1.00 48.36 O
ATOM 5 O5' C A1814 120.663 124.925 55.103 1.00 47.19 O
ATOM 6 C5' C A1814 119.422 124.849 54.409 1.00 46.83 C
ATOM 7 C4' C A1814 118.756 126.201 54.372 1.00 46.85 C
ATOM 8 O4' C A1814 118.348 126.598 55.706 1.00 44.62 O
ATOM 9 C3' C A1814 119.589 127.351 53.818 1.00 45.73 C
ATOM 10 O3' C A1814 118.895 127.955 52.745 1.00 47.97 O
ATOM 11 C2' C A1814 119.728 128.305 55.002 1.00 44.55 C
ATOM 12 O2' C A1814 119.712 129.660 54.601 1.00 45.81 O
ATOM 13 C1' C A1814 118.481 127.991 55.823 1.00 42.27 C
ATOM 14 N1 C A1814 118.641 128.327 57.251 1.00 39.39 N
ATOM 15 C2 C A1814 117.799 129.292 57.825 1.00 38.10 C
ATOM 16 O2 C A1814 116.921 129.822 57.128 1.00 38.03 O
ATOM 17 N3 C A1814 117.970 129.627 59.124 1.00 38.07 N
ATOM 18 C4 C A1814 118.938 129.048 59.842 1.00 39.13 C
ATOM 19 N4 C A1814 119.093 129.432 61.105 1.00 38.71 N
ATOM 20 C5 C A1814 119.794 128.054 59.290 1.00 38.50 C
ATOM 21 C6 C A1814 119.610 127.723 58.006 1.00 39.43 C
ATOM 22 P A A1815 119.319 127.589 51.240 1.00 51.00 P
ATOM 23 OP1 A A1815 120.609 126.848 51.270 1.00 47.09 O
ATOM 24 OP2 A A1815 119.204 128.846 50.447 1.00 50.79 O
ATOM 25 O5' A A1815 118.219 126.542 50.753 1.00 51.61 O
TER
ATOM 1 O3' A B1815 115.091 123.766 51.855 1.00 52.15 O
ATOM 2 P A B1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 3 OP1 A B1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 4 OP2 A B1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 5 O5' A B1816 115.143 123.816 54.386 1.00 48.28 O
ATOM 6 C5' A B1816 115.860 122.577 54.522 1.00 39.94 C
ATOM 7 C4' A B1816 116.409 122.447 55.926 1.00 37.21 C
ATOM 8 O4' A B1816 117.118 123.674 56.264 1.00 35.63 O
ATOM 9 C3' A B1816 115.376 122.321 57.035 1.00 37.85 C
ATOM 10 O3' A B1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 11 C2' A B1816 116.149 122.814 58.253 1.00 36.96 C
ATOM 12 O2' A B1816 117.058 121.866 58.775 1.00 36.90 O
ATOM 13 C1' A B1816 116.950 123.965 57.647 1.00 34.98 C
ATOM 14 N9 A B1816 116.261 125.250 57.780 1.00 32.27 N
ATOM 15 C8 A B1816 115.598 125.968 56.812 1.00 33.06 C
ATOM 16 N7 A B1816 115.062 127.082 57.254 1.00 32.66 N
ATOM 17 C5 A B1816 115.397 127.100 58.601 1.00 31.58 C
ATOM 18 C6 A B1816 115.117 128.013 59.631 1.00 33.82 C
ATOM 19 N6 A B1816 114.414 129.136 59.453 1.00 35.78 N
ATOM 20 N1 A B1816 115.589 127.732 60.867 1.00 35.46 N
ATOM 21 C2 A B1816 116.301 126.608 61.039 1.00 34.36 C
ATOM 22 N3 A B1816 116.632 125.675 60.148 1.00 31.20 N
ATOM 23 C4 A B1816 116.141 125.982 58.936 1.00 31.12 C
ATOM 24 P A B1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 25 OP1 A B1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 26 OP2 A B1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 27 O5' A B1817 113.448 121.181 59.240 1.00 37.20 O
TER
ATOM 2 P C A1814 121.783 123.821 54.875 1.00 47.72 P
ATOM 3 OP1 C A1814 121.174 122.473 55.036 1.00 47.35 O
ATOM 4 OP2 C A1814 122.488 124.156 53.617 1.00 48.36 O
ATOM 5 O5' C A1814 120.663 124.925 55.103 1.00 47.19 O
ATOM 6 C5' C A1814 119.422 124.849 54.409 1.00 46.83 C
ATOM 7 C4' C A1814 118.756 126.201 54.372 1.00 46.85 C
ATOM 8 O4' C A1814 118.348 126.598 55.706 1.00 44.62 O
ATOM 9 C3' C A1814 119.589 127.351 53.818 1.00 45.73 C
ATOM 10 O3' C A1814 118.895 127.955 52.745 1.00 47.97 O
ATOM 11 C2' C A1814 119.728 128.305 55.002 1.00 44.55 C
ATOM 12 O2' C A1814 119.712 129.660 54.601 1.00 45.81 O
ATOM 13 C1' C A1814 118.481 127.991 55.823 1.00 42.27 C
ATOM 14 N1 C A1814 118.641 128.327 57.251 1.00 39.39 N
ATOM 15 C2 C A1814 117.799 129.292 57.825 1.00 38.10 C
ATOM 16 O2 C A1814 116.921 129.822 57.128 1.00 38.03 O
ATOM 17 N3 C A1814 117.970 129.627 59.124 1.00 38.07 N
ATOM 18 C4 C A1814 118.938 129.048 59.842 1.00 39.13 C
ATOM 19 N4 C A1814 119.093 129.432 61.105 1.00 38.71 N
ATOM 20 C5 C A1814 119.794 128.054 59.290 1.00 38.50 C
ATOM 21 C6 C A1814 119.610 127.723 58.006 1.00 39.43 C
ATOM 22 P A A1815 119.319 127.589 51.240 1.00 51.00 P
ATOM 23 OP1 A A1815 120.609 126.848 51.270 1.00 47.09 O
ATOM 24 OP2 A A1815 119.204 128.846 50.447 1.00 50.79 O
ATOM 25 O5' A A1815 118.219 126.542 50.753 1.00 51.61 O
TER
ATOM 1 O3' A B1815 115.091 123.766 51.855 1.00 52.15 O
ATOM 2 P A B1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 3 OP1 A B1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 4 OP2 A B1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 5 O5' A B1816 115.143 123.816 54.386 1.00 48.28 O
ATOM 6 C5' A B1816 115.860 122.577 54.522 1.00 39.94 C
ATOM 7 C4' A B1816 116.409 122.447 55.926 1.00 37.21 C
ATOM 8 O4' A B1816 117.118 123.674 56.264 1.00 35.63 O
ATOM 9 C3' A B1816 115.376 122.321 57.035 1.00 37.85 C
ATOM 10 O3' A B1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 11 C2' A B1816 116.149 122.814 58.253 1.00 36.96 C
ATOM 12 O2' A B1816 117.058 121.866 58.775 1.00 36.90 O
ATOM 13 C1' A B1816 116.950 123.965 57.647 1.00 34.98 C
ATOM 14 N9 A B1816 116.261 125.250 57.780 1.00 32.27 N
ATOM 15 C8 A B1816 115.598 125.968 56.812 1.00 33.06 C
ATOM 16 N7 A B1816 115.062 127.082 57.254 1.00 32.66 N
ATOM 17 C5 A B1816 115.397 127.100 58.601 1.00 31.58 C
ATOM 18 C6 A B1816 115.117 128.013 59.631 1.00 33.82 C
ATOM 19 N6 A B1816 114.414 129.136 59.453 1.00 35.78 N
ATOM 20 N1 A B1816 115.589 127.732 60.867 1.00 35.46 N
ATOM 21 C2 A B1816 116.301 126.608 61.039 1.00 34.36 C
ATOM 22 N3 A B1816 116.632 125.675 60.148 1.00 31.20 N
ATOM 23 C4 A B1816 116.141 125.982 58.936 1.00 31.12 C
ATOM 24 P A B1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 25 OP1 A B1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 26 OP2 A B1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 27 O5' A B1817 113.448 121.181 59.240 1.00 37.20 O
TER
Atoms:
C2: (117.799,129.292,57.825)
OP1: (121.174,122.473,55.036)
OP2: (122.488,124.156,53.617)
C4: (118.938,129.048,59.842)
O5': (120.663,124.925,55.103)
C3': (119.589,127.351,53.818)
C1': (118.481,127.991,55.823)
O4': (118.348,126.598,55.706)
C5': (119.422,124.849,54.409)
P: (121.783,123.821,54.875)
O2: (116.921,129.822,57.128)
C4': (118.756,126.201,54.372)
C2': (119.728,128.305,55.002)
O2': (119.712,129.660,54.601)
N1: (118.641,128.327,57.251)
N3: (117.970,129.627,59.124)
N4: (119.093,129.432,61.105)
C6: (119.610,127.723,58.006)
C5: (119.794,128.054,59.290)
O3': (118.895,127.955,52.745)
OP1: (121.174,122.473,55.036)
OP2: (122.488,124.156,53.617)
C4: (118.938,129.048,59.842)
O5': (120.663,124.925,55.103)
C3': (119.589,127.351,53.818)
C1': (118.481,127.991,55.823)
O4': (118.348,126.598,55.706)
C5': (119.422,124.849,54.409)
P: (121.783,123.821,54.875)
O2: (116.921,129.822,57.128)
C4': (118.756,126.201,54.372)
C2': (119.728,128.305,55.002)
O2': (119.712,129.660,54.601)
N1: (118.641,128.327,57.251)
N3: (117.970,129.627,59.124)
N4: (119.093,129.432,61.105)
C6: (119.610,127.723,58.006)
C5: (119.794,128.054,59.290)
O3': (118.895,127.955,52.745)
OP1: (113.080,123.124,53.160)
OP2: (113.886,125.563,53.108)
C3': (115.376,122.321,57.035)
C1': (116.950,123.965,57.647)
C5': (115.860,122.577,54.522)
O4': (117.118,123.674,56.264)
C8: (115.598,125.968,56.812)
O2': (117.058,121.866,58.775)
C6: (115.117,128.013,59.631)
C5: (115.397,127.100,58.601)
C4: (116.141,125.982,58.936)
P: (114.192,124.105,53.137)
C4': (116.409,122.447,55.926)
C2': (116.149,122.814,58.253)
C2: (116.301,126.608,61.039)
N1: (115.589,127.732,60.867)
N3: (116.632,125.675,60.148)
N6: (114.414,129.136,59.453)
N7: (115.062,127.082,57.254)
N9: (116.261,125.250,57.780)
O5': (115.143,123.816,54.386)
O3': (114.908,120.982,57.177)
OP2: (113.886,125.563,53.108)
C3': (115.376,122.321,57.035)
C1': (116.950,123.965,57.647)
C5': (115.860,122.577,54.522)
O4': (117.118,123.674,56.264)
C8: (115.598,125.968,56.812)
O2': (117.058,121.866,58.775)
C6: (115.117,128.013,59.631)
C5: (115.397,127.100,58.601)
C4: (116.141,125.982,58.936)
P: (114.192,124.105,53.137)
C4': (116.409,122.447,55.926)
C2': (116.149,122.814,58.253)
C2: (116.301,126.608,61.039)
N1: (115.589,127.732,60.867)
N3: (116.632,125.675,60.148)
N6: (114.414,129.136,59.453)
N7: (115.062,127.082,57.254)
N9: (116.261,125.250,57.780)
O5': (115.143,123.816,54.386)
O3': (114.908,120.982,57.177)
Image (generated by PyMOL):