Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02064:02062
Extra
PDB:
ATOM 1 O3' U A2063 94.556 101.945 74.752 1.00 47.29 O
ATOM 2 P A A2064 93.376 103.015 74.938 1.00 43.90 P
ATOM 3 OP1 A A2064 93.422 103.931 73.772 1.00 42.90 O
ATOM 4 OP2 A A2064 93.434 103.561 76.315 1.00 41.91 O
ATOM 5 O5' A A2064 92.056 102.147 74.830 1.00 43.34 O
ATOM 6 C5' A A2064 91.862 100.974 75.640 1.00 40.40 C
ATOM 7 C4' A A2064 90.490 100.416 75.384 1.00 37.54 C
ATOM 8 O4' A A2064 89.502 101.376 75.837 1.00 37.76 O
ATOM 9 C3' A A2064 90.202 100.247 73.907 1.00 36.47 C
ATOM 10 O3' A A2064 90.681 99.007 73.425 1.00 34.97 O
ATOM 11 C2' A A2064 88.694 100.381 73.834 1.00 37.39 C
ATOM 12 O2' A A2064 88.047 99.182 74.204 1.00 39.34 O
ATOM 13 C1' A A2064 88.441 101.453 74.899 1.00 38.60 C
ATOM 14 N9 A A2064 88.346 102.837 74.413 1.00 38.05 N
ATOM 15 C8 A A2064 89.180 103.890 74.704 1.00 37.18 C
ATOM 16 N7 A A2064 88.816 105.023 74.159 1.00 36.23 N
ATOM 17 C5 A A2064 87.673 104.696 73.447 1.00 37.24 C
ATOM 18 C6 A A2064 86.810 105.461 72.650 1.00 37.06 C
ATOM 19 N6 A A2064 86.981 106.760 72.415 1.00 37.79 N
ATOM 20 N1 A A2064 85.754 104.839 72.091 1.00 37.50 N
ATOM 21 C2 A A2064 85.590 103.533 72.316 1.00 38.43 C
ATOM 22 N3 A A2064 86.335 102.702 73.039 1.00 38.89 N
ATOM 23 C4 A A2064 87.374 103.354 73.588 1.00 37.99 C
ATOM 24 P C A2065 91.037 98.856 71.875 1.00 36.98 P
ATOM 25 OP1 C A2065 91.601 97.502 71.657 1.00 38.31 O
ATOM 26 OP2 C A2065 91.807 100.047 71.449 1.00 37.55 O
ATOM 27 O5' C A2065 89.620 98.936 71.169 1.00 35.92 O
TER
ATOM 1 O3' U B2061 94.194 112.661 77.217 1.00 36.74 O
ATOM 2 P U B2062 95.188 112.134 76.064 1.00 37.56 P
ATOM 3 OP1 U B2062 96.553 112.615 76.408 1.00 34.43 O
ATOM 4 OP2 U B2062 94.607 112.468 74.739 1.00 36.86 O
ATOM 5 O5' U B2062 95.169 110.552 76.245 1.00 36.95 O
ATOM 6 C5' U B2062 95.743 109.942 77.415 1.00 37.89 C
ATOM 7 C4' U B2062 95.262 108.524 77.555 1.00 38.09 C
ATOM 8 O4' U B2062 93.822 108.534 77.707 1.00 39.76 O
ATOM 9 C3' U B2062 95.500 107.617 76.360 1.00 38.17 C
ATOM 10 O3' U B2062 96.811 107.074 76.367 1.00 38.22 O
ATOM 11 C2' U B2062 94.441 106.545 76.560 1.00 40.36 C
ATOM 12 O2' U B2062 94.820 105.594 77.538 1.00 42.26 O
ATOM 13 C1' U B2062 93.272 107.378 77.094 1.00 40.49 C
ATOM 14 N1 U B2062 92.308 107.795 76.059 1.00 39.81 N
ATOM 15 C2 U B2062 91.236 106.967 75.826 1.00 38.08 C
ATOM 16 O2 U B2062 91.070 105.929 76.428 1.00 38.62 O
ATOM 17 N3 U B2062 90.363 107.400 74.860 1.00 37.52 N
ATOM 18 C4 U B2062 90.449 108.559 74.119 1.00 37.39 C
ATOM 19 O4 U B2062 89.550 108.839 73.327 1.00 35.66 O
ATOM 20 C5 U B2062 91.593 109.364 74.407 1.00 38.04 C
ATOM 21 C6 U B2062 92.462 108.966 75.345 1.00 40.43 C
ATOM 22 P U B2063 97.390 106.380 75.044 1.00 40.13 P
ATOM 23 OP1 U B2063 98.856 106.288 75.184 1.00 41.13 O
ATOM 24 OP2 U B2063 96.814 107.024 73.844 1.00 39.46 O
ATOM 25 O5' U B2063 96.838 104.893 75.113 1.00 44.33 O
TER
ATOM 2 P A A2064 93.376 103.015 74.938 1.00 43.90 P
ATOM 3 OP1 A A2064 93.422 103.931 73.772 1.00 42.90 O
ATOM 4 OP2 A A2064 93.434 103.561 76.315 1.00 41.91 O
ATOM 5 O5' A A2064 92.056 102.147 74.830 1.00 43.34 O
ATOM 6 C5' A A2064 91.862 100.974 75.640 1.00 40.40 C
ATOM 7 C4' A A2064 90.490 100.416 75.384 1.00 37.54 C
ATOM 8 O4' A A2064 89.502 101.376 75.837 1.00 37.76 O
ATOM 9 C3' A A2064 90.202 100.247 73.907 1.00 36.47 C
ATOM 10 O3' A A2064 90.681 99.007 73.425 1.00 34.97 O
ATOM 11 C2' A A2064 88.694 100.381 73.834 1.00 37.39 C
ATOM 12 O2' A A2064 88.047 99.182 74.204 1.00 39.34 O
ATOM 13 C1' A A2064 88.441 101.453 74.899 1.00 38.60 C
ATOM 14 N9 A A2064 88.346 102.837 74.413 1.00 38.05 N
ATOM 15 C8 A A2064 89.180 103.890 74.704 1.00 37.18 C
ATOM 16 N7 A A2064 88.816 105.023 74.159 1.00 36.23 N
ATOM 17 C5 A A2064 87.673 104.696 73.447 1.00 37.24 C
ATOM 18 C6 A A2064 86.810 105.461 72.650 1.00 37.06 C
ATOM 19 N6 A A2064 86.981 106.760 72.415 1.00 37.79 N
ATOM 20 N1 A A2064 85.754 104.839 72.091 1.00 37.50 N
ATOM 21 C2 A A2064 85.590 103.533 72.316 1.00 38.43 C
ATOM 22 N3 A A2064 86.335 102.702 73.039 1.00 38.89 N
ATOM 23 C4 A A2064 87.374 103.354 73.588 1.00 37.99 C
ATOM 24 P C A2065 91.037 98.856 71.875 1.00 36.98 P
ATOM 25 OP1 C A2065 91.601 97.502 71.657 1.00 38.31 O
ATOM 26 OP2 C A2065 91.807 100.047 71.449 1.00 37.55 O
ATOM 27 O5' C A2065 89.620 98.936 71.169 1.00 35.92 O
TER
ATOM 1 O3' U B2061 94.194 112.661 77.217 1.00 36.74 O
ATOM 2 P U B2062 95.188 112.134 76.064 1.00 37.56 P
ATOM 3 OP1 U B2062 96.553 112.615 76.408 1.00 34.43 O
ATOM 4 OP2 U B2062 94.607 112.468 74.739 1.00 36.86 O
ATOM 5 O5' U B2062 95.169 110.552 76.245 1.00 36.95 O
ATOM 6 C5' U B2062 95.743 109.942 77.415 1.00 37.89 C
ATOM 7 C4' U B2062 95.262 108.524 77.555 1.00 38.09 C
ATOM 8 O4' U B2062 93.822 108.534 77.707 1.00 39.76 O
ATOM 9 C3' U B2062 95.500 107.617 76.360 1.00 38.17 C
ATOM 10 O3' U B2062 96.811 107.074 76.367 1.00 38.22 O
ATOM 11 C2' U B2062 94.441 106.545 76.560 1.00 40.36 C
ATOM 12 O2' U B2062 94.820 105.594 77.538 1.00 42.26 O
ATOM 13 C1' U B2062 93.272 107.378 77.094 1.00 40.49 C
ATOM 14 N1 U B2062 92.308 107.795 76.059 1.00 39.81 N
ATOM 15 C2 U B2062 91.236 106.967 75.826 1.00 38.08 C
ATOM 16 O2 U B2062 91.070 105.929 76.428 1.00 38.62 O
ATOM 17 N3 U B2062 90.363 107.400 74.860 1.00 37.52 N
ATOM 18 C4 U B2062 90.449 108.559 74.119 1.00 37.39 C
ATOM 19 O4 U B2062 89.550 108.839 73.327 1.00 35.66 O
ATOM 20 C5 U B2062 91.593 109.364 74.407 1.00 38.04 C
ATOM 21 C6 U B2062 92.462 108.966 75.345 1.00 40.43 C
ATOM 22 P U B2063 97.390 106.380 75.044 1.00 40.13 P
ATOM 23 OP1 U B2063 98.856 106.288 75.184 1.00 41.13 O
ATOM 24 OP2 U B2063 96.814 107.024 73.844 1.00 39.46 O
ATOM 25 O5' U B2063 96.838 104.893 75.113 1.00 44.33 O
TER
Atoms:
OP1: (93.422,103.931,73.772)
OP2: (93.434,103.561,76.315)
C3': (90.202,100.247,73.907)
C1': (88.441,101.453,74.899)
C5': (91.862,100.974,75.640)
O4': (89.502,101.376,75.837)
C8: (89.180,103.890,74.704)
O2': (88.047,99.182,74.204)
C6: (86.810,105.461,72.650)
C5: (87.673,104.696,73.447)
C4: (87.374,103.354,73.588)
P: (93.376,103.015,74.938)
C4': (90.490,100.416,75.384)
C2': (88.694,100.381,73.834)
C2: (85.590,103.533,72.316)
N1: (85.754,104.839,72.091)
N3: (86.335,102.702,73.039)
N6: (86.981,106.760,72.415)
N7: (88.816,105.023,74.159)
N9: (88.346,102.837,74.413)
O5': (92.056,102.147,74.830)
O3': (90.681,99.007,73.425)
OP2: (93.434,103.561,76.315)
C3': (90.202,100.247,73.907)
C1': (88.441,101.453,74.899)
C5': (91.862,100.974,75.640)
O4': (89.502,101.376,75.837)
C8: (89.180,103.890,74.704)
O2': (88.047,99.182,74.204)
C6: (86.810,105.461,72.650)
C5: (87.673,104.696,73.447)
C4: (87.374,103.354,73.588)
P: (93.376,103.015,74.938)
C4': (90.490,100.416,75.384)
C2': (88.694,100.381,73.834)
C2: (85.590,103.533,72.316)
N1: (85.754,104.839,72.091)
N3: (86.335,102.702,73.039)
N6: (86.981,106.760,72.415)
N7: (88.816,105.023,74.159)
N9: (88.346,102.837,74.413)
O5': (92.056,102.147,74.830)
O3': (90.681,99.007,73.425)
C4: (90.449,108.559,74.119)
N3: (90.363,107.400,74.860)
OP1: (96.553,112.615,76.408)
OP2: (94.607,112.468,74.739)
C2: (91.236,106.967,75.826)
C1': (93.272,107.378,77.094)
C3': (95.500,107.617,76.360)
O5': (95.169,110.552,76.245)
O4': (93.822,108.534,77.707)
C5': (95.743,109.942,77.415)
P: (95.188,112.134,76.064)
C4': (95.262,108.524,77.555)
C2': (94.441,106.545,76.560)
O2': (94.820,105.594,77.538)
N1: (92.308,107.795,76.059)
O4: (89.550,108.839,73.327)
O2: (91.070,105.929,76.428)
C6: (92.462,108.966,75.345)
C5: (91.593,109.364,74.407)
O3': (96.811,107.074,76.367)
N3: (90.363,107.400,74.860)
OP1: (96.553,112.615,76.408)
OP2: (94.607,112.468,74.739)
C2: (91.236,106.967,75.826)
C1': (93.272,107.378,77.094)
C3': (95.500,107.617,76.360)
O5': (95.169,110.552,76.245)
O4': (93.822,108.534,77.707)
C5': (95.743,109.942,77.415)
P: (95.188,112.134,76.064)
C4': (95.262,108.524,77.555)
C2': (94.441,106.545,76.560)
O2': (94.820,105.594,77.538)
N1: (92.308,107.795,76.059)
O4: (89.550,108.839,73.327)
O2: (91.070,105.929,76.428)
C6: (92.462,108.966,75.345)
C5: (91.593,109.364,74.407)
O3': (96.811,107.074,76.367)
Image (generated by PyMOL):