Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0551:0582
Extra
PDB:
ATOM 1 O3' A A 550 -15.941 98.299 95.958 1.00 54.24 O
ATOM 2 P C A 551 -15.038 97.183 96.660 1.00 54.91 P
ATOM 3 OP1 C A 551 -15.677 95.857 96.429 1.00 56.69 O
ATOM 4 OP2 C A 551 -14.756 97.641 98.045 1.00 54.31 O
ATOM 5 O5' C A 551 -13.686 97.212 95.821 1.00 55.89 O
ATOM 6 C5' C A 551 -13.672 96.802 94.439 1.00 53.66 C
ATOM 7 C4' C A 551 -12.295 96.988 93.848 1.00 52.20 C
ATOM 8 O4' C A 551 -11.933 98.392 93.878 1.00 51.90 O
ATOM 9 C3' C A 551 -11.158 96.301 94.583 1.00 51.54 C
ATOM 10 O3' C A 551 -11.063 94.940 94.200 1.00 52.13 O
ATOM 11 C2' C A 551 -9.951 97.101 94.114 1.00 52.02 C
ATOM 12 O2' C A 551 -9.524 96.728 92.816 1.00 50.91 O
ATOM 13 C1' C A 551 -10.533 98.516 94.058 1.00 51.44 C
ATOM 14 N1 C A 551 -10.283 99.318 95.270 1.00 53.85 N
ATOM 15 C2 C A 551 -9.174 100.171 95.292 1.00 54.51 C
ATOM 16 O2 C A 551 -8.420 100.203 94.305 1.00 55.34 O
ATOM 17 N3 C A 551 -8.947 100.933 96.388 1.00 54.50 N
ATOM 18 C4 C A 551 -9.769 100.855 97.437 1.00 54.44 C
ATOM 19 N4 C A 551 -9.507 101.626 98.494 1.00 52.93 N
ATOM 20 C5 C A 551 -10.896 99.986 97.448 1.00 53.55 C
ATOM 21 C6 C A 551 -11.115 99.243 96.355 1.00 53.50 C
ATOM 22 P G A 552 -10.772 93.823 95.310 1.00 56.31 P
ATOM 23 OP1 G A 552 -10.528 92.535 94.609 1.00 54.01 O
ATOM 24 OP2 G A 552 -11.843 93.915 96.337 1.00 56.53 O
ATOM 25 O5' G A 552 -9.414 94.297 95.992 1.00 57.31 O
TER
ATOM 1 O3' A B 581 0.300 105.975 97.690 1.00 49.61 O
ATOM 2 P C B 582 -0.740 106.898 96.888 1.00 47.91 P
ATOM 3 OP1 C B 582 -0.111 108.223 96.684 1.00 48.93 O
ATOM 4 OP2 C B 582 -2.054 106.823 97.558 1.00 51.33 O
ATOM 5 O5' C B 582 -0.878 106.175 95.478 1.00 47.44 O
ATOM 6 C5' C B 582 0.233 106.090 94.586 1.00 44.35 C
ATOM 7 C4' C B 582 -0.122 105.245 93.388 1.00 46.82 C
ATOM 8 O4' C B 582 -0.470 103.902 93.818 1.00 45.84 O
ATOM 9 C3' C B 582 -1.329 105.678 92.574 1.00 45.91 C
ATOM 10 O3' C B 582 -1.016 106.735 91.683 1.00 47.01 O
ATOM 11 C2' C B 582 -1.655 104.396 91.828 1.00 47.10 C
ATOM 12 O2' C B 582 -0.748 104.150 90.772 1.00 43.89 O
ATOM 13 C1' C B 582 -1.438 103.355 92.929 1.00 47.74 C
ATOM 14 N1 C B 582 -2.685 103.086 93.686 1.00 51.24 N
ATOM 15 C2 C B 582 -3.583 102.106 93.210 1.00 50.66 C
ATOM 16 O2 C B 582 -3.308 101.476 92.180 1.00 49.38 O
ATOM 17 N3 C B 582 -4.731 101.881 93.889 1.00 51.64 N
ATOM 18 C4 C B 582 -5.005 102.587 94.987 1.00 52.30 C
ATOM 19 N4 C B 582 -6.165 102.358 95.603 1.00 53.21 N
ATOM 20 C5 C B 582 -4.108 103.571 95.499 1.00 51.31 C
ATOM 21 C6 C B 582 -2.975 103.786 94.827 1.00 50.95 C
ATOM 22 P U B 583 -2.150 107.802 91.273 1.00 49.52 P
ATOM 23 OP1 U B 583 -1.551 108.672 90.228 1.00 49.77 O
ATOM 24 OP2 U B 583 -2.730 108.421 92.496 1.00 42.72 O
ATOM 25 O5' U B 583 -3.270 106.916 90.572 1.00 46.93 O
TER
ATOM 2 P C A 551 -15.038 97.183 96.660 1.00 54.91 P
ATOM 3 OP1 C A 551 -15.677 95.857 96.429 1.00 56.69 O
ATOM 4 OP2 C A 551 -14.756 97.641 98.045 1.00 54.31 O
ATOM 5 O5' C A 551 -13.686 97.212 95.821 1.00 55.89 O
ATOM 6 C5' C A 551 -13.672 96.802 94.439 1.00 53.66 C
ATOM 7 C4' C A 551 -12.295 96.988 93.848 1.00 52.20 C
ATOM 8 O4' C A 551 -11.933 98.392 93.878 1.00 51.90 O
ATOM 9 C3' C A 551 -11.158 96.301 94.583 1.00 51.54 C
ATOM 10 O3' C A 551 -11.063 94.940 94.200 1.00 52.13 O
ATOM 11 C2' C A 551 -9.951 97.101 94.114 1.00 52.02 C
ATOM 12 O2' C A 551 -9.524 96.728 92.816 1.00 50.91 O
ATOM 13 C1' C A 551 -10.533 98.516 94.058 1.00 51.44 C
ATOM 14 N1 C A 551 -10.283 99.318 95.270 1.00 53.85 N
ATOM 15 C2 C A 551 -9.174 100.171 95.292 1.00 54.51 C
ATOM 16 O2 C A 551 -8.420 100.203 94.305 1.00 55.34 O
ATOM 17 N3 C A 551 -8.947 100.933 96.388 1.00 54.50 N
ATOM 18 C4 C A 551 -9.769 100.855 97.437 1.00 54.44 C
ATOM 19 N4 C A 551 -9.507 101.626 98.494 1.00 52.93 N
ATOM 20 C5 C A 551 -10.896 99.986 97.448 1.00 53.55 C
ATOM 21 C6 C A 551 -11.115 99.243 96.355 1.00 53.50 C
ATOM 22 P G A 552 -10.772 93.823 95.310 1.00 56.31 P
ATOM 23 OP1 G A 552 -10.528 92.535 94.609 1.00 54.01 O
ATOM 24 OP2 G A 552 -11.843 93.915 96.337 1.00 56.53 O
ATOM 25 O5' G A 552 -9.414 94.297 95.992 1.00 57.31 O
TER
ATOM 1 O3' A B 581 0.300 105.975 97.690 1.00 49.61 O
ATOM 2 P C B 582 -0.740 106.898 96.888 1.00 47.91 P
ATOM 3 OP1 C B 582 -0.111 108.223 96.684 1.00 48.93 O
ATOM 4 OP2 C B 582 -2.054 106.823 97.558 1.00 51.33 O
ATOM 5 O5' C B 582 -0.878 106.175 95.478 1.00 47.44 O
ATOM 6 C5' C B 582 0.233 106.090 94.586 1.00 44.35 C
ATOM 7 C4' C B 582 -0.122 105.245 93.388 1.00 46.82 C
ATOM 8 O4' C B 582 -0.470 103.902 93.818 1.00 45.84 O
ATOM 9 C3' C B 582 -1.329 105.678 92.574 1.00 45.91 C
ATOM 10 O3' C B 582 -1.016 106.735 91.683 1.00 47.01 O
ATOM 11 C2' C B 582 -1.655 104.396 91.828 1.00 47.10 C
ATOM 12 O2' C B 582 -0.748 104.150 90.772 1.00 43.89 O
ATOM 13 C1' C B 582 -1.438 103.355 92.929 1.00 47.74 C
ATOM 14 N1 C B 582 -2.685 103.086 93.686 1.00 51.24 N
ATOM 15 C2 C B 582 -3.583 102.106 93.210 1.00 50.66 C
ATOM 16 O2 C B 582 -3.308 101.476 92.180 1.00 49.38 O
ATOM 17 N3 C B 582 -4.731 101.881 93.889 1.00 51.64 N
ATOM 18 C4 C B 582 -5.005 102.587 94.987 1.00 52.30 C
ATOM 19 N4 C B 582 -6.165 102.358 95.603 1.00 53.21 N
ATOM 20 C5 C B 582 -4.108 103.571 95.499 1.00 51.31 C
ATOM 21 C6 C B 582 -2.975 103.786 94.827 1.00 50.95 C
ATOM 22 P U B 583 -2.150 107.802 91.273 1.00 49.52 P
ATOM 23 OP1 U B 583 -1.551 108.672 90.228 1.00 49.77 O
ATOM 24 OP2 U B 583 -2.730 108.421 92.496 1.00 42.72 O
ATOM 25 O5' U B 583 -3.270 106.916 90.572 1.00 46.93 O
TER
Atoms:
C2: (-9.174,100.171,95.292)
OP1: (-15.677,95.857,96.429)
OP2: (-14.756,97.641,98.045)
C4: (-9.769,100.855,97.437)
O5': (-13.686,97.212,95.821)
C3': (-11.158,96.301,94.583)
C1': (-10.533,98.516,94.058)
O4': (-11.933,98.392,93.878)
C5': (-13.672,96.802,94.439)
P: (-15.038,97.183,96.660)
O2: (-8.420,100.203,94.305)
C4': (-12.295,96.988,93.848)
C2': (-9.951,97.101,94.114)
O2': (-9.524,96.728,92.816)
N1: (-10.283,99.318,95.270)
N3: (-8.947,100.933,96.388)
N4: (-9.507,101.626,98.494)
C6: (-11.115,99.243,96.355)
C5: (-10.896,99.986,97.448)
O3': (-11.063,94.940,94.200)
OP1: (-15.677,95.857,96.429)
OP2: (-14.756,97.641,98.045)
C4: (-9.769,100.855,97.437)
O5': (-13.686,97.212,95.821)
C3': (-11.158,96.301,94.583)
C1': (-10.533,98.516,94.058)
O4': (-11.933,98.392,93.878)
C5': (-13.672,96.802,94.439)
P: (-15.038,97.183,96.660)
O2: (-8.420,100.203,94.305)
C4': (-12.295,96.988,93.848)
C2': (-9.951,97.101,94.114)
O2': (-9.524,96.728,92.816)
N1: (-10.283,99.318,95.270)
N3: (-8.947,100.933,96.388)
N4: (-9.507,101.626,98.494)
C6: (-11.115,99.243,96.355)
C5: (-10.896,99.986,97.448)
O3': (-11.063,94.940,94.200)
C2: (-3.583,102.106,93.210)
OP1: (-0.111,108.223,96.684)
OP2: (-2.054,106.823,97.558)
C4: (-5.005,102.587,94.987)
O5': (-0.878,106.175,95.478)
C3': (-1.329,105.678,92.574)
C1': (-1.438,103.355,92.929)
O4': (-0.470,103.902,93.818)
C5': (0.233,106.090,94.586)
P: (-0.740,106.898,96.888)
O2: (-3.308,101.476,92.180)
C4': (-0.122,105.245,93.388)
C2': (-1.655,104.396,91.828)
O2': (-0.748,104.150,90.772)
N1: (-2.685,103.086,93.686)
N3: (-4.731,101.881,93.889)
N4: (-6.165,102.358,95.603)
C6: (-2.975,103.786,94.827)
C5: (-4.108,103.571,95.499)
O3': (-1.016,106.735,91.683)
OP1: (-0.111,108.223,96.684)
OP2: (-2.054,106.823,97.558)
C4: (-5.005,102.587,94.987)
O5': (-0.878,106.175,95.478)
C3': (-1.329,105.678,92.574)
C1': (-1.438,103.355,92.929)
O4': (-0.470,103.902,93.818)
C5': (0.233,106.090,94.586)
P: (-0.740,106.898,96.888)
O2: (-3.308,101.476,92.180)
C4': (-0.122,105.245,93.388)
C2': (-1.655,104.396,91.828)
O2': (-0.748,104.150,90.772)
N1: (-2.685,103.086,93.686)
N3: (-4.731,101.881,93.889)
N4: (-6.165,102.358,95.603)
C6: (-2.975,103.786,94.827)
C5: (-4.108,103.571,95.499)
O3': (-1.016,106.735,91.683)
Image (generated by PyMOL):