Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:92:924
Extra
PDB:
ATOM 1 O3' U A 1 54.393 12.221 103.206 1.00113.91 O
ATOM 2 P A A 2 54.587 13.342 102.065 1.00107.36 P
ATOM 3 OP1 A A 2 53.278 13.977 101.818 1.00107.09 O
ATOM 4 OP2 A A 2 55.326 12.733 100.930 1.00108.36 O
ATOM 5 O5' A A 2 55.558 14.409 102.736 1.00100.34 O
ATOM 6 C5' A A 2 55.113 15.733 103.064 1.00 88.88 C
ATOM 7 C4' A A 2 56.293 16.574 103.473 1.00 81.48 C
ATOM 8 O4' A A 2 56.959 15.940 104.592 1.00 79.64 O
ATOM 9 C3' A A 2 57.377 16.738 102.418 1.00 77.12 C
ATOM 10 O3' A A 2 58.103 17.941 102.649 1.00 69.92 O
ATOM 11 C2' A A 2 58.238 15.497 102.634 1.00 77.70 C
ATOM 12 O2' A A 2 59.587 15.671 102.250 1.00 78.73 O
ATOM 13 C1' A A 2 58.112 15.254 104.143 1.00 78.67 C
ATOM 14 N9 A A 2 57.934 13.837 104.483 1.00 79.70 N
ATOM 15 C8 A A 2 57.676 12.784 103.631 1.00 79.34 C
ATOM 16 N7 A A 2 57.552 11.630 104.236 1.00 78.68 N
ATOM 17 C5 A A 2 57.746 11.934 105.574 1.00 79.39 C
ATOM 18 C6 A A 2 57.743 11.138 106.729 1.00 79.72 C
ATOM 19 N6 A A 2 57.532 9.820 106.716 1.00 80.37 N
ATOM 20 N1 A A 2 57.967 11.747 107.912 1.00 80.08 N
ATOM 21 C2 A A 2 58.181 13.068 107.923 1.00 79.60 C
ATOM 22 N3 A A 2 58.210 13.925 106.906 1.00 80.32 N
ATOM 23 C4 A A 2 57.983 13.288 105.743 1.00 79.82 C
ATOM 24 P G A 3 57.849 19.226 101.715 1.00 62.44 P
ATOM 25 OP1 G A 3 58.981 20.146 101.960 1.00 64.13 O
ATOM 26 OP2 G A 3 56.462 19.695 101.952 1.00 62.80 O
ATOM 27 O5' G A 3 57.941 18.683 100.215 1.00 58.96 O
TER
ATOM 1 O3' U B 23 61.978 1.954 100.275 1.00120.50 O
ATOM 2 P G B 24 62.083 3.359 99.502 1.00115.80 P
ATOM 3 OP1 G B 24 62.808 3.112 98.224 1.00115.58 O
ATOM 4 OP2 G B 24 62.607 4.373 100.458 1.00116.13 O
ATOM 5 O5' G B 24 60.568 3.730 99.173 1.00110.51 O
ATOM 6 C5' G B 24 59.986 3.450 97.882 1.00102.37 C
ATOM 7 C4' G B 24 58.926 4.479 97.562 1.00 96.53 C
ATOM 8 O4' G B 24 57.903 4.426 98.593 1.00 95.26 O
ATOM 9 C3' G B 24 59.405 5.923 97.587 1.00 92.94 C
ATOM 10 O3' G B 24 60.005 6.311 96.357 1.00 87.93 O
ATOM 11 C2' G B 24 58.128 6.687 97.906 1.00 92.35 C
ATOM 12 O2' G B 24 57.274 6.853 96.791 1.00 91.03 O
ATOM 13 C1' G B 24 57.471 5.740 98.912 1.00 93.03 C
ATOM 14 N9 G B 24 57.843 6.020 100.299 1.00 92.09 N
ATOM 15 C8 G B 24 58.547 5.207 101.160 1.00 91.31 C
ATOM 16 N7 G B 24 58.708 5.732 102.345 1.00 91.03 N
ATOM 17 C5 G B 24 58.073 6.965 102.262 1.00 91.29 C
ATOM 18 C6 G B 24 57.906 7.987 103.240 1.00 90.57 C
ATOM 19 O6 G B 24 58.276 7.999 104.419 1.00 89.05 O
ATOM 20 N1 G B 24 57.217 9.078 102.722 1.00 90.57 N
ATOM 21 C2 G B 24 56.741 9.175 101.439 1.00 90.95 C
ATOM 22 N2 G B 24 56.117 10.312 101.126 1.00 91.05 N
ATOM 23 N3 G B 24 56.871 8.228 100.527 1.00 91.39 N
ATOM 24 C4 G B 24 57.544 7.160 101.003 1.00 91.55 C
ATOM 25 P C B 25 61.206 7.379 96.358 1.00 83.94 P
ATOM 26 OP1 C B 25 61.571 7.602 94.938 1.00 83.61 O
ATOM 27 OP2 C B 25 62.250 6.955 97.326 1.00 83.98 O
ATOM 28 O5' C B 25 60.531 8.705 96.922 1.00 81.12 O
TER
ATOM 2 P A A 2 54.587 13.342 102.065 1.00107.36 P
ATOM 3 OP1 A A 2 53.278 13.977 101.818 1.00107.09 O
ATOM 4 OP2 A A 2 55.326 12.733 100.930 1.00108.36 O
ATOM 5 O5' A A 2 55.558 14.409 102.736 1.00100.34 O
ATOM 6 C5' A A 2 55.113 15.733 103.064 1.00 88.88 C
ATOM 7 C4' A A 2 56.293 16.574 103.473 1.00 81.48 C
ATOM 8 O4' A A 2 56.959 15.940 104.592 1.00 79.64 O
ATOM 9 C3' A A 2 57.377 16.738 102.418 1.00 77.12 C
ATOM 10 O3' A A 2 58.103 17.941 102.649 1.00 69.92 O
ATOM 11 C2' A A 2 58.238 15.497 102.634 1.00 77.70 C
ATOM 12 O2' A A 2 59.587 15.671 102.250 1.00 78.73 O
ATOM 13 C1' A A 2 58.112 15.254 104.143 1.00 78.67 C
ATOM 14 N9 A A 2 57.934 13.837 104.483 1.00 79.70 N
ATOM 15 C8 A A 2 57.676 12.784 103.631 1.00 79.34 C
ATOM 16 N7 A A 2 57.552 11.630 104.236 1.00 78.68 N
ATOM 17 C5 A A 2 57.746 11.934 105.574 1.00 79.39 C
ATOM 18 C6 A A 2 57.743 11.138 106.729 1.00 79.72 C
ATOM 19 N6 A A 2 57.532 9.820 106.716 1.00 80.37 N
ATOM 20 N1 A A 2 57.967 11.747 107.912 1.00 80.08 N
ATOM 21 C2 A A 2 58.181 13.068 107.923 1.00 79.60 C
ATOM 22 N3 A A 2 58.210 13.925 106.906 1.00 80.32 N
ATOM 23 C4 A A 2 57.983 13.288 105.743 1.00 79.82 C
ATOM 24 P G A 3 57.849 19.226 101.715 1.00 62.44 P
ATOM 25 OP1 G A 3 58.981 20.146 101.960 1.00 64.13 O
ATOM 26 OP2 G A 3 56.462 19.695 101.952 1.00 62.80 O
ATOM 27 O5' G A 3 57.941 18.683 100.215 1.00 58.96 O
TER
ATOM 1 O3' U B 23 61.978 1.954 100.275 1.00120.50 O
ATOM 2 P G B 24 62.083 3.359 99.502 1.00115.80 P
ATOM 3 OP1 G B 24 62.808 3.112 98.224 1.00115.58 O
ATOM 4 OP2 G B 24 62.607 4.373 100.458 1.00116.13 O
ATOM 5 O5' G B 24 60.568 3.730 99.173 1.00110.51 O
ATOM 6 C5' G B 24 59.986 3.450 97.882 1.00102.37 C
ATOM 7 C4' G B 24 58.926 4.479 97.562 1.00 96.53 C
ATOM 8 O4' G B 24 57.903 4.426 98.593 1.00 95.26 O
ATOM 9 C3' G B 24 59.405 5.923 97.587 1.00 92.94 C
ATOM 10 O3' G B 24 60.005 6.311 96.357 1.00 87.93 O
ATOM 11 C2' G B 24 58.128 6.687 97.906 1.00 92.35 C
ATOM 12 O2' G B 24 57.274 6.853 96.791 1.00 91.03 O
ATOM 13 C1' G B 24 57.471 5.740 98.912 1.00 93.03 C
ATOM 14 N9 G B 24 57.843 6.020 100.299 1.00 92.09 N
ATOM 15 C8 G B 24 58.547 5.207 101.160 1.00 91.31 C
ATOM 16 N7 G B 24 58.708 5.732 102.345 1.00 91.03 N
ATOM 17 C5 G B 24 58.073 6.965 102.262 1.00 91.29 C
ATOM 18 C6 G B 24 57.906 7.987 103.240 1.00 90.57 C
ATOM 19 O6 G B 24 58.276 7.999 104.419 1.00 89.05 O
ATOM 20 N1 G B 24 57.217 9.078 102.722 1.00 90.57 N
ATOM 21 C2 G B 24 56.741 9.175 101.439 1.00 90.95 C
ATOM 22 N2 G B 24 56.117 10.312 101.126 1.00 91.05 N
ATOM 23 N3 G B 24 56.871 8.228 100.527 1.00 91.39 N
ATOM 24 C4 G B 24 57.544 7.160 101.003 1.00 91.55 C
ATOM 25 P C B 25 61.206 7.379 96.358 1.00 83.94 P
ATOM 26 OP1 C B 25 61.571 7.602 94.938 1.00 83.61 O
ATOM 27 OP2 C B 25 62.250 6.955 97.326 1.00 83.98 O
ATOM 28 O5' C B 25 60.531 8.705 96.922 1.00 81.12 O
TER
Atoms:
OP1: (53.278,13.977,101.818)
OP2: (55.326,12.733,100.930)
C3': (57.377,16.738,102.418)
C1': (58.112,15.254,104.143)
C5': (55.113,15.733,103.064)
O4': (56.959,15.940,104.592)
C8: (57.676,12.784,103.631)
O2': (59.587,15.671,102.250)
C6: (57.743,11.138,106.729)
C5: (57.746,11.934,105.574)
C4: (57.983,13.288,105.743)
P: (54.587,13.342,102.065)
C4': (56.293,16.574,103.473)
C2': (58.238,15.497,102.634)
C2: (58.181,13.068,107.923)
N1: (57.967,11.747,107.912)
N3: (58.210,13.925,106.906)
N6: (57.532,9.820,106.716)
N7: (57.552,11.630,104.236)
N9: (57.934,13.837,104.483)
O5': (55.558,14.409,102.736)
O3': (58.103,17.941,102.649)
OP2: (55.326,12.733,100.930)
C3': (57.377,16.738,102.418)
C1': (58.112,15.254,104.143)
C5': (55.113,15.733,103.064)
O4': (56.959,15.940,104.592)
C8: (57.676,12.784,103.631)
O2': (59.587,15.671,102.250)
C6: (57.743,11.138,106.729)
C5: (57.746,11.934,105.574)
C4: (57.983,13.288,105.743)
P: (54.587,13.342,102.065)
C4': (56.293,16.574,103.473)
C2': (58.238,15.497,102.634)
C2: (58.181,13.068,107.923)
N1: (57.967,11.747,107.912)
N3: (58.210,13.925,106.906)
N6: (57.532,9.820,106.716)
N7: (57.552,11.630,104.236)
N9: (57.934,13.837,104.483)
O5': (55.558,14.409,102.736)
O3': (58.103,17.941,102.649)
OP1: (62.808,3.112,98.224)
OP2: (62.607,4.373,100.458)
C3': (59.405,5.923,97.587)
C1': (57.471,5.740,98.912)
C5': (59.986,3.450,97.882)
O6: (58.276,7.999,104.419)
O4': (57.903,4.426,98.593)
C8: (58.547,5.207,101.160)
C2: (56.741,9.175,101.439)
C6: (57.906,7.987,103.240)
C5: (58.073,6.965,102.262)
C4: (57.544,7.160,101.003)
P: (62.083,3.359,99.502)
C4': (58.926,4.479,97.562)
C2': (58.128,6.687,97.906)
O2': (57.274,6.853,96.791)
N1: (57.217,9.078,102.722)
N2: (56.117,10.312,101.126)
N3: (56.871,8.228,100.527)
N7: (58.708,5.732,102.345)
N9: (57.843,6.020,100.299)
O5': (60.568,3.730,99.173)
O3': (60.005,6.311,96.357)
OP2: (62.607,4.373,100.458)
C3': (59.405,5.923,97.587)
C1': (57.471,5.740,98.912)
C5': (59.986,3.450,97.882)
O6: (58.276,7.999,104.419)
O4': (57.903,4.426,98.593)
C8: (58.547,5.207,101.160)
C2: (56.741,9.175,101.439)
C6: (57.906,7.987,103.240)
C5: (58.073,6.965,102.262)
C4: (57.544,7.160,101.003)
P: (62.083,3.359,99.502)
C4': (58.926,4.479,97.562)
C2': (58.128,6.687,97.906)
O2': (57.274,6.853,96.791)
N1: (57.217,9.078,102.722)
N2: (56.117,10.312,101.126)
N3: (56.871,8.228,100.527)
N7: (58.708,5.732,102.345)
N9: (57.843,6.020,100.299)
O5': (60.568,3.730,99.173)
O3': (60.005,6.311,96.357)
Image (generated by PyMOL):