Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0551:0582
Extra
PDB:
ATOM 1 O3' A A 550 -15.864 98.371 96.089 1.00 55.15 O
ATOM 2 P C A 551 -14.966 97.271 96.823 1.00 56.34 P
ATOM 3 OP1 C A 551 -15.579 95.925 96.643 1.00 57.66 O
ATOM 4 OP2 C A 551 -14.694 97.786 98.195 1.00 55.28 O
ATOM 5 O5' C A 551 -13.607 97.280 95.995 1.00 57.00 O
ATOM 6 C5' C A 551 -13.596 96.948 94.595 1.00 54.90 C
ATOM 7 C4' C A 551 -12.227 97.194 94.010 1.00 53.32 C
ATOM 8 O4' C A 551 -11.899 98.603 94.117 1.00 53.57 O
ATOM 9 C3' C A 551 -11.072 96.505 94.713 1.00 52.83 C
ATOM 10 O3' C A 551 -10.938 95.159 94.291 1.00 51.97 O
ATOM 11 C2' C A 551 -9.886 97.350 94.275 1.00 53.04 C
ATOM 12 O2' C A 551 -9.459 97.029 92.966 1.00 53.76 O
ATOM 13 C1' C A 551 -10.500 98.752 94.279 1.00 52.71 C
ATOM 14 N1 C A 551 -10.242 99.516 95.514 1.00 54.12 N
ATOM 15 C2 C A 551 -9.119 100.350 95.561 1.00 54.81 C
ATOM 16 O2 C A 551 -8.379 100.418 94.566 1.00 56.37 O
ATOM 17 N3 C A 551 -8.866 101.055 96.684 1.00 54.03 N
ATOM 18 C4 C A 551 -9.678 100.946 97.738 1.00 55.18 C
ATOM 19 N4 C A 551 -9.383 101.655 98.830 1.00 55.50 N
ATOM 20 C5 C A 551 -10.827 100.107 97.720 1.00 53.90 C
ATOM 21 C6 C A 551 -11.070 99.418 96.598 1.00 54.60 C
ATOM 22 P G A 552 -10.728 94.009 95.385 1.00 55.54 P
ATOM 23 OP1 G A 552 -10.604 92.709 94.672 1.00 54.83 O
ATOM 24 OP2 G A 552 -11.774 94.188 96.425 1.00 57.25 O
ATOM 25 O5' G A 552 -9.337 94.361 96.077 1.00 56.31 O
TER
ATOM 1 O3' A B 581 0.312 106.073 97.808 1.00 50.00 O
ATOM 2 P C B 582 -0.744 107.007 97.037 1.00 50.32 P
ATOM 3 OP1 C B 582 -0.134 108.348 96.838 1.00 49.25 O
ATOM 4 OP2 C B 582 -2.049 106.907 97.726 1.00 50.79 O
ATOM 5 O5' C B 582 -0.882 106.305 95.616 1.00 47.13 O
ATOM 6 C5' C B 582 0.235 106.226 94.732 1.00 43.98 C
ATOM 7 C4' C B 582 -0.103 105.378 93.530 1.00 46.80 C
ATOM 8 O4' C B 582 -0.423 104.024 93.955 1.00 45.13 O
ATOM 9 C3' C B 582 -1.310 105.796 92.704 1.00 46.01 C
ATOM 10 O3' C B 582 -0.993 106.855 91.810 1.00 47.34 O
ATOM 11 C2' C B 582 -1.616 104.504 91.964 1.00 46.50 C
ATOM 12 O2' C B 582 -0.695 104.257 90.925 1.00 43.01 O
ATOM 13 C1' C B 582 -1.385 103.467 93.067 1.00 47.04 C
ATOM 14 N1 C B 582 -2.625 103.167 93.827 1.00 49.80 N
ATOM 15 C2 C B 582 -3.545 102.225 93.309 1.00 49.16 C
ATOM 16 O2 C B 582 -3.287 101.641 92.245 1.00 47.72 O
ATOM 17 N3 C B 582 -4.690 101.983 93.988 1.00 50.10 N
ATOM 18 C4 C B 582 -4.939 102.632 95.128 1.00 50.07 C
ATOM 19 N4 C B 582 -6.096 102.395 95.742 1.00 51.04 N
ATOM 20 C5 C B 582 -4.017 103.566 95.684 1.00 49.43 C
ATOM 21 C6 C B 582 -2.890 103.801 95.010 1.00 49.62 C
ATOM 22 P U B 583 -2.117 107.943 91.413 1.00 49.29 P
ATOM 23 OP1 U B 583 -1.514 108.826 90.376 1.00 49.28 O
ATOM 24 OP2 U B 583 -2.685 108.556 92.643 1.00 44.44 O
ATOM 25 O5' U B 583 -3.240 107.073 90.696 1.00 47.27 O
TER
ATOM 2 P C A 551 -14.966 97.271 96.823 1.00 56.34 P
ATOM 3 OP1 C A 551 -15.579 95.925 96.643 1.00 57.66 O
ATOM 4 OP2 C A 551 -14.694 97.786 98.195 1.00 55.28 O
ATOM 5 O5' C A 551 -13.607 97.280 95.995 1.00 57.00 O
ATOM 6 C5' C A 551 -13.596 96.948 94.595 1.00 54.90 C
ATOM 7 C4' C A 551 -12.227 97.194 94.010 1.00 53.32 C
ATOM 8 O4' C A 551 -11.899 98.603 94.117 1.00 53.57 O
ATOM 9 C3' C A 551 -11.072 96.505 94.713 1.00 52.83 C
ATOM 10 O3' C A 551 -10.938 95.159 94.291 1.00 51.97 O
ATOM 11 C2' C A 551 -9.886 97.350 94.275 1.00 53.04 C
ATOM 12 O2' C A 551 -9.459 97.029 92.966 1.00 53.76 O
ATOM 13 C1' C A 551 -10.500 98.752 94.279 1.00 52.71 C
ATOM 14 N1 C A 551 -10.242 99.516 95.514 1.00 54.12 N
ATOM 15 C2 C A 551 -9.119 100.350 95.561 1.00 54.81 C
ATOM 16 O2 C A 551 -8.379 100.418 94.566 1.00 56.37 O
ATOM 17 N3 C A 551 -8.866 101.055 96.684 1.00 54.03 N
ATOM 18 C4 C A 551 -9.678 100.946 97.738 1.00 55.18 C
ATOM 19 N4 C A 551 -9.383 101.655 98.830 1.00 55.50 N
ATOM 20 C5 C A 551 -10.827 100.107 97.720 1.00 53.90 C
ATOM 21 C6 C A 551 -11.070 99.418 96.598 1.00 54.60 C
ATOM 22 P G A 552 -10.728 94.009 95.385 1.00 55.54 P
ATOM 23 OP1 G A 552 -10.604 92.709 94.672 1.00 54.83 O
ATOM 24 OP2 G A 552 -11.774 94.188 96.425 1.00 57.25 O
ATOM 25 O5' G A 552 -9.337 94.361 96.077 1.00 56.31 O
TER
ATOM 1 O3' A B 581 0.312 106.073 97.808 1.00 50.00 O
ATOM 2 P C B 582 -0.744 107.007 97.037 1.00 50.32 P
ATOM 3 OP1 C B 582 -0.134 108.348 96.838 1.00 49.25 O
ATOM 4 OP2 C B 582 -2.049 106.907 97.726 1.00 50.79 O
ATOM 5 O5' C B 582 -0.882 106.305 95.616 1.00 47.13 O
ATOM 6 C5' C B 582 0.235 106.226 94.732 1.00 43.98 C
ATOM 7 C4' C B 582 -0.103 105.378 93.530 1.00 46.80 C
ATOM 8 O4' C B 582 -0.423 104.024 93.955 1.00 45.13 O
ATOM 9 C3' C B 582 -1.310 105.796 92.704 1.00 46.01 C
ATOM 10 O3' C B 582 -0.993 106.855 91.810 1.00 47.34 O
ATOM 11 C2' C B 582 -1.616 104.504 91.964 1.00 46.50 C
ATOM 12 O2' C B 582 -0.695 104.257 90.925 1.00 43.01 O
ATOM 13 C1' C B 582 -1.385 103.467 93.067 1.00 47.04 C
ATOM 14 N1 C B 582 -2.625 103.167 93.827 1.00 49.80 N
ATOM 15 C2 C B 582 -3.545 102.225 93.309 1.00 49.16 C
ATOM 16 O2 C B 582 -3.287 101.641 92.245 1.00 47.72 O
ATOM 17 N3 C B 582 -4.690 101.983 93.988 1.00 50.10 N
ATOM 18 C4 C B 582 -4.939 102.632 95.128 1.00 50.07 C
ATOM 19 N4 C B 582 -6.096 102.395 95.742 1.00 51.04 N
ATOM 20 C5 C B 582 -4.017 103.566 95.684 1.00 49.43 C
ATOM 21 C6 C B 582 -2.890 103.801 95.010 1.00 49.62 C
ATOM 22 P U B 583 -2.117 107.943 91.413 1.00 49.29 P
ATOM 23 OP1 U B 583 -1.514 108.826 90.376 1.00 49.28 O
ATOM 24 OP2 U B 583 -2.685 108.556 92.643 1.00 44.44 O
ATOM 25 O5' U B 583 -3.240 107.073 90.696 1.00 47.27 O
TER
Atoms:
C2: (-9.119,100.350,95.561)
OP1: (-15.579,95.925,96.643)
OP2: (-14.694,97.786,98.195)
C4: (-9.678,100.946,97.738)
O5': (-13.607,97.280,95.995)
C3': (-11.072,96.505,94.713)
C1': (-10.500,98.752,94.279)
O4': (-11.899,98.603,94.117)
C5': (-13.596,96.948,94.595)
P: (-14.966,97.271,96.823)
O2: (-8.379,100.418,94.566)
C4': (-12.227,97.194,94.010)
C2': (-9.886,97.350,94.275)
O2': (-9.459,97.029,92.966)
N1: (-10.242,99.516,95.514)
N3: (-8.866,101.055,96.684)
N4: (-9.383,101.655,98.830)
C6: (-11.070,99.418,96.598)
C5: (-10.827,100.107,97.720)
O3': (-10.938,95.159,94.291)
OP1: (-15.579,95.925,96.643)
OP2: (-14.694,97.786,98.195)
C4: (-9.678,100.946,97.738)
O5': (-13.607,97.280,95.995)
C3': (-11.072,96.505,94.713)
C1': (-10.500,98.752,94.279)
O4': (-11.899,98.603,94.117)
C5': (-13.596,96.948,94.595)
P: (-14.966,97.271,96.823)
O2: (-8.379,100.418,94.566)
C4': (-12.227,97.194,94.010)
C2': (-9.886,97.350,94.275)
O2': (-9.459,97.029,92.966)
N1: (-10.242,99.516,95.514)
N3: (-8.866,101.055,96.684)
N4: (-9.383,101.655,98.830)
C6: (-11.070,99.418,96.598)
C5: (-10.827,100.107,97.720)
O3': (-10.938,95.159,94.291)
C2: (-3.545,102.225,93.309)
OP1: (-0.134,108.348,96.838)
OP2: (-2.049,106.907,97.726)
C4: (-4.939,102.632,95.128)
O5': (-0.882,106.305,95.616)
C3': (-1.310,105.796,92.704)
C1': (-1.385,103.467,93.067)
O4': (-0.423,104.024,93.955)
C5': (0.235,106.226,94.732)
P: (-0.744,107.007,97.037)
O2: (-3.287,101.641,92.245)
C4': (-0.103,105.378,93.530)
C2': (-1.616,104.504,91.964)
O2': (-0.695,104.257,90.925)
N1: (-2.625,103.167,93.827)
N3: (-4.690,101.983,93.988)
N4: (-6.096,102.395,95.742)
C6: (-2.890,103.801,95.010)
C5: (-4.017,103.566,95.684)
O3': (-0.993,106.855,91.810)
OP1: (-0.134,108.348,96.838)
OP2: (-2.049,106.907,97.726)
C4: (-4.939,102.632,95.128)
O5': (-0.882,106.305,95.616)
C3': (-1.310,105.796,92.704)
C1': (-1.385,103.467,93.067)
O4': (-0.423,104.024,93.955)
C5': (0.235,106.226,94.732)
P: (-0.744,107.007,97.037)
O2: (-3.287,101.641,92.245)
C4': (-0.103,105.378,93.530)
C2': (-1.616,104.504,91.964)
O2': (-0.695,104.257,90.925)
N1: (-2.625,103.167,93.827)
N3: (-4.690,101.983,93.988)
N4: (-6.096,102.395,95.742)
C6: (-2.890,103.801,95.010)
C5: (-4.017,103.566,95.684)
O3': (-0.993,106.855,91.810)
Image (generated by PyMOL):