Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A50:A48
Extra
PDB:
ATOM 1 O3' A A 49 4.682 -31.243 15.931 1.00 22.33 O
ATOM 2 P C A 50 4.989 -32.730 15.416 1.00 22.99 P
ATOM 3 OP1 C A 50 6.419 -32.795 15.016 1.00 24.07 O
ATOM 4 OP2 C A 50 3.939 -33.086 14.433 1.00 21.87 O
ATOM 5 O5' C A 50 4.818 -33.637 16.711 1.00 24.60 O
ATOM 6 C5' C A 50 5.459 -33.281 17.958 1.00 26.03 C
ATOM 7 C4' C A 50 6.301 -34.427 18.457 1.00 26.30 C
ATOM 8 O4' C A 50 5.454 -35.596 18.588 1.00 26.33 O
ATOM 9 C3' C A 50 7.410 -34.853 17.509 1.00 26.85 C
ATOM 10 O3' C A 50 8.586 -34.069 17.713 1.00 28.49 O
ATOM 11 C2' C A 50 7.591 -36.331 17.838 1.00 26.08 C
ATOM 12 O2' C A 50 8.400 -36.561 18.967 1.00 27.09 O
ATOM 13 C1' C A 50 6.160 -36.750 18.178 1.00 25.26 C
ATOM 14 N1 C A 50 5.466 -37.310 17.019 1.00 23.47 N
ATOM 15 C2 C A 50 5.755 -38.619 16.616 1.00 23.46 C
ATOM 16 O2 C A 50 6.574 -39.286 17.268 1.00 23.18 O
ATOM 17 N3 C A 50 5.133 -39.123 15.524 1.00 22.48 N
ATOM 18 C4 C A 50 4.259 -38.373 14.852 1.00 20.75 C
ATOM 19 N4 C A 50 3.688 -38.898 13.777 1.00 21.93 N
ATOM 20 C5 C A 50 3.938 -37.051 15.251 1.00 21.58 C
ATOM 21 C6 C A 50 4.556 -36.562 16.328 1.00 22.73 C
ATOM 22 P A A 51 9.667 -33.915 16.522 1.00 30.18 P
ATOM 23 OP1 A A 51 10.717 -32.980 17.010 1.00 29.57 O
ATOM 24 OP2 A A 51 8.960 -33.617 15.242 1.00 27.13 O
ATOM 25 O5' A A 51 10.300 -35.379 16.415 1.00 29.54 O
TER
ATOM 1 O3' G B 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 2 P A B 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 3 OP1 A B 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 4 OP2 A B 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 5 O5' A B 48 1.862 -34.536 21.405 1.00 23.07 O
ATOM 6 C5' A B 48 2.053 -33.202 20.862 1.00 20.74 C
ATOM 7 C4' A B 48 1.629 -33.167 19.409 1.00 19.04 C
ATOM 8 O4' A B 48 2.318 -34.228 18.715 1.00 18.42 O
ATOM 9 C3' A B 48 0.146 -33.406 19.174 1.00 19.12 C
ATOM 10 O3' A B 48 -0.207 -32.760 17.954 1.00 20.76 O
ATOM 11 C2' A B 48 0.072 -34.912 18.949 1.00 18.13 C
ATOM 12 O2' A B 48 -1.001 -35.293 18.112 1.00 18.38 O
ATOM 13 C1' A B 48 1.392 -35.180 18.234 1.00 17.29 C
ATOM 14 N9 A B 48 1.952 -36.508 18.483 1.00 15.24 N
ATOM 15 C8 A B 48 2.789 -36.874 19.504 1.00 15.24 C
ATOM 16 N7 A B 48 3.194 -38.115 19.434 1.00 16.76 N
ATOM 17 C5 A B 48 2.565 -38.603 18.302 1.00 14.11 C
ATOM 18 C6 A B 48 2.584 -39.857 17.688 1.00 15.18 C
ATOM 19 N6 A B 48 3.305 -40.885 18.139 1.00 14.64 N
ATOM 20 N1 A B 48 1.831 -40.026 16.580 1.00 14.65 N
ATOM 21 C2 A B 48 1.118 -38.994 16.134 1.00 13.26 C
ATOM 22 N3 A B 48 1.023 -37.765 16.622 1.00 14.00 N
ATOM 23 C4 A B 48 1.782 -37.632 17.720 1.00 13.05 C
ATOM 24 P A B 49 -0.604 -31.205 17.936 1.00 20.66 P
ATOM 25 OP1 A B 49 -0.754 -30.698 19.332 1.00 19.97 O
ATOM 26 OP2 A B 49 -1.747 -31.102 16.988 1.00 20.99 O
ATOM 27 O5' A B 49 0.662 -30.509 17.263 1.00 20.31 O
TER
ATOM 2 P C A 50 4.989 -32.730 15.416 1.00 22.99 P
ATOM 3 OP1 C A 50 6.419 -32.795 15.016 1.00 24.07 O
ATOM 4 OP2 C A 50 3.939 -33.086 14.433 1.00 21.87 O
ATOM 5 O5' C A 50 4.818 -33.637 16.711 1.00 24.60 O
ATOM 6 C5' C A 50 5.459 -33.281 17.958 1.00 26.03 C
ATOM 7 C4' C A 50 6.301 -34.427 18.457 1.00 26.30 C
ATOM 8 O4' C A 50 5.454 -35.596 18.588 1.00 26.33 O
ATOM 9 C3' C A 50 7.410 -34.853 17.509 1.00 26.85 C
ATOM 10 O3' C A 50 8.586 -34.069 17.713 1.00 28.49 O
ATOM 11 C2' C A 50 7.591 -36.331 17.838 1.00 26.08 C
ATOM 12 O2' C A 50 8.400 -36.561 18.967 1.00 27.09 O
ATOM 13 C1' C A 50 6.160 -36.750 18.178 1.00 25.26 C
ATOM 14 N1 C A 50 5.466 -37.310 17.019 1.00 23.47 N
ATOM 15 C2 C A 50 5.755 -38.619 16.616 1.00 23.46 C
ATOM 16 O2 C A 50 6.574 -39.286 17.268 1.00 23.18 O
ATOM 17 N3 C A 50 5.133 -39.123 15.524 1.00 22.48 N
ATOM 18 C4 C A 50 4.259 -38.373 14.852 1.00 20.75 C
ATOM 19 N4 C A 50 3.688 -38.898 13.777 1.00 21.93 N
ATOM 20 C5 C A 50 3.938 -37.051 15.251 1.00 21.58 C
ATOM 21 C6 C A 50 4.556 -36.562 16.328 1.00 22.73 C
ATOM 22 P A A 51 9.667 -33.915 16.522 1.00 30.18 P
ATOM 23 OP1 A A 51 10.717 -32.980 17.010 1.00 29.57 O
ATOM 24 OP2 A A 51 8.960 -33.617 15.242 1.00 27.13 O
ATOM 25 O5' A A 51 10.300 -35.379 16.415 1.00 29.54 O
TER
ATOM 1 O3' G B 47 1.996 -36.410 23.124 1.00 23.51 O
ATOM 2 P A B 48 2.029 -34.816 22.966 1.00 24.93 P
ATOM 3 OP1 A B 48 3.379 -34.383 23.388 1.00 24.77 O
ATOM 4 OP2 A B 48 0.837 -34.302 23.683 1.00 25.26 O
ATOM 5 O5' A B 48 1.862 -34.536 21.405 1.00 23.07 O
ATOM 6 C5' A B 48 2.053 -33.202 20.862 1.00 20.74 C
ATOM 7 C4' A B 48 1.629 -33.167 19.409 1.00 19.04 C
ATOM 8 O4' A B 48 2.318 -34.228 18.715 1.00 18.42 O
ATOM 9 C3' A B 48 0.146 -33.406 19.174 1.00 19.12 C
ATOM 10 O3' A B 48 -0.207 -32.760 17.954 1.00 20.76 O
ATOM 11 C2' A B 48 0.072 -34.912 18.949 1.00 18.13 C
ATOM 12 O2' A B 48 -1.001 -35.293 18.112 1.00 18.38 O
ATOM 13 C1' A B 48 1.392 -35.180 18.234 1.00 17.29 C
ATOM 14 N9 A B 48 1.952 -36.508 18.483 1.00 15.24 N
ATOM 15 C8 A B 48 2.789 -36.874 19.504 1.00 15.24 C
ATOM 16 N7 A B 48 3.194 -38.115 19.434 1.00 16.76 N
ATOM 17 C5 A B 48 2.565 -38.603 18.302 1.00 14.11 C
ATOM 18 C6 A B 48 2.584 -39.857 17.688 1.00 15.18 C
ATOM 19 N6 A B 48 3.305 -40.885 18.139 1.00 14.64 N
ATOM 20 N1 A B 48 1.831 -40.026 16.580 1.00 14.65 N
ATOM 21 C2 A B 48 1.118 -38.994 16.134 1.00 13.26 C
ATOM 22 N3 A B 48 1.023 -37.765 16.622 1.00 14.00 N
ATOM 23 C4 A B 48 1.782 -37.632 17.720 1.00 13.05 C
ATOM 24 P A B 49 -0.604 -31.205 17.936 1.00 20.66 P
ATOM 25 OP1 A B 49 -0.754 -30.698 19.332 1.00 19.97 O
ATOM 26 OP2 A B 49 -1.747 -31.102 16.988 1.00 20.99 O
ATOM 27 O5' A B 49 0.662 -30.509 17.263 1.00 20.31 O
TER
Atoms:
C2: (5.755,-38.619,16.616)
OP1: (6.419,-32.795,15.016)
OP2: (3.939,-33.086,14.433)
C4: (4.259,-38.373,14.852)
O5': (4.818,-33.637,16.711)
C3': (7.410,-34.853,17.509)
C1': (6.160,-36.750,18.178)
O4': (5.454,-35.596,18.588)
C5': (5.459,-33.281,17.958)
P: (4.989,-32.730,15.416)
O2: (6.574,-39.286,17.268)
C4': (6.301,-34.427,18.457)
C2': (7.591,-36.331,17.838)
O2': (8.400,-36.561,18.967)
N1: (5.466,-37.310,17.019)
N3: (5.133,-39.123,15.524)
N4: (3.688,-38.898,13.777)
C6: (4.556,-36.562,16.328)
C5: (3.938,-37.051,15.251)
O3': (8.586,-34.069,17.713)
OP1: (6.419,-32.795,15.016)
OP2: (3.939,-33.086,14.433)
C4: (4.259,-38.373,14.852)
O5': (4.818,-33.637,16.711)
C3': (7.410,-34.853,17.509)
C1': (6.160,-36.750,18.178)
O4': (5.454,-35.596,18.588)
C5': (5.459,-33.281,17.958)
P: (4.989,-32.730,15.416)
O2: (6.574,-39.286,17.268)
C4': (6.301,-34.427,18.457)
C2': (7.591,-36.331,17.838)
O2': (8.400,-36.561,18.967)
N1: (5.466,-37.310,17.019)
N3: (5.133,-39.123,15.524)
N4: (3.688,-38.898,13.777)
C6: (4.556,-36.562,16.328)
C5: (3.938,-37.051,15.251)
O3': (8.586,-34.069,17.713)
OP1: (3.379,-34.383,23.388)
OP2: (0.837,-34.302,23.683)
C3': (0.146,-33.406,19.174)
C1': (1.392,-35.180,18.234)
C5': (2.053,-33.202,20.862)
O4': (2.318,-34.228,18.715)
C8: (2.789,-36.874,19.504)
O2': (-1.001,-35.293,18.112)
C6: (2.584,-39.857,17.688)
C5: (2.565,-38.603,18.302)
C4: (1.782,-37.632,17.720)
P: (2.029,-34.816,22.966)
C4': (1.629,-33.167,19.409)
C2': (0.072,-34.912,18.949)
C2: (1.118,-38.994,16.134)
N1: (1.831,-40.026,16.580)
N3: (1.023,-37.765,16.622)
N6: (3.305,-40.885,18.139)
N7: (3.194,-38.115,19.434)
N9: (1.952,-36.508,18.483)
O5': (1.862,-34.536,21.405)
O3': (-0.207,-32.760,17.954)
OP2: (0.837,-34.302,23.683)
C3': (0.146,-33.406,19.174)
C1': (1.392,-35.180,18.234)
C5': (2.053,-33.202,20.862)
O4': (2.318,-34.228,18.715)
C8: (2.789,-36.874,19.504)
O2': (-1.001,-35.293,18.112)
C6: (2.584,-39.857,17.688)
C5: (2.565,-38.603,18.302)
C4: (1.782,-37.632,17.720)
P: (2.029,-34.816,22.966)
C4': (1.629,-33.167,19.409)
C2': (0.072,-34.912,18.949)
C2: (1.118,-38.994,16.134)
N1: (1.831,-40.026,16.580)
N3: (1.023,-37.765,16.622)
N6: (3.305,-40.885,18.139)
N7: (3.194,-38.115,19.434)
N9: (1.952,-36.508,18.483)
O5': (1.862,-34.536,21.405)
O3': (-0.207,-32.760,17.954)
Image (generated by PyMOL):