Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01425:01436
Extra
PDB:
ATOM 1 O3' A A1424 95.058 136.402 31.470 1.00 40.46 O
ATOM 2 P C A1425 94.728 134.838 31.630 1.00 41.86 P
ATOM 3 OP1 C A1425 94.814 134.239 30.271 1.00 42.23 O
ATOM 4 OP2 C A1425 93.467 134.718 32.412 1.00 40.59 O
ATOM 5 O5' C A1425 95.936 134.270 32.499 1.00 39.03 O
ATOM 6 C5' C A1425 97.261 134.216 31.951 1.00 37.15 C
ATOM 7 C4' C A1425 98.267 133.904 33.029 1.00 37.92 C
ATOM 8 O4' C A1425 98.197 134.920 34.062 1.00 39.51 O
ATOM 9 C3' C A1425 98.055 132.615 33.806 1.00 38.13 C
ATOM 10 O3' C A1425 98.536 131.489 33.099 1.00 38.94 O
ATOM 11 C2' C A1425 98.873 132.873 35.058 1.00 37.34 C
ATOM 12 O2' C A1425 100.257 132.711 34.843 1.00 37.84 O
ATOM 13 C1' C A1425 98.562 134.348 35.310 1.00 37.05 C
ATOM 14 N1 C A1425 97.446 134.506 36.254 1.00 35.94 N
ATOM 15 C2 C A1425 97.702 134.331 37.612 1.00 35.74 C
ATOM 16 O2 C A1425 98.857 134.080 37.972 1.00 37.13 O
ATOM 17 N3 C A1425 96.689 134.435 38.497 1.00 37.74 N
ATOM 18 C4 C A1425 95.455 134.703 38.068 1.00 37.97 C
ATOM 19 N4 C A1425 94.477 134.767 38.981 1.00 38.47 N
ATOM 20 C5 C A1425 95.165 134.908 36.687 1.00 37.07 C
ATOM 21 C6 C A1425 96.181 134.800 35.822 1.00 36.31 C
ATOM 22 P C A1426 97.577 130.228 32.872 1.00 39.27 P
ATOM 23 OP1 C A1426 98.182 129.407 31.796 1.00 38.33 O
ATOM 24 OP2 C A1426 96.170 130.707 32.741 1.00 38.48 O
ATOM 25 O5' C A1426 97.682 129.417 34.234 1.00 38.96 O
TER
ATOM 1 O3' A B1435 98.908 134.863 49.849 1.00 51.17 O
ATOM 2 P C B1436 99.465 136.273 49.315 1.00 52.88 P
ATOM 3 OP1 C B1436 100.284 136.808 50.434 1.00 52.57 O
ATOM 4 OP2 C B1436 98.327 137.066 48.793 1.00 52.49 O
ATOM 5 O5' C B1436 100.416 135.905 48.083 1.00 49.56 O
ATOM 6 C5' C B1436 101.721 135.356 48.314 1.00 46.46 C
ATOM 7 C4' C B1436 102.422 135.026 47.011 1.00 45.61 C
ATOM 8 O4' C B1436 101.535 134.270 46.154 1.00 45.15 O
ATOM 9 C3' C B1436 102.816 136.168 46.086 1.00 45.15 C
ATOM 10 O3' C B1436 103.995 136.838 46.528 1.00 44.30 O
ATOM 11 C2' C B1436 103.101 135.419 44.784 1.00 43.79 C
ATOM 12 O2' C B1436 104.381 134.824 44.756 1.00 42.54 O
ATOM 13 C1' C B1436 102.046 134.309 44.828 1.00 42.53 C
ATOM 14 N1 C B1436 100.944 134.520 43.872 1.00 38.79 N
ATOM 15 C2 C B1436 101.177 134.243 42.522 1.00 40.31 C
ATOM 16 O2 C B1436 102.293 133.810 42.182 1.00 42.31 O
ATOM 17 N3 C B1436 100.187 134.456 41.620 1.00 39.69 N
ATOM 18 C4 C B1436 99.007 134.930 42.027 1.00 38.00 C
ATOM 19 N4 C B1436 98.065 135.144 41.103 1.00 37.10 N
ATOM 20 C5 C B1436 98.740 135.209 43.398 1.00 35.72 C
ATOM 21 C6 C B1436 99.725 134.989 44.278 1.00 36.53 C
ATOM 22 P U B1437 104.216 138.387 46.162 1.00 44.72 P
ATOM 23 OP1 U B1437 105.518 138.774 46.758 1.00 43.77 O
ATOM 24 OP2 U B1437 102.993 139.159 46.514 1.00 41.46 O
ATOM 25 O5' U B1437 104.369 138.377 44.576 1.00 43.31 O
TER
ATOM 2 P C A1425 94.728 134.838 31.630 1.00 41.86 P
ATOM 3 OP1 C A1425 94.814 134.239 30.271 1.00 42.23 O
ATOM 4 OP2 C A1425 93.467 134.718 32.412 1.00 40.59 O
ATOM 5 O5' C A1425 95.936 134.270 32.499 1.00 39.03 O
ATOM 6 C5' C A1425 97.261 134.216 31.951 1.00 37.15 C
ATOM 7 C4' C A1425 98.267 133.904 33.029 1.00 37.92 C
ATOM 8 O4' C A1425 98.197 134.920 34.062 1.00 39.51 O
ATOM 9 C3' C A1425 98.055 132.615 33.806 1.00 38.13 C
ATOM 10 O3' C A1425 98.536 131.489 33.099 1.00 38.94 O
ATOM 11 C2' C A1425 98.873 132.873 35.058 1.00 37.34 C
ATOM 12 O2' C A1425 100.257 132.711 34.843 1.00 37.84 O
ATOM 13 C1' C A1425 98.562 134.348 35.310 1.00 37.05 C
ATOM 14 N1 C A1425 97.446 134.506 36.254 1.00 35.94 N
ATOM 15 C2 C A1425 97.702 134.331 37.612 1.00 35.74 C
ATOM 16 O2 C A1425 98.857 134.080 37.972 1.00 37.13 O
ATOM 17 N3 C A1425 96.689 134.435 38.497 1.00 37.74 N
ATOM 18 C4 C A1425 95.455 134.703 38.068 1.00 37.97 C
ATOM 19 N4 C A1425 94.477 134.767 38.981 1.00 38.47 N
ATOM 20 C5 C A1425 95.165 134.908 36.687 1.00 37.07 C
ATOM 21 C6 C A1425 96.181 134.800 35.822 1.00 36.31 C
ATOM 22 P C A1426 97.577 130.228 32.872 1.00 39.27 P
ATOM 23 OP1 C A1426 98.182 129.407 31.796 1.00 38.33 O
ATOM 24 OP2 C A1426 96.170 130.707 32.741 1.00 38.48 O
ATOM 25 O5' C A1426 97.682 129.417 34.234 1.00 38.96 O
TER
ATOM 1 O3' A B1435 98.908 134.863 49.849 1.00 51.17 O
ATOM 2 P C B1436 99.465 136.273 49.315 1.00 52.88 P
ATOM 3 OP1 C B1436 100.284 136.808 50.434 1.00 52.57 O
ATOM 4 OP2 C B1436 98.327 137.066 48.793 1.00 52.49 O
ATOM 5 O5' C B1436 100.416 135.905 48.083 1.00 49.56 O
ATOM 6 C5' C B1436 101.721 135.356 48.314 1.00 46.46 C
ATOM 7 C4' C B1436 102.422 135.026 47.011 1.00 45.61 C
ATOM 8 O4' C B1436 101.535 134.270 46.154 1.00 45.15 O
ATOM 9 C3' C B1436 102.816 136.168 46.086 1.00 45.15 C
ATOM 10 O3' C B1436 103.995 136.838 46.528 1.00 44.30 O
ATOM 11 C2' C B1436 103.101 135.419 44.784 1.00 43.79 C
ATOM 12 O2' C B1436 104.381 134.824 44.756 1.00 42.54 O
ATOM 13 C1' C B1436 102.046 134.309 44.828 1.00 42.53 C
ATOM 14 N1 C B1436 100.944 134.520 43.872 1.00 38.79 N
ATOM 15 C2 C B1436 101.177 134.243 42.522 1.00 40.31 C
ATOM 16 O2 C B1436 102.293 133.810 42.182 1.00 42.31 O
ATOM 17 N3 C B1436 100.187 134.456 41.620 1.00 39.69 N
ATOM 18 C4 C B1436 99.007 134.930 42.027 1.00 38.00 C
ATOM 19 N4 C B1436 98.065 135.144 41.103 1.00 37.10 N
ATOM 20 C5 C B1436 98.740 135.209 43.398 1.00 35.72 C
ATOM 21 C6 C B1436 99.725 134.989 44.278 1.00 36.53 C
ATOM 22 P U B1437 104.216 138.387 46.162 1.00 44.72 P
ATOM 23 OP1 U B1437 105.518 138.774 46.758 1.00 43.77 O
ATOM 24 OP2 U B1437 102.993 139.159 46.514 1.00 41.46 O
ATOM 25 O5' U B1437 104.369 138.377 44.576 1.00 43.31 O
TER
Atoms:
C2: (97.702,134.331,37.612)
OP1: (94.814,134.239,30.271)
OP2: (93.467,134.718,32.412)
C4: (95.455,134.703,38.068)
O5': (95.936,134.270,32.499)
C3': (98.055,132.615,33.806)
C1': (98.562,134.348,35.310)
O4': (98.197,134.920,34.062)
C5': (97.261,134.216,31.951)
P: (94.728,134.838,31.630)
O2: (98.857,134.080,37.972)
C4': (98.267,133.904,33.029)
C2': (98.873,132.873,35.058)
O2': (100.257,132.711,34.843)
N1: (97.446,134.506,36.254)
N3: (96.689,134.435,38.497)
N4: (94.477,134.767,38.981)
C6: (96.181,134.800,35.822)
C5: (95.165,134.908,36.687)
O3': (98.536,131.489,33.099)
OP1: (94.814,134.239,30.271)
OP2: (93.467,134.718,32.412)
C4: (95.455,134.703,38.068)
O5': (95.936,134.270,32.499)
C3': (98.055,132.615,33.806)
C1': (98.562,134.348,35.310)
O4': (98.197,134.920,34.062)
C5': (97.261,134.216,31.951)
P: (94.728,134.838,31.630)
O2: (98.857,134.080,37.972)
C4': (98.267,133.904,33.029)
C2': (98.873,132.873,35.058)
O2': (100.257,132.711,34.843)
N1: (97.446,134.506,36.254)
N3: (96.689,134.435,38.497)
N4: (94.477,134.767,38.981)
C6: (96.181,134.800,35.822)
C5: (95.165,134.908,36.687)
O3': (98.536,131.489,33.099)
C2: (101.177,134.243,42.522)
OP1: (100.284,136.808,50.434)
OP2: (98.327,137.066,48.793)
C4: (99.007,134.930,42.027)
O5': (100.416,135.905,48.083)
C3': (102.816,136.168,46.086)
C1': (102.046,134.309,44.828)
O4': (101.535,134.270,46.154)
C5': (101.721,135.356,48.314)
P: (99.465,136.273,49.315)
O2: (102.293,133.810,42.182)
C4': (102.422,135.026,47.011)
C2': (103.101,135.419,44.784)
O2': (104.381,134.824,44.756)
N1: (100.944,134.520,43.872)
N3: (100.187,134.456,41.620)
N4: (98.065,135.144,41.103)
C6: (99.725,134.989,44.278)
C5: (98.740,135.209,43.398)
O3': (103.995,136.838,46.528)
OP1: (100.284,136.808,50.434)
OP2: (98.327,137.066,48.793)
C4: (99.007,134.930,42.027)
O5': (100.416,135.905,48.083)
C3': (102.816,136.168,46.086)
C1': (102.046,134.309,44.828)
O4': (101.535,134.270,46.154)
C5': (101.721,135.356,48.314)
P: (99.465,136.273,49.315)
O2: (102.293,133.810,42.182)
C4': (102.422,135.026,47.011)
C2': (103.101,135.419,44.784)
O2': (104.381,134.824,44.756)
N1: (100.944,134.520,43.872)
N3: (100.187,134.456,41.620)
N4: (98.065,135.144,41.103)
C6: (99.725,134.989,44.278)
C5: (98.740,135.209,43.398)
O3': (103.995,136.838,46.528)
Image (generated by PyMOL):