Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.842 79.301 67.854 1.00 51.01 O
ATOM 2 P C A1234 5.121 79.452 66.283 1.00 51.59 P
ATOM 3 OP1 C A1234 4.470 78.307 65.599 1.00 54.92 O
ATOM 4 OP2 C A1234 6.569 79.682 66.095 1.00 51.33 O
ATOM 5 O5' C A1234 4.314 80.764 65.890 1.00 49.68 O
ATOM 6 C5' C A1234 2.887 80.746 65.869 1.00 50.99 C
ATOM 7 C4' C A1234 2.340 82.123 65.595 1.00 52.37 C
ATOM 8 O4' C A1234 2.734 83.012 66.668 1.00 53.98 O
ATOM 9 C3' C A1234 2.853 82.831 64.355 1.00 53.12 C
ATOM 10 O3' C A1234 2.238 82.368 63.162 1.00 54.04 O
ATOM 11 C2' C A1234 2.506 84.277 64.670 1.00 54.18 C
ATOM 12 O2' C A1234 1.149 84.600 64.480 1.00 55.62 O
ATOM 13 C1' C A1234 2.821 84.336 66.166 1.00 54.93 C
ATOM 14 N1 C A1234 4.178 84.863 66.404 1.00 55.02 N
ATOM 15 C2 C A1234 4.359 86.253 66.399 1.00 55.09 C
ATOM 16 O2 C A1234 3.364 86.992 66.262 1.00 54.45 O
ATOM 17 N3 C A1234 5.605 86.757 66.546 1.00 54.90 N
ATOM 18 C4 C A1234 6.640 85.934 66.704 1.00 54.50 C
ATOM 19 N4 C A1234 7.849 86.478 66.825 1.00 55.72 N
ATOM 20 C5 C A1234 6.481 84.516 66.741 1.00 54.69 C
ATOM 21 C6 C A1234 5.245 84.029 66.594 1.00 53.48 C
ATOM 22 P U A1235 3.133 82.138 61.846 1.00 56.12 P
ATOM 23 OP1 U A1235 2.249 81.729 60.724 1.00 57.30 O
ATOM 24 OP2 U A1235 4.273 81.269 62.224 1.00 55.62 O
ATOM 25 O5' U A1235 3.674 83.598 61.511 1.00 57.87 O
TER
ATOM 1 O3' A B1239 7.970 98.075 65.780 1.00 95.12 O
ATOM 2 P C B1240 7.359 97.952 67.264 1.00 94.25 P
ATOM 3 OP1 C B1240 7.350 99.309 67.871 1.00 93.67 O
ATOM 4 OP2 C B1240 8.040 96.832 67.970 1.00 94.55 O
ATOM 5 O5' C B1240 5.844 97.527 67.031 1.00 92.13 O
ATOM 6 C5' C B1240 5.082 96.959 68.102 1.00 88.01 C
ATOM 7 C4' C B1240 3.685 96.637 67.643 1.00 84.88 C
ATOM 8 O4' C B1240 3.723 95.729 66.510 1.00 83.95 O
ATOM 9 C3' C B1240 2.874 95.890 68.681 1.00 83.58 C
ATOM 10 O3' C B1240 2.321 96.781 69.627 1.00 82.39 O
ATOM 11 C2' C B1240 1.824 95.187 67.836 1.00 83.23 C
ATOM 12 O2' C B1240 0.771 96.049 67.444 1.00 83.33 O
ATOM 13 C1' C B1240 2.655 94.795 66.612 1.00 82.20 C
ATOM 14 N1 C B1240 3.226 93.434 66.703 1.00 79.46 N
ATOM 15 C2 C B1240 2.371 92.326 66.566 1.00 78.56 C
ATOM 16 O2 C B1240 1.150 92.518 66.403 1.00 78.68 O
ATOM 17 N3 C B1240 2.896 91.077 66.619 1.00 76.86 N
ATOM 18 C4 C B1240 4.209 90.912 66.808 1.00 75.29 C
ATOM 19 N4 C B1240 4.686 89.668 66.848 1.00 73.16 N
ATOM 20 C5 C B1240 5.092 92.017 66.966 1.00 76.05 C
ATOM 21 C6 C B1240 4.565 93.246 66.908 1.00 77.41 C
ATOM 22 P U B1241 2.252 96.350 71.164 1.00 81.12 P
ATOM 23 OP1 U B1241 1.378 97.341 71.842 1.00 82.01 O
ATOM 24 OP2 U B1241 3.635 96.128 71.654 1.00 80.03 O
ATOM 25 O5' U B1241 1.497 94.951 71.128 1.00 79.42 O
TER
ATOM 2 P C A1234 5.121 79.452 66.283 1.00 51.59 P
ATOM 3 OP1 C A1234 4.470 78.307 65.599 1.00 54.92 O
ATOM 4 OP2 C A1234 6.569 79.682 66.095 1.00 51.33 O
ATOM 5 O5' C A1234 4.314 80.764 65.890 1.00 49.68 O
ATOM 6 C5' C A1234 2.887 80.746 65.869 1.00 50.99 C
ATOM 7 C4' C A1234 2.340 82.123 65.595 1.00 52.37 C
ATOM 8 O4' C A1234 2.734 83.012 66.668 1.00 53.98 O
ATOM 9 C3' C A1234 2.853 82.831 64.355 1.00 53.12 C
ATOM 10 O3' C A1234 2.238 82.368 63.162 1.00 54.04 O
ATOM 11 C2' C A1234 2.506 84.277 64.670 1.00 54.18 C
ATOM 12 O2' C A1234 1.149 84.600 64.480 1.00 55.62 O
ATOM 13 C1' C A1234 2.821 84.336 66.166 1.00 54.93 C
ATOM 14 N1 C A1234 4.178 84.863 66.404 1.00 55.02 N
ATOM 15 C2 C A1234 4.359 86.253 66.399 1.00 55.09 C
ATOM 16 O2 C A1234 3.364 86.992 66.262 1.00 54.45 O
ATOM 17 N3 C A1234 5.605 86.757 66.546 1.00 54.90 N
ATOM 18 C4 C A1234 6.640 85.934 66.704 1.00 54.50 C
ATOM 19 N4 C A1234 7.849 86.478 66.825 1.00 55.72 N
ATOM 20 C5 C A1234 6.481 84.516 66.741 1.00 54.69 C
ATOM 21 C6 C A1234 5.245 84.029 66.594 1.00 53.48 C
ATOM 22 P U A1235 3.133 82.138 61.846 1.00 56.12 P
ATOM 23 OP1 U A1235 2.249 81.729 60.724 1.00 57.30 O
ATOM 24 OP2 U A1235 4.273 81.269 62.224 1.00 55.62 O
ATOM 25 O5' U A1235 3.674 83.598 61.511 1.00 57.87 O
TER
ATOM 1 O3' A B1239 7.970 98.075 65.780 1.00 95.12 O
ATOM 2 P C B1240 7.359 97.952 67.264 1.00 94.25 P
ATOM 3 OP1 C B1240 7.350 99.309 67.871 1.00 93.67 O
ATOM 4 OP2 C B1240 8.040 96.832 67.970 1.00 94.55 O
ATOM 5 O5' C B1240 5.844 97.527 67.031 1.00 92.13 O
ATOM 6 C5' C B1240 5.082 96.959 68.102 1.00 88.01 C
ATOM 7 C4' C B1240 3.685 96.637 67.643 1.00 84.88 C
ATOM 8 O4' C B1240 3.723 95.729 66.510 1.00 83.95 O
ATOM 9 C3' C B1240 2.874 95.890 68.681 1.00 83.58 C
ATOM 10 O3' C B1240 2.321 96.781 69.627 1.00 82.39 O
ATOM 11 C2' C B1240 1.824 95.187 67.836 1.00 83.23 C
ATOM 12 O2' C B1240 0.771 96.049 67.444 1.00 83.33 O
ATOM 13 C1' C B1240 2.655 94.795 66.612 1.00 82.20 C
ATOM 14 N1 C B1240 3.226 93.434 66.703 1.00 79.46 N
ATOM 15 C2 C B1240 2.371 92.326 66.566 1.00 78.56 C
ATOM 16 O2 C B1240 1.150 92.518 66.403 1.00 78.68 O
ATOM 17 N3 C B1240 2.896 91.077 66.619 1.00 76.86 N
ATOM 18 C4 C B1240 4.209 90.912 66.808 1.00 75.29 C
ATOM 19 N4 C B1240 4.686 89.668 66.848 1.00 73.16 N
ATOM 20 C5 C B1240 5.092 92.017 66.966 1.00 76.05 C
ATOM 21 C6 C B1240 4.565 93.246 66.908 1.00 77.41 C
ATOM 22 P U B1241 2.252 96.350 71.164 1.00 81.12 P
ATOM 23 OP1 U B1241 1.378 97.341 71.842 1.00 82.01 O
ATOM 24 OP2 U B1241 3.635 96.128 71.654 1.00 80.03 O
ATOM 25 O5' U B1241 1.497 94.951 71.128 1.00 79.42 O
TER
Atoms:
C2: (4.359,86.253,66.399)
OP1: (4.470,78.307,65.599)
OP2: (6.569,79.682,66.095)
C4: (6.640,85.934,66.704)
O5': (4.314,80.764,65.890)
C3': (2.853,82.831,64.355)
C1': (2.821,84.336,66.166)
O4': (2.734,83.012,66.668)
C5': (2.887,80.746,65.869)
P: (5.121,79.452,66.283)
O2: (3.364,86.992,66.262)
C4': (2.340,82.123,65.595)
C2': (2.506,84.277,64.670)
O2': (1.149,84.600,64.480)
N1: (4.178,84.863,66.404)
N3: (5.605,86.757,66.546)
N4: (7.849,86.478,66.825)
C6: (5.245,84.029,66.594)
C5: (6.481,84.516,66.741)
O3': (2.238,82.368,63.162)
OP1: (4.470,78.307,65.599)
OP2: (6.569,79.682,66.095)
C4: (6.640,85.934,66.704)
O5': (4.314,80.764,65.890)
C3': (2.853,82.831,64.355)
C1': (2.821,84.336,66.166)
O4': (2.734,83.012,66.668)
C5': (2.887,80.746,65.869)
P: (5.121,79.452,66.283)
O2: (3.364,86.992,66.262)
C4': (2.340,82.123,65.595)
C2': (2.506,84.277,64.670)
O2': (1.149,84.600,64.480)
N1: (4.178,84.863,66.404)
N3: (5.605,86.757,66.546)
N4: (7.849,86.478,66.825)
C6: (5.245,84.029,66.594)
C5: (6.481,84.516,66.741)
O3': (2.238,82.368,63.162)
C2: (2.371,92.326,66.566)
OP1: (7.350,99.309,67.871)
OP2: (8.040,96.832,67.970)
C4: (4.209,90.912,66.808)
O5': (5.844,97.527,67.031)
C3': (2.874,95.890,68.681)
C1': (2.655,94.795,66.612)
O4': (3.723,95.729,66.510)
C5': (5.082,96.959,68.102)
P: (7.359,97.952,67.264)
O2: (1.150,92.518,66.403)
C4': (3.685,96.637,67.643)
C2': (1.824,95.187,67.836)
O2': (0.771,96.049,67.444)
N1: (3.226,93.434,66.703)
N3: (2.896,91.077,66.619)
N4: (4.686,89.668,66.848)
C6: (4.565,93.246,66.908)
C5: (5.092,92.017,66.966)
O3': (2.321,96.781,69.627)
OP1: (7.350,99.309,67.871)
OP2: (8.040,96.832,67.970)
C4: (4.209,90.912,66.808)
O5': (5.844,97.527,67.031)
C3': (2.874,95.890,68.681)
C1': (2.655,94.795,66.612)
O4': (3.723,95.729,66.510)
C5': (5.082,96.959,68.102)
P: (7.359,97.952,67.264)
O2: (1.150,92.518,66.403)
C4': (3.685,96.637,67.643)
C2': (1.824,95.187,67.836)
O2': (0.771,96.049,67.444)
N1: (3.226,93.434,66.703)
N3: (2.896,91.077,66.619)
N4: (4.686,89.668,66.848)
C6: (4.565,93.246,66.908)
C5: (5.092,92.017,66.966)
O3': (2.321,96.781,69.627)
Image (generated by PyMOL):