Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0279:0349
Extra
PDB:
ATOM 1 O3' C A 278 60.629 127.736 -1.891 1.00 97.86 O
ATOM 2 P C A 279 59.491 128.198 -0.851 1.00 96.55 P
ATOM 3 OP1 C A 279 59.232 129.641 -1.089 1.00 96.49 O
ATOM 4 OP2 C A 279 59.887 127.743 0.506 1.00 96.85 O
ATOM 5 O5' C A 279 58.202 127.374 -1.300 1.00 94.71 O
ATOM 6 C5' C A 279 57.596 127.595 -2.588 1.00 92.11 C
ATOM 7 C4' C A 279 56.387 126.704 -2.763 1.00 90.58 C
ATOM 8 O4' C A 279 56.796 125.312 -2.771 1.00 89.65 O
ATOM 9 C3' C A 279 55.334 126.784 -1.668 1.00 89.44 C
ATOM 10 O3' C A 279 54.454 127.885 -1.888 1.00 89.59 O
ATOM 11 C2' C A 279 54.617 125.445 -1.809 1.00 89.25 C
ATOM 12 O2' C A 279 53.653 125.439 -2.843 1.00 87.22 O
ATOM 13 C1' C A 279 55.774 124.515 -2.192 1.00 89.32 C
ATOM 14 N1 C A 279 56.349 123.742 -1.073 1.00 89.52 N
ATOM 15 C2 C A 279 55.668 122.596 -0.613 1.00 89.47 C
ATOM 16 O2 C A 279 54.580 122.287 -1.130 1.00 89.19 O
ATOM 17 N3 C A 279 56.213 121.862 0.386 1.00 89.79 N
ATOM 18 C4 C A 279 57.377 122.231 0.930 1.00 90.29 C
ATOM 19 N4 C A 279 57.883 121.469 1.905 1.00 90.28 N
ATOM 20 C5 C A 279 58.077 123.398 0.497 1.00 90.12 C
ATOM 21 C6 C A 279 57.532 124.116 -0.495 1.00 90.10 C
ATOM 22 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 23 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 24 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 25 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
TER
ATOM 1 O3' A B 348 53.187 112.931 4.570 1.00103.33 O
ATOM 2 P C B 349 53.954 112.583 3.203 1.00105.28 P
ATOM 3 OP1 C B 349 53.980 111.101 3.090 1.00105.62 O
ATOM 4 OP2 C B 349 55.232 113.344 3.187 1.00105.20 O
ATOM 5 O5' C B 349 53.001 113.161 2.062 1.00104.87 O
ATOM 6 C5' C B 349 51.670 112.638 1.872 1.00105.58 C
ATOM 7 C4' C B 349 50.866 113.552 0.974 1.00106.48 C
ATOM 8 O4' C B 349 50.773 114.869 1.587 1.00106.71 O
ATOM 9 C3' C B 349 51.455 113.834 -0.400 1.00107.04 C
ATOM 10 O3' C B 349 51.190 112.785 -1.330 1.00108.39 O
ATOM 11 C2' C B 349 50.774 115.146 -0.772 1.00106.26 C
ATOM 12 O2' C B 349 49.435 114.975 -1.193 1.00105.67 O
ATOM 13 C1' C B 349 50.775 115.869 0.576 1.00105.96 C
ATOM 14 N1 C B 349 51.961 116.733 0.764 1.00105.54 N
ATOM 15 C2 C B 349 51.889 118.079 0.363 1.00105.30 C
ATOM 16 O2 C B 349 50.830 118.509 -0.130 1.00104.71 O
ATOM 17 N3 C B 349 52.975 118.875 0.525 1.00105.25 N
ATOM 18 C4 C B 349 54.094 118.380 1.064 1.00105.18 C
ATOM 19 N4 C B 349 55.138 119.202 1.208 1.00104.62 N
ATOM 20 C5 C B 349 54.193 117.019 1.480 1.00104.94 C
ATOM 21 C6 C B 349 53.115 116.240 1.314 1.00105.14 C
ATOM 22 P G B 350 52.279 112.429 -2.465 1.00109.13 P
ATOM 23 OP1 G B 350 51.683 111.367 -3.324 1.00109.09 O
ATOM 24 OP2 G B 350 53.594 112.186 -1.806 1.00107.66 O
ATOM 25 O5' G B 350 52.383 113.766 -3.333 1.00108.89 O
TER
ATOM 2 P C A 279 59.491 128.198 -0.851 1.00 96.55 P
ATOM 3 OP1 C A 279 59.232 129.641 -1.089 1.00 96.49 O
ATOM 4 OP2 C A 279 59.887 127.743 0.506 1.00 96.85 O
ATOM 5 O5' C A 279 58.202 127.374 -1.300 1.00 94.71 O
ATOM 6 C5' C A 279 57.596 127.595 -2.588 1.00 92.11 C
ATOM 7 C4' C A 279 56.387 126.704 -2.763 1.00 90.58 C
ATOM 8 O4' C A 279 56.796 125.312 -2.771 1.00 89.65 O
ATOM 9 C3' C A 279 55.334 126.784 -1.668 1.00 89.44 C
ATOM 10 O3' C A 279 54.454 127.885 -1.888 1.00 89.59 O
ATOM 11 C2' C A 279 54.617 125.445 -1.809 1.00 89.25 C
ATOM 12 O2' C A 279 53.653 125.439 -2.843 1.00 87.22 O
ATOM 13 C1' C A 279 55.774 124.515 -2.192 1.00 89.32 C
ATOM 14 N1 C A 279 56.349 123.742 -1.073 1.00 89.52 N
ATOM 15 C2 C A 279 55.668 122.596 -0.613 1.00 89.47 C
ATOM 16 O2 C A 279 54.580 122.287 -1.130 1.00 89.19 O
ATOM 17 N3 C A 279 56.213 121.862 0.386 1.00 89.79 N
ATOM 18 C4 C A 279 57.377 122.231 0.930 1.00 90.29 C
ATOM 19 N4 C A 279 57.883 121.469 1.905 1.00 90.28 N
ATOM 20 C5 C A 279 58.077 123.398 0.497 1.00 90.12 C
ATOM 21 C6 C A 279 57.532 124.116 -0.495 1.00 90.10 C
ATOM 22 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 23 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 24 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 25 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
TER
ATOM 1 O3' A B 348 53.187 112.931 4.570 1.00103.33 O
ATOM 2 P C B 349 53.954 112.583 3.203 1.00105.28 P
ATOM 3 OP1 C B 349 53.980 111.101 3.090 1.00105.62 O
ATOM 4 OP2 C B 349 55.232 113.344 3.187 1.00105.20 O
ATOM 5 O5' C B 349 53.001 113.161 2.062 1.00104.87 O
ATOM 6 C5' C B 349 51.670 112.638 1.872 1.00105.58 C
ATOM 7 C4' C B 349 50.866 113.552 0.974 1.00106.48 C
ATOM 8 O4' C B 349 50.773 114.869 1.587 1.00106.71 O
ATOM 9 C3' C B 349 51.455 113.834 -0.400 1.00107.04 C
ATOM 10 O3' C B 349 51.190 112.785 -1.330 1.00108.39 O
ATOM 11 C2' C B 349 50.774 115.146 -0.772 1.00106.26 C
ATOM 12 O2' C B 349 49.435 114.975 -1.193 1.00105.67 O
ATOM 13 C1' C B 349 50.775 115.869 0.576 1.00105.96 C
ATOM 14 N1 C B 349 51.961 116.733 0.764 1.00105.54 N
ATOM 15 C2 C B 349 51.889 118.079 0.363 1.00105.30 C
ATOM 16 O2 C B 349 50.830 118.509 -0.130 1.00104.71 O
ATOM 17 N3 C B 349 52.975 118.875 0.525 1.00105.25 N
ATOM 18 C4 C B 349 54.094 118.380 1.064 1.00105.18 C
ATOM 19 N4 C B 349 55.138 119.202 1.208 1.00104.62 N
ATOM 20 C5 C B 349 54.193 117.019 1.480 1.00104.94 C
ATOM 21 C6 C B 349 53.115 116.240 1.314 1.00105.14 C
ATOM 22 P G B 350 52.279 112.429 -2.465 1.00109.13 P
ATOM 23 OP1 G B 350 51.683 111.367 -3.324 1.00109.09 O
ATOM 24 OP2 G B 350 53.594 112.186 -1.806 1.00107.66 O
ATOM 25 O5' G B 350 52.383 113.766 -3.333 1.00108.89 O
TER
Atoms:
C2: (55.668,122.596,-0.613)
OP1: (59.232,129.641,-1.089)
OP2: (59.887,127.743,0.506)
C4: (57.377,122.231,0.930)
O5': (58.202,127.374,-1.300)
C3': (55.334,126.784,-1.668)
C1': (55.774,124.515,-2.192)
O4': (56.796,125.312,-2.771)
C5': (57.596,127.595,-2.588)
P: (59.491,128.198,-0.851)
O2: (54.580,122.287,-1.130)
C4': (56.387,126.704,-2.763)
C2': (54.617,125.445,-1.809)
O2': (53.653,125.439,-2.843)
N1: (56.349,123.742,-1.073)
N3: (56.213,121.862,0.386)
N4: (57.883,121.469,1.905)
C6: (57.532,124.116,-0.495)
C5: (58.077,123.398,0.497)
O3': (54.454,127.885,-1.888)
OP1: (59.232,129.641,-1.089)
OP2: (59.887,127.743,0.506)
C4: (57.377,122.231,0.930)
O5': (58.202,127.374,-1.300)
C3': (55.334,126.784,-1.668)
C1': (55.774,124.515,-2.192)
O4': (56.796,125.312,-2.771)
C5': (57.596,127.595,-2.588)
P: (59.491,128.198,-0.851)
O2: (54.580,122.287,-1.130)
C4': (56.387,126.704,-2.763)
C2': (54.617,125.445,-1.809)
O2': (53.653,125.439,-2.843)
N1: (56.349,123.742,-1.073)
N3: (56.213,121.862,0.386)
N4: (57.883,121.469,1.905)
C6: (57.532,124.116,-0.495)
C5: (58.077,123.398,0.497)
O3': (54.454,127.885,-1.888)
C2: (51.889,118.079,0.363)
OP1: (53.980,111.101,3.090)
OP2: (55.232,113.344,3.187)
C4: (54.094,118.380,1.064)
O5': (53.001,113.161,2.062)
C3': (51.455,113.834,-0.400)
C1': (50.775,115.869,0.576)
O4': (50.773,114.869,1.587)
C5': (51.670,112.638,1.872)
P: (53.954,112.583,3.203)
O2: (50.830,118.509,-0.130)
C4': (50.866,113.552,0.974)
C2': (50.774,115.146,-0.772)
O2': (49.435,114.975,-1.193)
N1: (51.961,116.733,0.764)
N3: (52.975,118.875,0.525)
N4: (55.138,119.202,1.208)
C6: (53.115,116.240,1.314)
C5: (54.193,117.019,1.480)
O3': (51.190,112.785,-1.330)
OP1: (53.980,111.101,3.090)
OP2: (55.232,113.344,3.187)
C4: (54.094,118.380,1.064)
O5': (53.001,113.161,2.062)
C3': (51.455,113.834,-0.400)
C1': (50.775,115.869,0.576)
O4': (50.773,114.869,1.587)
C5': (51.670,112.638,1.872)
P: (53.954,112.583,3.203)
O2: (50.830,118.509,-0.130)
C4': (50.866,113.552,0.974)
C2': (50.774,115.146,-0.772)
O2': (49.435,114.975,-1.193)
N1: (51.961,116.733,0.764)
N3: (52.975,118.875,0.525)
N4: (55.138,119.202,1.208)
C6: (53.115,116.240,1.314)
C5: (54.193,117.019,1.480)
O3': (51.190,112.785,-1.330)
Image (generated by PyMOL):