ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCL:0279:0349

Extra

PDB:
ATOM 1 O3' C A 278 61.604 128.452 -1.764 1.00 86.41 O
ATOM 2 P C A 279 60.562 128.952 -0.646 1.00 85.06 P
ATOM 3 OP1 C A 279 60.437 130.421 -0.786 1.00 85.35 O
ATOM 4 OP2 C A 279 60.973 128.375 0.659 1.00 85.89 O
ATOM 5 O5' C A 279 59.174 128.295 -1.079 1.00 84.20 O
ATOM 6 C5' C A 279 58.583 128.594 -2.358 1.00 82.47 C
ATOM 7 C4' C A 279 57.374 127.718 -2.604 1.00 81.79 C
ATOM 8 O4' C A 279 57.767 126.319 -2.619 1.00 82.14 O
ATOM 9 C3' C A 279 56.279 127.775 -1.553 1.00 80.60 C
ATOM 10 O3' C A 279 55.424 128.887 -1.761 1.00 79.05 O
ATOM 11 C2' C A 279 55.542 126.461 -1.784 1.00 80.87 C
ATOM 12 O2' C A 279 54.653 126.528 -2.880 1.00 80.91 O
ATOM 13 C1' C A 279 56.700 125.521 -2.128 1.00 80.95 C
ATOM 14 N1 C A 279 57.191 124.728 -0.989 1.00 79.81 N
ATOM 15 C2 C A 279 56.376 123.714 -0.471 1.00 78.83 C
ATOM 16 O2 C A 279 55.249 123.541 -0.957 1.00 77.47 O
ATOM 17 N3 C A 279 56.836 122.954 0.549 1.00 79.66 N
ATOM 18 C4 C A 279 58.050 123.184 1.059 1.00 80.36 C
ATOM 19 N4 C A 279 58.471 122.400 2.059 1.00 80.30 N
ATOM 20 C5 C A 279 58.890 124.225 0.565 1.00 80.07 C
ATOM 21 C6 C A 279 58.426 124.964 -0.449 1.00 79.65 C
ATOM 22 P G A 280 54.831 129.676 -0.499 1.00 78.10 P
ATOM 23 OP1 G A 280 53.835 130.652 -1.008 1.00 77.98 O
ATOM 24 OP2 G A 280 55.981 130.150 0.310 1.00 77.87 O
ATOM 25 O5' G A 280 54.048 128.560 0.326 1.00 78.34 O
TER

ATOM 1 O3' A B 348 54.091 113.890 4.991 1.00 82.34 O
ATOM 2 P C B 349 54.911 113.527 3.666 1.00 83.29 P
ATOM 3 OP1 C B 349 55.022 112.048 3.622 1.00 82.72 O
ATOM 4 OP2 C B 349 56.142 114.358 3.648 1.00 83.82 O
ATOM 5 O5' C B 349 53.956 114.024 2.492 1.00 83.42 O
ATOM 6 C5' C B 349 52.642 113.468 2.330 1.00 84.21 C
ATOM 7 C4' C B 349 51.823 114.323 1.398 1.00 86.10 C
ATOM 8 O4' C B 349 51.633 115.632 1.995 1.00 85.82 O
ATOM 9 C3' C B 349 52.444 114.633 0.044 1.00 88.23 C
ATOM 10 O3' C B 349 52.290 113.566 -0.890 1.00 91.59 O
ATOM 11 C2' C B 349 51.678 115.883 -0.367 1.00 86.76 C
ATOM 12 O2' C B 349 50.377 115.588 -0.838 1.00 85.30 O
ATOM 13 C1' C B 349 51.576 116.616 0.973 1.00 85.77 C
ATOM 14 N1 C B 349 52.681 117.565 1.183 1.00 84.73 N
ATOM 15 C2 C B 349 52.570 118.858 0.654 1.00 83.85 C
ATOM 16 O2 C B 349 51.535 119.170 0.043 1.00 82.46 O
ATOM 17 N3 C B 349 53.590 119.733 0.825 1.00 83.63 N
ATOM 18 C4 C B 349 54.684 119.360 1.497 1.00 84.22 C
ATOM 19 N4 C B 349 55.670 120.254 1.635 1.00 82.95 N
ATOM 20 C5 C B 349 54.817 118.052 2.056 1.00 84.61 C
ATOM 21 C6 C B 349 53.802 117.196 1.876 1.00 84.65 C
ATOM 22 P G B 350 53.448 113.282 -1.974 1.00 93.57 P
ATOM 23 OP1 G B 350 52.983 112.149 -2.815 1.00 93.70 O
ATOM 24 OP2 G B 350 54.757 113.186 -1.274 1.00 92.41 O
ATOM 25 O5' G B 350 53.454 114.597 -2.873 1.00 93.98 O
TER

Atoms:
C2: (56.376,123.714,-0.471)
OP1: (60.437,130.421,-0.786)
OP2: (60.973,128.375,0.659)
C4: (58.050,123.184,1.059)
O5': (59.174,128.295,-1.079)
C3': (56.279,127.775,-1.553)
C1': (56.700,125.521,-2.128)
O4': (57.767,126.319,-2.619)
C5': (58.583,128.594,-2.358)
P: (60.562,128.952,-0.646)
O2: (55.249,123.541,-0.957)
C4': (57.374,127.718,-2.604)
C2': (55.542,126.461,-1.784)
O2': (54.653,126.528,-2.880)
N1: (57.191,124.728,-0.989)
N3: (56.836,122.954,0.549)
N4: (58.471,122.400,2.059)
C6: (58.426,124.964,-0.449)
C5: (58.890,124.225,0.565)
O3': (55.424,128.887,-1.761)
C2: (52.570,118.858,0.654)
OP1: (55.022,112.048,3.622)
OP2: (56.142,114.358,3.648)
C4: (54.684,119.360,1.497)
O5': (53.956,114.024,2.492)
C3': (52.444,114.633,0.044)
C1': (51.576,116.616,0.973)
O4': (51.633,115.632,1.995)
C5': (52.642,113.468,2.330)
P: (54.911,113.527,3.666)
O2: (51.535,119.170,0.043)
C4': (51.823,114.323,1.398)
C2': (51.678,115.883,-0.367)
O2': (50.377,115.588,-0.838)
N1: (52.681,117.565,1.183)
N3: (53.590,119.733,0.825)
N4: (55.670,120.254,1.635)
C6: (53.802,117.196,1.876)
C5: (54.817,118.052,2.056)
O3': (52.290,113.566,-0.890)
Image (generated by PyMOL):
PyMOL image
show in jmol