Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.196 99.406 122.396 1.00 70.34 O
ATOM 2 P C A 559 -4.677 98.473 123.609 1.00 73.48 P
ATOM 3 OP1 C A 559 -4.107 99.042 124.862 1.00 72.75 O
ATOM 4 OP2 C A 559 -4.395 97.057 123.246 1.00 71.87 O
ATOM 5 O5' C A 559 -6.255 98.687 123.637 1.00 73.29 O
ATOM 6 C5' C A 559 -6.820 99.977 123.954 1.00 75.77 C
ATOM 7 C4' C A 559 -8.324 99.923 123.848 1.00 76.38 C
ATOM 8 O4' C A 559 -8.685 99.570 122.486 1.00 75.75 O
ATOM 9 C3' C A 559 -8.974 98.843 124.696 1.00 77.68 C
ATOM 10 O3' C A 559 -9.171 99.264 126.039 1.00 79.82 O
ATOM 11 C2' C A 559 -10.272 98.573 123.949 1.00 76.34 C
ATOM 12 O2' C A 559 -11.264 99.550 124.205 1.00 76.16 O
ATOM 13 C1' C A 559 -9.798 98.691 122.498 1.00 74.82 C
ATOM 14 N1 C A 559 -9.379 97.408 121.904 1.00 72.53 N
ATOM 15 C2 C A 559 -10.349 96.591 121.311 1.00 71.89 C
ATOM 16 O2 C A 559 -11.532 96.962 121.317 1.00 71.40 O
ATOM 17 N3 C A 559 -9.973 95.417 120.747 1.00 71.82 N
ATOM 18 C4 C A 559 -8.689 95.049 120.762 1.00 70.58 C
ATOM 19 N4 C A 559 -8.363 93.887 120.183 1.00 68.42 N
ATOM 20 C5 C A 559 -7.681 95.858 121.369 1.00 70.57 C
ATOM 21 C6 C A 559 -8.066 97.017 121.921 1.00 71.15 C
ATOM 22 P G A 560 -9.048 98.192 127.227 1.00 82.11 P
ATOM 23 OP1 G A 560 -9.538 98.843 128.470 1.00 81.19 O
ATOM 24 OP2 G A 560 -7.679 97.615 127.193 1.00 82.22 O
ATOM 25 O5' G A 560 -10.091 97.059 126.813 1.00 82.24 O
TER
ATOM 1 O3' C B 573 -10.539 84.489 116.757 1.00 65.45 O
ATOM 2 P C B 574 -10.567 85.353 115.403 1.00 66.51 P
ATOM 3 OP1 C B 574 -11.560 84.734 114.481 1.00 64.62 O
ATOM 4 OP2 C B 574 -9.157 85.496 114.960 1.00 68.54 O
ATOM 5 O5' C B 574 -11.117 86.777 115.864 1.00 62.16 O
ATOM 6 C5' C B 574 -12.498 86.951 116.181 1.00 60.71 C
ATOM 7 C4' C B 574 -12.736 88.321 116.740 1.00 60.46 C
ATOM 8 O4' C B 574 -11.905 88.503 117.909 1.00 62.44 O
ATOM 9 C3' C B 574 -12.357 89.471 115.833 1.00 62.60 C
ATOM 10 O3' C B 574 -13.401 89.748 114.908 1.00 65.13 O
ATOM 11 C2' C B 574 -12.141 90.609 116.825 1.00 63.23 C
ATOM 12 O2' C B 574 -13.343 91.225 117.243 1.00 62.61 O
ATOM 13 C1' C B 574 -11.502 89.863 118.002 1.00 63.80 C
ATOM 14 N1 C B 574 -10.022 89.919 118.020 1.00 65.39 N
ATOM 15 C2 C B 574 -9.384 91.053 118.560 1.00 65.37 C
ATOM 16 O2 C B 574 -10.073 91.984 119.008 1.00 64.89 O
ATOM 17 N3 C B 574 -8.032 91.105 118.571 1.00 66.35 N
ATOM 18 C4 C B 574 -7.319 90.094 118.061 1.00 67.11 C
ATOM 19 N4 C B 574 -5.987 90.200 118.070 1.00 68.09 N
ATOM 20 C5 C B 574 -7.938 88.932 117.512 1.00 65.79 C
ATOM 21 C6 C B 574 -9.276 88.886 117.514 1.00 65.50 C
ATOM 22 P A B 575 -13.043 90.217 113.413 1.00 66.89 P
ATOM 23 OP1 A B 575 -12.285 91.493 113.517 1.00 67.80 O
ATOM 24 OP2 A B 575 -14.282 90.175 112.598 1.00 67.13 O
ATOM 25 O5' A B 575 -12.066 89.080 112.879 1.00 64.64 O
TER
ATOM 2 P C A 559 -4.677 98.473 123.609 1.00 73.48 P
ATOM 3 OP1 C A 559 -4.107 99.042 124.862 1.00 72.75 O
ATOM 4 OP2 C A 559 -4.395 97.057 123.246 1.00 71.87 O
ATOM 5 O5' C A 559 -6.255 98.687 123.637 1.00 73.29 O
ATOM 6 C5' C A 559 -6.820 99.977 123.954 1.00 75.77 C
ATOM 7 C4' C A 559 -8.324 99.923 123.848 1.00 76.38 C
ATOM 8 O4' C A 559 -8.685 99.570 122.486 1.00 75.75 O
ATOM 9 C3' C A 559 -8.974 98.843 124.696 1.00 77.68 C
ATOM 10 O3' C A 559 -9.171 99.264 126.039 1.00 79.82 O
ATOM 11 C2' C A 559 -10.272 98.573 123.949 1.00 76.34 C
ATOM 12 O2' C A 559 -11.264 99.550 124.205 1.00 76.16 O
ATOM 13 C1' C A 559 -9.798 98.691 122.498 1.00 74.82 C
ATOM 14 N1 C A 559 -9.379 97.408 121.904 1.00 72.53 N
ATOM 15 C2 C A 559 -10.349 96.591 121.311 1.00 71.89 C
ATOM 16 O2 C A 559 -11.532 96.962 121.317 1.00 71.40 O
ATOM 17 N3 C A 559 -9.973 95.417 120.747 1.00 71.82 N
ATOM 18 C4 C A 559 -8.689 95.049 120.762 1.00 70.58 C
ATOM 19 N4 C A 559 -8.363 93.887 120.183 1.00 68.42 N
ATOM 20 C5 C A 559 -7.681 95.858 121.369 1.00 70.57 C
ATOM 21 C6 C A 559 -8.066 97.017 121.921 1.00 71.15 C
ATOM 22 P G A 560 -9.048 98.192 127.227 1.00 82.11 P
ATOM 23 OP1 G A 560 -9.538 98.843 128.470 1.00 81.19 O
ATOM 24 OP2 G A 560 -7.679 97.615 127.193 1.00 82.22 O
ATOM 25 O5' G A 560 -10.091 97.059 126.813 1.00 82.24 O
TER
ATOM 1 O3' C B 573 -10.539 84.489 116.757 1.00 65.45 O
ATOM 2 P C B 574 -10.567 85.353 115.403 1.00 66.51 P
ATOM 3 OP1 C B 574 -11.560 84.734 114.481 1.00 64.62 O
ATOM 4 OP2 C B 574 -9.157 85.496 114.960 1.00 68.54 O
ATOM 5 O5' C B 574 -11.117 86.777 115.864 1.00 62.16 O
ATOM 6 C5' C B 574 -12.498 86.951 116.181 1.00 60.71 C
ATOM 7 C4' C B 574 -12.736 88.321 116.740 1.00 60.46 C
ATOM 8 O4' C B 574 -11.905 88.503 117.909 1.00 62.44 O
ATOM 9 C3' C B 574 -12.357 89.471 115.833 1.00 62.60 C
ATOM 10 O3' C B 574 -13.401 89.748 114.908 1.00 65.13 O
ATOM 11 C2' C B 574 -12.141 90.609 116.825 1.00 63.23 C
ATOM 12 O2' C B 574 -13.343 91.225 117.243 1.00 62.61 O
ATOM 13 C1' C B 574 -11.502 89.863 118.002 1.00 63.80 C
ATOM 14 N1 C B 574 -10.022 89.919 118.020 1.00 65.39 N
ATOM 15 C2 C B 574 -9.384 91.053 118.560 1.00 65.37 C
ATOM 16 O2 C B 574 -10.073 91.984 119.008 1.00 64.89 O
ATOM 17 N3 C B 574 -8.032 91.105 118.571 1.00 66.35 N
ATOM 18 C4 C B 574 -7.319 90.094 118.061 1.00 67.11 C
ATOM 19 N4 C B 574 -5.987 90.200 118.070 1.00 68.09 N
ATOM 20 C5 C B 574 -7.938 88.932 117.512 1.00 65.79 C
ATOM 21 C6 C B 574 -9.276 88.886 117.514 1.00 65.50 C
ATOM 22 P A B 575 -13.043 90.217 113.413 1.00 66.89 P
ATOM 23 OP1 A B 575 -12.285 91.493 113.517 1.00 67.80 O
ATOM 24 OP2 A B 575 -14.282 90.175 112.598 1.00 67.13 O
ATOM 25 O5' A B 575 -12.066 89.080 112.879 1.00 64.64 O
TER
Atoms:
C2: (-10.349,96.591,121.311)
OP1: (-4.107,99.042,124.862)
OP2: (-4.395,97.057,123.246)
C4: (-8.689,95.049,120.762)
O5': (-6.255,98.687,123.637)
C3': (-8.974,98.843,124.696)
C1': (-9.798,98.691,122.498)
O4': (-8.685,99.570,122.486)
C5': (-6.820,99.977,123.954)
P: (-4.677,98.473,123.609)
O2: (-11.532,96.962,121.317)
C4': (-8.324,99.923,123.848)
C2': (-10.272,98.573,123.949)
O2': (-11.264,99.550,124.205)
N1: (-9.379,97.408,121.904)
N3: (-9.973,95.417,120.747)
N4: (-8.363,93.887,120.183)
C6: (-8.066,97.017,121.921)
C5: (-7.681,95.858,121.369)
O3': (-9.171,99.264,126.039)
OP1: (-4.107,99.042,124.862)
OP2: (-4.395,97.057,123.246)
C4: (-8.689,95.049,120.762)
O5': (-6.255,98.687,123.637)
C3': (-8.974,98.843,124.696)
C1': (-9.798,98.691,122.498)
O4': (-8.685,99.570,122.486)
C5': (-6.820,99.977,123.954)
P: (-4.677,98.473,123.609)
O2: (-11.532,96.962,121.317)
C4': (-8.324,99.923,123.848)
C2': (-10.272,98.573,123.949)
O2': (-11.264,99.550,124.205)
N1: (-9.379,97.408,121.904)
N3: (-9.973,95.417,120.747)
N4: (-8.363,93.887,120.183)
C6: (-8.066,97.017,121.921)
C5: (-7.681,95.858,121.369)
O3': (-9.171,99.264,126.039)
C2: (-9.384,91.053,118.560)
OP1: (-11.560,84.734,114.481)
OP2: (-9.157,85.496,114.960)
C4: (-7.319,90.094,118.061)
O5': (-11.117,86.777,115.864)
C3': (-12.357,89.471,115.833)
C1': (-11.502,89.863,118.002)
O4': (-11.905,88.503,117.909)
C5': (-12.498,86.951,116.181)
P: (-10.567,85.353,115.403)
O2: (-10.073,91.984,119.008)
C4': (-12.736,88.321,116.740)
C2': (-12.141,90.609,116.825)
O2': (-13.343,91.225,117.243)
N1: (-10.022,89.919,118.020)
N3: (-8.032,91.105,118.571)
N4: (-5.987,90.200,118.070)
C6: (-9.276,88.886,117.514)
C5: (-7.938,88.932,117.512)
O3': (-13.401,89.748,114.908)
OP1: (-11.560,84.734,114.481)
OP2: (-9.157,85.496,114.960)
C4: (-7.319,90.094,118.061)
O5': (-11.117,86.777,115.864)
C3': (-12.357,89.471,115.833)
C1': (-11.502,89.863,118.002)
O4': (-11.905,88.503,117.909)
C5': (-12.498,86.951,116.181)
P: (-10.567,85.353,115.403)
O2: (-10.073,91.984,119.008)
C4': (-12.736,88.321,116.740)
C2': (-12.141,90.609,116.825)
O2': (-13.343,91.225,117.243)
N1: (-10.022,89.919,118.020)
N3: (-8.032,91.105,118.571)
N4: (-5.987,90.200,118.070)
C6: (-9.276,88.886,117.514)
C5: (-7.938,88.932,117.512)
O3': (-13.401,89.748,114.908)
Image (generated by PyMOL):