Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0551:0582
Extra
PDB:
ATOM 1 O3' A A 550 -15.879 98.852 95.925 1.00 49.85 O
ATOM 2 P C A 551 -15.016 97.712 96.649 1.00 50.90 P
ATOM 3 OP1 C A 551 -15.699 96.406 96.429 1.00 51.10 O
ATOM 4 OP2 C A 551 -14.727 98.175 98.033 1.00 48.39 O
ATOM 5 O5' C A 551 -13.657 97.677 95.820 1.00 50.65 O
ATOM 6 C5' C A 551 -13.652 97.294 94.433 1.00 48.50 C
ATOM 7 C4' C A 551 -12.277 97.484 93.841 1.00 47.84 C
ATOM 8 O4' C A 551 -11.918 98.890 93.879 1.00 47.06 O
ATOM 9 C3' C A 551 -11.137 96.797 94.572 1.00 47.40 C
ATOM 10 O3' C A 551 -11.026 95.432 94.196 1.00 45.43 O
ATOM 11 C2' C A 551 -9.929 97.604 94.117 1.00 47.82 C
ATOM 12 O2' C A 551 -9.475 97.222 92.834 1.00 48.83 O
ATOM 13 C1' C A 551 -10.519 99.014 94.050 1.00 47.49 C
ATOM 14 N1 C A 551 -10.257 99.840 95.242 1.00 49.76 N
ATOM 15 C2 C A 551 -9.161 100.707 95.224 1.00 49.53 C
ATOM 16 O2 C A 551 -8.430 100.729 94.221 1.00 50.81 O
ATOM 17 N3 C A 551 -8.921 101.496 96.296 1.00 49.16 N
ATOM 18 C4 C A 551 -9.720 101.433 97.362 1.00 49.89 C
ATOM 19 N4 C A 551 -9.448 102.238 98.393 1.00 49.49 N
ATOM 20 C5 C A 551 -10.835 100.546 97.417 1.00 48.77 C
ATOM 21 C6 C A 551 -11.066 99.776 96.345 1.00 49.04 C
ATOM 22 P G A 552 -10.699 94.328 95.311 1.00 48.81 P
ATOM 23 OP1 G A 552 -10.514 93.024 94.619 1.00 47.26 O
ATOM 24 OP2 G A 552 -11.713 94.454 96.394 1.00 48.00 O
ATOM 25 O5' G A 552 -9.300 94.786 95.929 1.00 49.34 O
TER
ATOM 1 O3' A B 581 0.374 106.388 97.638 1.00 44.11 O
ATOM 2 P C B 582 -0.671 107.315 96.845 1.00 42.42 P
ATOM 3 OP1 C B 582 -0.016 108.627 96.620 1.00 40.45 O
ATOM 4 OP2 C B 582 -1.972 107.269 97.541 1.00 43.59 O
ATOM 5 O5' C B 582 -0.835 106.580 95.444 1.00 40.34 O
ATOM 6 C5' C B 582 0.281 106.436 94.565 1.00 38.04 C
ATOM 7 C4' C B 582 -0.083 105.579 93.379 1.00 39.14 C
ATOM 8 O4' C B 582 -0.440 104.247 93.827 1.00 39.33 O
ATOM 9 C3' C B 582 -1.277 106.012 92.544 1.00 37.85 C
ATOM 10 O3' C B 582 -0.938 107.030 91.618 1.00 37.22 O
ATOM 11 C2' C B 582 -1.617 104.720 91.823 1.00 40.24 C
ATOM 12 O2' C B 582 -0.713 104.469 90.766 1.00 37.38 O
ATOM 13 C1' C B 582 -1.402 103.693 92.940 1.00 41.60 C
ATOM 14 N1 C B 582 -2.644 103.416 93.700 1.00 45.92 N
ATOM 15 C2 C B 582 -3.531 102.416 93.236 1.00 46.67 C
ATOM 16 O2 C B 582 -3.238 101.762 92.221 1.00 46.18 O
ATOM 17 N3 C B 582 -4.682 102.194 93.912 1.00 47.73 N
ATOM 18 C4 C B 582 -4.965 102.913 95.002 1.00 48.30 C
ATOM 19 N4 C B 582 -6.124 102.684 95.617 1.00 49.34 N
ATOM 20 C5 C B 582 -4.075 103.910 95.506 1.00 46.33 C
ATOM 21 C6 C B 582 -2.942 104.127 94.833 1.00 45.53 C
ATOM 22 P U B 583 -2.039 108.117 91.189 1.00 39.50 P
ATOM 23 OP1 U B 583 -1.413 108.982 90.161 1.00 40.82 O
ATOM 24 OP2 U B 583 -2.617 108.734 92.405 1.00 36.76 O
ATOM 25 O5' U B 583 -3.183 107.258 90.494 1.00 37.95 O
TER
ATOM 2 P C A 551 -15.016 97.712 96.649 1.00 50.90 P
ATOM 3 OP1 C A 551 -15.699 96.406 96.429 1.00 51.10 O
ATOM 4 OP2 C A 551 -14.727 98.175 98.033 1.00 48.39 O
ATOM 5 O5' C A 551 -13.657 97.677 95.820 1.00 50.65 O
ATOM 6 C5' C A 551 -13.652 97.294 94.433 1.00 48.50 C
ATOM 7 C4' C A 551 -12.277 97.484 93.841 1.00 47.84 C
ATOM 8 O4' C A 551 -11.918 98.890 93.879 1.00 47.06 O
ATOM 9 C3' C A 551 -11.137 96.797 94.572 1.00 47.40 C
ATOM 10 O3' C A 551 -11.026 95.432 94.196 1.00 45.43 O
ATOM 11 C2' C A 551 -9.929 97.604 94.117 1.00 47.82 C
ATOM 12 O2' C A 551 -9.475 97.222 92.834 1.00 48.83 O
ATOM 13 C1' C A 551 -10.519 99.014 94.050 1.00 47.49 C
ATOM 14 N1 C A 551 -10.257 99.840 95.242 1.00 49.76 N
ATOM 15 C2 C A 551 -9.161 100.707 95.224 1.00 49.53 C
ATOM 16 O2 C A 551 -8.430 100.729 94.221 1.00 50.81 O
ATOM 17 N3 C A 551 -8.921 101.496 96.296 1.00 49.16 N
ATOM 18 C4 C A 551 -9.720 101.433 97.362 1.00 49.89 C
ATOM 19 N4 C A 551 -9.448 102.238 98.393 1.00 49.49 N
ATOM 20 C5 C A 551 -10.835 100.546 97.417 1.00 48.77 C
ATOM 21 C6 C A 551 -11.066 99.776 96.345 1.00 49.04 C
ATOM 22 P G A 552 -10.699 94.328 95.311 1.00 48.81 P
ATOM 23 OP1 G A 552 -10.514 93.024 94.619 1.00 47.26 O
ATOM 24 OP2 G A 552 -11.713 94.454 96.394 1.00 48.00 O
ATOM 25 O5' G A 552 -9.300 94.786 95.929 1.00 49.34 O
TER
ATOM 1 O3' A B 581 0.374 106.388 97.638 1.00 44.11 O
ATOM 2 P C B 582 -0.671 107.315 96.845 1.00 42.42 P
ATOM 3 OP1 C B 582 -0.016 108.627 96.620 1.00 40.45 O
ATOM 4 OP2 C B 582 -1.972 107.269 97.541 1.00 43.59 O
ATOM 5 O5' C B 582 -0.835 106.580 95.444 1.00 40.34 O
ATOM 6 C5' C B 582 0.281 106.436 94.565 1.00 38.04 C
ATOM 7 C4' C B 582 -0.083 105.579 93.379 1.00 39.14 C
ATOM 8 O4' C B 582 -0.440 104.247 93.827 1.00 39.33 O
ATOM 9 C3' C B 582 -1.277 106.012 92.544 1.00 37.85 C
ATOM 10 O3' C B 582 -0.938 107.030 91.618 1.00 37.22 O
ATOM 11 C2' C B 582 -1.617 104.720 91.823 1.00 40.24 C
ATOM 12 O2' C B 582 -0.713 104.469 90.766 1.00 37.38 O
ATOM 13 C1' C B 582 -1.402 103.693 92.940 1.00 41.60 C
ATOM 14 N1 C B 582 -2.644 103.416 93.700 1.00 45.92 N
ATOM 15 C2 C B 582 -3.531 102.416 93.236 1.00 46.67 C
ATOM 16 O2 C B 582 -3.238 101.762 92.221 1.00 46.18 O
ATOM 17 N3 C B 582 -4.682 102.194 93.912 1.00 47.73 N
ATOM 18 C4 C B 582 -4.965 102.913 95.002 1.00 48.30 C
ATOM 19 N4 C B 582 -6.124 102.684 95.617 1.00 49.34 N
ATOM 20 C5 C B 582 -4.075 103.910 95.506 1.00 46.33 C
ATOM 21 C6 C B 582 -2.942 104.127 94.833 1.00 45.53 C
ATOM 22 P U B 583 -2.039 108.117 91.189 1.00 39.50 P
ATOM 23 OP1 U B 583 -1.413 108.982 90.161 1.00 40.82 O
ATOM 24 OP2 U B 583 -2.617 108.734 92.405 1.00 36.76 O
ATOM 25 O5' U B 583 -3.183 107.258 90.494 1.00 37.95 O
TER
Atoms:
C2: (-9.161,100.707,95.224)
OP1: (-15.699,96.406,96.429)
OP2: (-14.727,98.175,98.033)
C4: (-9.720,101.433,97.362)
O5': (-13.657,97.677,95.820)
C3': (-11.137,96.797,94.572)
C1': (-10.519,99.014,94.050)
O4': (-11.918,98.890,93.879)
C5': (-13.652,97.294,94.433)
P: (-15.016,97.712,96.649)
O2: (-8.430,100.729,94.221)
C4': (-12.277,97.484,93.841)
C2': (-9.929,97.604,94.117)
O2': (-9.475,97.222,92.834)
N1: (-10.257,99.840,95.242)
N3: (-8.921,101.496,96.296)
N4: (-9.448,102.238,98.393)
C6: (-11.066,99.776,96.345)
C5: (-10.835,100.546,97.417)
O3': (-11.026,95.432,94.196)
OP1: (-15.699,96.406,96.429)
OP2: (-14.727,98.175,98.033)
C4: (-9.720,101.433,97.362)
O5': (-13.657,97.677,95.820)
C3': (-11.137,96.797,94.572)
C1': (-10.519,99.014,94.050)
O4': (-11.918,98.890,93.879)
C5': (-13.652,97.294,94.433)
P: (-15.016,97.712,96.649)
O2: (-8.430,100.729,94.221)
C4': (-12.277,97.484,93.841)
C2': (-9.929,97.604,94.117)
O2': (-9.475,97.222,92.834)
N1: (-10.257,99.840,95.242)
N3: (-8.921,101.496,96.296)
N4: (-9.448,102.238,98.393)
C6: (-11.066,99.776,96.345)
C5: (-10.835,100.546,97.417)
O3': (-11.026,95.432,94.196)
C2: (-3.531,102.416,93.236)
OP1: (-0.016,108.627,96.620)
OP2: (-1.972,107.269,97.541)
C4: (-4.965,102.913,95.002)
O5': (-0.835,106.580,95.444)
C3': (-1.277,106.012,92.544)
C1': (-1.402,103.693,92.940)
O4': (-0.440,104.247,93.827)
C5': (0.281,106.436,94.565)
P: (-0.671,107.315,96.845)
O2: (-3.238,101.762,92.221)
C4': (-0.083,105.579,93.379)
C2': (-1.617,104.720,91.823)
O2': (-0.713,104.469,90.766)
N1: (-2.644,103.416,93.700)
N3: (-4.682,102.194,93.912)
N4: (-6.124,102.684,95.617)
C6: (-2.942,104.127,94.833)
C5: (-4.075,103.910,95.506)
O3': (-0.938,107.030,91.618)
OP1: (-0.016,108.627,96.620)
OP2: (-1.972,107.269,97.541)
C4: (-4.965,102.913,95.002)
O5': (-0.835,106.580,95.444)
C3': (-1.277,106.012,92.544)
C1': (-1.402,103.693,92.940)
O4': (-0.440,104.247,93.827)
C5': (0.281,106.436,94.565)
P: (-0.671,107.315,96.845)
O2: (-3.238,101.762,92.221)
C4': (-0.083,105.579,93.379)
C2': (-1.617,104.720,91.823)
O2': (-0.713,104.469,90.766)
N1: (-2.644,103.416,93.700)
N3: (-4.682,102.194,93.912)
N4: (-6.124,102.684,95.617)
C6: (-2.942,104.127,94.833)
C5: (-4.075,103.910,95.506)
O3': (-0.938,107.030,91.618)
Image (generated by PyMOL):