ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEX:01234:01240

Extra

PDB:
ATOM 1 O3' A A1233 5.056 80.903 68.586 1.00 49.09 O
ATOM 2 P C A1234 5.381 81.054 67.024 1.00 50.36 P
ATOM 3 OP1 C A1234 4.768 79.899 66.332 1.00 50.64 O
ATOM 4 OP2 C A1234 6.837 81.309 66.868 1.00 51.56 O
ATOM 5 O5' C A1234 4.584 82.370 66.614 1.00 49.96 O
ATOM 6 C5' C A1234 3.155 82.397 66.684 1.00 49.80 C
ATOM 7 C4' C A1234 2.625 83.764 66.327 1.00 50.63 C
ATOM 8 O4' C A1234 2.952 84.716 67.365 1.00 50.45 O
ATOM 9 C3' C A1234 3.172 84.402 65.068 1.00 50.58 C
ATOM 10 O3' C A1234 2.552 83.896 63.905 1.00 52.57 O
ATOM 11 C2' C A1234 2.828 85.864 65.289 1.00 51.57 C
ATOM 12 O2' C A1234 1.475 86.141 64.992 1.00 50.95 O
ATOM 13 C1' C A1234 3.089 86.004 66.792 1.00 51.60 C
ATOM 14 N1 C A1234 4.443 86.503 67.082 1.00 52.40 N
ATOM 15 C2 C A1234 4.666 87.874 67.035 1.00 53.16 C
ATOM 16 O2 C A1234 3.710 88.625 66.791 1.00 54.37 O
ATOM 17 N3 C A1234 5.911 88.351 67.260 1.00 53.73 N
ATOM 18 C4 C A1234 6.908 87.510 67.536 1.00 53.12 C
ATOM 19 N4 C A1234 8.120 88.028 67.750 1.00 54.04 N
ATOM 20 C5 C A1234 6.707 86.102 67.606 1.00 52.30 C
ATOM 21 C6 C A1234 5.468 85.645 67.376 1.00 52.59 C
ATOM 22 P U A1235 3.436 83.620 62.599 1.00 55.31 P
ATOM 23 OP1 U A1235 2.537 83.150 61.514 1.00 55.13 O
ATOM 24 OP2 U A1235 4.578 82.768 63.026 1.00 54.78 O
ATOM 25 O5' U A1235 3.981 85.063 62.199 1.00 54.16 O
TER

ATOM 1 O3' A B1239 8.412 99.616 66.893 1.00 87.12 O
ATOM 2 P C B1240 7.697 99.499 68.332 1.00 86.21 P
ATOM 3 OP1 C B1240 7.364 100.873 68.778 1.00 86.11 O
ATOM 4 OP2 C B1240 8.502 98.619 69.216 1.00 86.25 O
ATOM 5 O5' C B1240 6.324 98.765 68.015 1.00 83.62 O
ATOM 6 C5' C B1240 5.496 98.279 69.074 1.00 79.32 C
ATOM 7 C4' C B1240 4.114 97.995 68.553 1.00 76.34 C
ATOM 8 O4' C B1240 4.185 97.073 67.437 1.00 75.42 O
ATOM 9 C3' C B1240 3.207 97.300 69.542 1.00 75.14 C
ATOM 10 O3' C B1240 2.631 98.242 70.421 1.00 73.68 O
ATOM 11 C2' C B1240 2.180 96.638 68.638 1.00 75.06 C
ATOM 12 O2' C B1240 1.189 97.543 68.196 1.00 75.44 O
ATOM 13 C1' C B1240 3.053 96.219 67.453 1.00 74.88 C
ATOM 14 N1 C B1240 3.527 94.829 67.529 1.00 74.14 N
ATOM 15 C2 C B1240 2.585 93.792 67.558 1.00 73.93 C
ATOM 16 O2 C B1240 1.375 94.074 67.533 1.00 73.97 O
ATOM 17 N3 C B1240 3.018 92.510 67.615 1.00 73.38 N
ATOM 18 C4 C B1240 4.327 92.249 67.651 1.00 72.90 C
ATOM 19 N4 C B1240 4.709 90.974 67.712 1.00 71.82 N
ATOM 20 C5 C B1240 5.305 93.286 67.627 1.00 72.55 C
ATOM 21 C6 C B1240 4.865 94.548 67.567 1.00 72.81 C
ATOM 22 P U B1241 2.641 97.952 71.989 1.00 73.35 P
ATOM 23 OP1 U B1241 1.782 98.976 72.621 1.00 74.85 O
ATOM 24 OP2 U B1241 4.055 97.811 72.418 1.00 72.27 O
ATOM 25 O5' U B1241 1.911 96.541 72.109 1.00 72.50 O
TER

Atoms:
C2: (4.666,87.874,67.035)
OP1: (4.768,79.899,66.332)
OP2: (6.837,81.309,66.868)
C4: (6.908,87.510,67.536)
O5': (4.584,82.370,66.614)
C3': (3.172,84.402,65.068)
C1': (3.089,86.004,66.792)
O4': (2.952,84.716,67.365)
C5': (3.155,82.397,66.684)
P: (5.381,81.054,67.024)
O2: (3.710,88.625,66.791)
C4': (2.625,83.764,66.327)
C2': (2.828,85.864,65.289)
O2': (1.475,86.141,64.992)
N1: (4.443,86.503,67.082)
N3: (5.911,88.351,67.260)
N4: (8.120,88.028,67.750)
C6: (5.468,85.645,67.376)
C5: (6.707,86.102,67.606)
O3': (2.552,83.896,63.905)
C2: (2.585,93.792,67.558)
OP1: (7.364,100.873,68.778)
OP2: (8.502,98.619,69.216)
C4: (4.327,92.249,67.651)
O5': (6.324,98.765,68.015)
C3': (3.207,97.300,69.542)
C1': (3.053,96.219,67.453)
O4': (4.185,97.073,67.437)
C5': (5.496,98.279,69.074)
P: (7.697,99.499,68.332)
O2: (1.375,94.074,67.533)
C4': (4.114,97.995,68.553)
C2': (2.180,96.638,68.638)
O2': (1.189,97.543,68.196)
N1: (3.527,94.829,67.529)
N3: (3.018,92.510,67.615)
N4: (4.709,90.974,67.712)
C6: (4.865,94.548,67.567)
C5: (5.305,93.286,67.627)
O3': (2.631,98.242,70.421)
Image (generated by PyMOL):
PyMOL image
show in jmol