Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.768 79.221 67.760 1.00 53.76 O
ATOM 2 P C A1234 5.089 79.351 66.194 1.00 55.45 P
ATOM 3 OP1 C A1234 4.472 78.171 65.520 1.00 56.63 O
ATOM 4 OP2 C A1234 6.541 79.603 66.038 1.00 53.57 O
ATOM 5 O5' C A1234 4.283 80.653 65.761 1.00 51.62 O
ATOM 6 C5' C A1234 2.853 80.659 65.793 1.00 51.66 C
ATOM 7 C4' C A1234 2.314 82.034 65.482 1.00 52.23 C
ATOM 8 O4' C A1234 2.664 82.954 66.547 1.00 54.36 O
ATOM 9 C3' C A1234 2.847 82.717 64.240 1.00 52.22 C
ATOM 10 O3' C A1234 2.245 82.233 63.054 1.00 52.69 O
ATOM 11 C2' C A1234 2.490 84.169 64.515 1.00 54.18 C
ATOM 12 O2' C A1234 1.129 84.462 64.286 1.00 55.86 O
ATOM 13 C1' C A1234 2.782 84.265 66.015 1.00 54.76 C
ATOM 14 N1 C A1234 4.147 84.768 66.261 1.00 55.46 N
ATOM 15 C2 C A1234 4.370 86.150 66.212 1.00 56.35 C
ATOM 16 O2 C A1234 3.403 86.913 66.028 1.00 57.07 O
ATOM 17 N3 C A1234 5.628 86.620 66.367 1.00 56.14 N
ATOM 18 C4 C A1234 6.633 85.774 66.576 1.00 55.30 C
ATOM 19 N4 C A1234 7.856 86.283 66.709 1.00 56.93 N
ATOM 20 C5 C A1234 6.432 84.367 66.659 1.00 55.66 C
ATOM 21 C6 C A1234 5.186 83.912 66.503 1.00 54.41 C
ATOM 22 P U A1235 3.148 82.010 61.747 1.00 54.97 P
ATOM 23 OP1 U A1235 2.274 81.594 60.619 1.00 57.16 O
ATOM 24 OP2 U A1235 4.284 81.144 62.144 1.00 53.36 O
ATOM 25 O5' U A1235 3.680 83.472 61.411 1.00 56.25 O
TER
ATOM 1 O3' A B1239 7.893 97.874 65.805 1.00 93.57 O
ATOM 2 P C B1240 7.263 97.710 67.277 1.00 92.47 P
ATOM 3 OP1 C B1240 7.309 99.034 67.948 1.00 92.27 O
ATOM 4 OP2 C B1240 7.883 96.530 67.935 1.00 92.63 O
ATOM 5 O5' C B1240 5.734 97.369 67.003 1.00 90.69 O
ATOM 6 C5' C B1240 4.931 96.776 68.028 1.00 86.84 C
ATOM 7 C4' C B1240 3.571 96.419 67.491 1.00 83.73 C
ATOM 8 O4' C B1240 3.695 95.514 66.363 1.00 82.89 O
ATOM 9 C3' C B1240 2.729 95.650 68.485 1.00 82.53 C
ATOM 10 O3' C B1240 2.108 96.535 69.396 1.00 80.95 O
ATOM 11 C2' C B1240 1.748 94.913 67.588 1.00 82.08 C
ATOM 12 O2' C B1240 0.687 95.734 67.140 1.00 82.37 O
ATOM 13 C1' C B1240 2.652 94.548 66.407 1.00 81.53 C
ATOM 14 N1 C B1240 3.259 93.204 66.518 1.00 79.77 N
ATOM 15 C2 C B1240 2.429 92.070 66.433 1.00 78.98 C
ATOM 16 O2 C B1240 1.201 92.225 66.292 1.00 79.73 O
ATOM 17 N3 C B1240 2.986 90.839 66.511 1.00 77.43 N
ATOM 18 C4 C B1240 4.305 90.712 66.674 1.00 76.59 C
ATOM 19 N4 C B1240 4.811 89.479 66.744 1.00 75.30 N
ATOM 20 C5 C B1240 5.165 91.842 66.774 1.00 77.06 C
ATOM 21 C6 C B1240 4.607 93.055 66.693 1.00 78.08 C
ATOM 22 P U B1241 2.130 96.196 70.957 1.00 79.23 P
ATOM 23 OP1 U B1241 1.286 97.219 71.621 1.00 80.15 O
ATOM 24 OP2 U B1241 3.540 96.007 71.387 1.00 77.92 O
ATOM 25 O5' U B1241 1.379 94.796 71.039 1.00 78.47 O
TER
ATOM 2 P C A1234 5.089 79.351 66.194 1.00 55.45 P
ATOM 3 OP1 C A1234 4.472 78.171 65.520 1.00 56.63 O
ATOM 4 OP2 C A1234 6.541 79.603 66.038 1.00 53.57 O
ATOM 5 O5' C A1234 4.283 80.653 65.761 1.00 51.62 O
ATOM 6 C5' C A1234 2.853 80.659 65.793 1.00 51.66 C
ATOM 7 C4' C A1234 2.314 82.034 65.482 1.00 52.23 C
ATOM 8 O4' C A1234 2.664 82.954 66.547 1.00 54.36 O
ATOM 9 C3' C A1234 2.847 82.717 64.240 1.00 52.22 C
ATOM 10 O3' C A1234 2.245 82.233 63.054 1.00 52.69 O
ATOM 11 C2' C A1234 2.490 84.169 64.515 1.00 54.18 C
ATOM 12 O2' C A1234 1.129 84.462 64.286 1.00 55.86 O
ATOM 13 C1' C A1234 2.782 84.265 66.015 1.00 54.76 C
ATOM 14 N1 C A1234 4.147 84.768 66.261 1.00 55.46 N
ATOM 15 C2 C A1234 4.370 86.150 66.212 1.00 56.35 C
ATOM 16 O2 C A1234 3.403 86.913 66.028 1.00 57.07 O
ATOM 17 N3 C A1234 5.628 86.620 66.367 1.00 56.14 N
ATOM 18 C4 C A1234 6.633 85.774 66.576 1.00 55.30 C
ATOM 19 N4 C A1234 7.856 86.283 66.709 1.00 56.93 N
ATOM 20 C5 C A1234 6.432 84.367 66.659 1.00 55.66 C
ATOM 21 C6 C A1234 5.186 83.912 66.503 1.00 54.41 C
ATOM 22 P U A1235 3.148 82.010 61.747 1.00 54.97 P
ATOM 23 OP1 U A1235 2.274 81.594 60.619 1.00 57.16 O
ATOM 24 OP2 U A1235 4.284 81.144 62.144 1.00 53.36 O
ATOM 25 O5' U A1235 3.680 83.472 61.411 1.00 56.25 O
TER
ATOM 1 O3' A B1239 7.893 97.874 65.805 1.00 93.57 O
ATOM 2 P C B1240 7.263 97.710 67.277 1.00 92.47 P
ATOM 3 OP1 C B1240 7.309 99.034 67.948 1.00 92.27 O
ATOM 4 OP2 C B1240 7.883 96.530 67.935 1.00 92.63 O
ATOM 5 O5' C B1240 5.734 97.369 67.003 1.00 90.69 O
ATOM 6 C5' C B1240 4.931 96.776 68.028 1.00 86.84 C
ATOM 7 C4' C B1240 3.571 96.419 67.491 1.00 83.73 C
ATOM 8 O4' C B1240 3.695 95.514 66.363 1.00 82.89 O
ATOM 9 C3' C B1240 2.729 95.650 68.485 1.00 82.53 C
ATOM 10 O3' C B1240 2.108 96.535 69.396 1.00 80.95 O
ATOM 11 C2' C B1240 1.748 94.913 67.588 1.00 82.08 C
ATOM 12 O2' C B1240 0.687 95.734 67.140 1.00 82.37 O
ATOM 13 C1' C B1240 2.652 94.548 66.407 1.00 81.53 C
ATOM 14 N1 C B1240 3.259 93.204 66.518 1.00 79.77 N
ATOM 15 C2 C B1240 2.429 92.070 66.433 1.00 78.98 C
ATOM 16 O2 C B1240 1.201 92.225 66.292 1.00 79.73 O
ATOM 17 N3 C B1240 2.986 90.839 66.511 1.00 77.43 N
ATOM 18 C4 C B1240 4.305 90.712 66.674 1.00 76.59 C
ATOM 19 N4 C B1240 4.811 89.479 66.744 1.00 75.30 N
ATOM 20 C5 C B1240 5.165 91.842 66.774 1.00 77.06 C
ATOM 21 C6 C B1240 4.607 93.055 66.693 1.00 78.08 C
ATOM 22 P U B1241 2.130 96.196 70.957 1.00 79.23 P
ATOM 23 OP1 U B1241 1.286 97.219 71.621 1.00 80.15 O
ATOM 24 OP2 U B1241 3.540 96.007 71.387 1.00 77.92 O
ATOM 25 O5' U B1241 1.379 94.796 71.039 1.00 78.47 O
TER
Atoms:
C2: (4.370,86.150,66.212)
OP1: (4.472,78.171,65.520)
OP2: (6.541,79.603,66.038)
C4: (6.633,85.774,66.576)
O5': (4.283,80.653,65.761)
C3': (2.847,82.717,64.240)
C1': (2.782,84.265,66.015)
O4': (2.664,82.954,66.547)
C5': (2.853,80.659,65.793)
P: (5.089,79.351,66.194)
O2: (3.403,86.913,66.028)
C4': (2.314,82.034,65.482)
C2': (2.490,84.169,64.515)
O2': (1.129,84.462,64.286)
N1: (4.147,84.768,66.261)
N3: (5.628,86.620,66.367)
N4: (7.856,86.283,66.709)
C6: (5.186,83.912,66.503)
C5: (6.432,84.367,66.659)
O3': (2.245,82.233,63.054)
OP1: (4.472,78.171,65.520)
OP2: (6.541,79.603,66.038)
C4: (6.633,85.774,66.576)
O5': (4.283,80.653,65.761)
C3': (2.847,82.717,64.240)
C1': (2.782,84.265,66.015)
O4': (2.664,82.954,66.547)
C5': (2.853,80.659,65.793)
P: (5.089,79.351,66.194)
O2: (3.403,86.913,66.028)
C4': (2.314,82.034,65.482)
C2': (2.490,84.169,64.515)
O2': (1.129,84.462,64.286)
N1: (4.147,84.768,66.261)
N3: (5.628,86.620,66.367)
N4: (7.856,86.283,66.709)
C6: (5.186,83.912,66.503)
C5: (6.432,84.367,66.659)
O3': (2.245,82.233,63.054)
C2: (2.429,92.070,66.433)
OP1: (7.309,99.034,67.948)
OP2: (7.883,96.530,67.935)
C4: (4.305,90.712,66.674)
O5': (5.734,97.369,67.003)
C3': (2.729,95.650,68.485)
C1': (2.652,94.548,66.407)
O4': (3.695,95.514,66.363)
C5': (4.931,96.776,68.028)
P: (7.263,97.710,67.277)
O2: (1.201,92.225,66.292)
C4': (3.571,96.419,67.491)
C2': (1.748,94.913,67.588)
O2': (0.687,95.734,67.140)
N1: (3.259,93.204,66.518)
N3: (2.986,90.839,66.511)
N4: (4.811,89.479,66.744)
C6: (4.607,93.055,66.693)
C5: (5.165,91.842,66.774)
O3': (2.108,96.535,69.396)
OP1: (7.309,99.034,67.948)
OP2: (7.883,96.530,67.935)
C4: (4.305,90.712,66.674)
O5': (5.734,97.369,67.003)
C3': (2.729,95.650,68.485)
C1': (2.652,94.548,66.407)
O4': (3.695,95.514,66.363)
C5': (4.931,96.776,68.028)
P: (7.263,97.710,67.277)
O2: (1.201,92.225,66.292)
C4': (3.571,96.419,67.491)
C2': (1.748,94.913,67.588)
O2': (0.687,95.734,67.140)
N1: (3.259,93.204,66.518)
N3: (2.986,90.839,66.511)
N4: (4.811,89.479,66.744)
C6: (4.607,93.055,66.693)
C5: (5.165,91.842,66.774)
O3': (2.108,96.535,69.396)
Image (generated by PyMOL):