Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01540:01571
Extra
PDB:
ATOM 1 O3' A A1539 122.585 179.410 69.671 1.00 61.81 O
ATOM 2 P C A1540 124.097 179.175 69.182 1.00 62.84 P
ATOM 3 OP1 C A1540 124.789 178.398 70.246 1.00 62.13 O
ATOM 4 OP2 C A1540 124.637 180.499 68.760 1.00 62.07 O
ATOM 5 O5' C A1540 123.957 178.263 67.881 1.00 60.46 O
ATOM 6 C5' C A1540 123.344 176.967 67.958 1.00 61.55 C
ATOM 7 C4' C A1540 123.128 176.397 66.578 1.00 62.70 C
ATOM 8 O4' C A1540 122.212 177.231 65.817 1.00 63.69 O
ATOM 9 C3' C A1540 124.351 176.346 65.688 1.00 63.96 C
ATOM 10 O3' C A1540 125.217 175.275 66.026 1.00 66.00 O
ATOM 11 C2' C A1540 123.730 176.195 64.306 1.00 63.39 C
ATOM 12 O2' C A1540 123.303 174.882 64.021 1.00 63.85 O
ATOM 13 C1' C A1540 122.508 177.107 64.429 1.00 63.97 C
ATOM 14 N1 C A1540 122.741 178.445 63.845 1.00 64.91 N
ATOM 15 C2 C A1540 122.582 178.611 62.453 1.00 66.15 C
ATOM 16 O2 C A1540 122.216 177.640 61.763 1.00 66.95 O
ATOM 17 N3 C A1540 122.828 179.822 61.899 1.00 65.83 N
ATOM 18 C4 C A1540 123.212 180.842 62.670 1.00 65.39 C
ATOM 19 N4 C A1540 123.463 182.015 62.076 1.00 65.13 N
ATOM 20 C5 C A1540 123.362 180.707 64.084 1.00 64.96 C
ATOM 21 C6 C A1540 123.119 179.505 64.623 1.00 64.18 C
ATOM 22 P U A1541 126.806 175.473 65.890 1.00 67.05 P
ATOM 23 OP1 U A1541 127.461 174.257 66.430 1.00 67.60 O
ATOM 24 OP2 U A1541 127.155 176.809 66.454 1.00 64.75 O
ATOM 25 O5' U A1541 127.045 175.510 64.317 1.00 65.70 O
TER
ATOM 1 O3' A B1570 125.764 187.118 53.125 1.00 74.00 O
ATOM 2 P C B1571 124.182 187.295 53.348 1.00 72.79 P
ATOM 3 OP1 C B1571 123.559 187.577 52.029 1.00 71.30 O
ATOM 4 OP2 C B1571 123.984 188.251 54.476 1.00 70.59 O
ATOM 5 O5' C B1571 123.707 185.850 53.829 1.00 71.45 O
ATOM 6 C5' C B1571 123.848 184.700 52.969 1.00 68.64 C
ATOM 7 C4' C B1571 123.473 183.430 53.706 1.00 67.64 C
ATOM 8 O4' C B1571 124.427 183.174 54.773 1.00 67.24 O
ATOM 9 C3' C B1571 122.132 183.412 54.425 1.00 66.57 C
ATOM 10 O3' C B1571 121.027 183.192 53.556 1.00 65.98 O
ATOM 11 C2' C B1571 122.328 182.264 55.402 1.00 66.15 C
ATOM 12 O2' C B1571 122.231 181.001 54.778 1.00 66.13 O
ATOM 13 C1' C B1571 123.775 182.496 55.838 1.00 66.20 C
ATOM 14 N1 C B1571 123.852 183.319 57.062 1.00 65.14 N
ATOM 15 C2 C B1571 123.892 182.671 58.302 1.00 65.55 C
ATOM 16 O2 C B1571 123.896 181.430 58.332 1.00 66.48 O
ATOM 17 N3 C B1571 123.923 183.410 59.436 1.00 65.45 N
ATOM 18 C4 C B1571 123.916 184.743 59.364 1.00 65.00 C
ATOM 19 N4 C B1571 123.929 185.431 60.509 1.00 63.52 N
ATOM 20 C5 C B1571 123.892 185.430 58.115 1.00 64.34 C
ATOM 21 C6 C B1571 123.865 184.686 57.000 1.00 64.91 C
ATOM 22 P G B1572 119.708 184.100 53.707 1.00 67.50 P
ATOM 23 OP1 G B1572 118.765 183.730 52.621 1.00 66.77 O
ATOM 24 OP2 G B1572 120.151 185.515 53.850 1.00 65.99 O
ATOM 25 O5' G B1572 119.070 183.660 55.104 1.00 68.22 O
TER
ATOM 2 P C A1540 124.097 179.175 69.182 1.00 62.84 P
ATOM 3 OP1 C A1540 124.789 178.398 70.246 1.00 62.13 O
ATOM 4 OP2 C A1540 124.637 180.499 68.760 1.00 62.07 O
ATOM 5 O5' C A1540 123.957 178.263 67.881 1.00 60.46 O
ATOM 6 C5' C A1540 123.344 176.967 67.958 1.00 61.55 C
ATOM 7 C4' C A1540 123.128 176.397 66.578 1.00 62.70 C
ATOM 8 O4' C A1540 122.212 177.231 65.817 1.00 63.69 O
ATOM 9 C3' C A1540 124.351 176.346 65.688 1.00 63.96 C
ATOM 10 O3' C A1540 125.217 175.275 66.026 1.00 66.00 O
ATOM 11 C2' C A1540 123.730 176.195 64.306 1.00 63.39 C
ATOM 12 O2' C A1540 123.303 174.882 64.021 1.00 63.85 O
ATOM 13 C1' C A1540 122.508 177.107 64.429 1.00 63.97 C
ATOM 14 N1 C A1540 122.741 178.445 63.845 1.00 64.91 N
ATOM 15 C2 C A1540 122.582 178.611 62.453 1.00 66.15 C
ATOM 16 O2 C A1540 122.216 177.640 61.763 1.00 66.95 O
ATOM 17 N3 C A1540 122.828 179.822 61.899 1.00 65.83 N
ATOM 18 C4 C A1540 123.212 180.842 62.670 1.00 65.39 C
ATOM 19 N4 C A1540 123.463 182.015 62.076 1.00 65.13 N
ATOM 20 C5 C A1540 123.362 180.707 64.084 1.00 64.96 C
ATOM 21 C6 C A1540 123.119 179.505 64.623 1.00 64.18 C
ATOM 22 P U A1541 126.806 175.473 65.890 1.00 67.05 P
ATOM 23 OP1 U A1541 127.461 174.257 66.430 1.00 67.60 O
ATOM 24 OP2 U A1541 127.155 176.809 66.454 1.00 64.75 O
ATOM 25 O5' U A1541 127.045 175.510 64.317 1.00 65.70 O
TER
ATOM 1 O3' A B1570 125.764 187.118 53.125 1.00 74.00 O
ATOM 2 P C B1571 124.182 187.295 53.348 1.00 72.79 P
ATOM 3 OP1 C B1571 123.559 187.577 52.029 1.00 71.30 O
ATOM 4 OP2 C B1571 123.984 188.251 54.476 1.00 70.59 O
ATOM 5 O5' C B1571 123.707 185.850 53.829 1.00 71.45 O
ATOM 6 C5' C B1571 123.848 184.700 52.969 1.00 68.64 C
ATOM 7 C4' C B1571 123.473 183.430 53.706 1.00 67.64 C
ATOM 8 O4' C B1571 124.427 183.174 54.773 1.00 67.24 O
ATOM 9 C3' C B1571 122.132 183.412 54.425 1.00 66.57 C
ATOM 10 O3' C B1571 121.027 183.192 53.556 1.00 65.98 O
ATOM 11 C2' C B1571 122.328 182.264 55.402 1.00 66.15 C
ATOM 12 O2' C B1571 122.231 181.001 54.778 1.00 66.13 O
ATOM 13 C1' C B1571 123.775 182.496 55.838 1.00 66.20 C
ATOM 14 N1 C B1571 123.852 183.319 57.062 1.00 65.14 N
ATOM 15 C2 C B1571 123.892 182.671 58.302 1.00 65.55 C
ATOM 16 O2 C B1571 123.896 181.430 58.332 1.00 66.48 O
ATOM 17 N3 C B1571 123.923 183.410 59.436 1.00 65.45 N
ATOM 18 C4 C B1571 123.916 184.743 59.364 1.00 65.00 C
ATOM 19 N4 C B1571 123.929 185.431 60.509 1.00 63.52 N
ATOM 20 C5 C B1571 123.892 185.430 58.115 1.00 64.34 C
ATOM 21 C6 C B1571 123.865 184.686 57.000 1.00 64.91 C
ATOM 22 P G B1572 119.708 184.100 53.707 1.00 67.50 P
ATOM 23 OP1 G B1572 118.765 183.730 52.621 1.00 66.77 O
ATOM 24 OP2 G B1572 120.151 185.515 53.850 1.00 65.99 O
ATOM 25 O5' G B1572 119.070 183.660 55.104 1.00 68.22 O
TER
Atoms:
C2: (122.582,178.611,62.453)
OP1: (124.789,178.398,70.246)
OP2: (124.637,180.499,68.760)
C4: (123.212,180.842,62.670)
O5': (123.957,178.263,67.881)
C3': (124.351,176.346,65.688)
C1': (122.508,177.107,64.429)
O4': (122.212,177.231,65.817)
C5': (123.344,176.967,67.958)
P: (124.097,179.175,69.182)
O2: (122.216,177.640,61.763)
C4': (123.128,176.397,66.578)
C2': (123.730,176.195,64.306)
O2': (123.303,174.882,64.021)
N1: (122.741,178.445,63.845)
N3: (122.828,179.822,61.899)
N4: (123.463,182.015,62.076)
C6: (123.119,179.505,64.623)
C5: (123.362,180.707,64.084)
O3': (125.217,175.275,66.026)
OP1: (124.789,178.398,70.246)
OP2: (124.637,180.499,68.760)
C4: (123.212,180.842,62.670)
O5': (123.957,178.263,67.881)
C3': (124.351,176.346,65.688)
C1': (122.508,177.107,64.429)
O4': (122.212,177.231,65.817)
C5': (123.344,176.967,67.958)
P: (124.097,179.175,69.182)
O2: (122.216,177.640,61.763)
C4': (123.128,176.397,66.578)
C2': (123.730,176.195,64.306)
O2': (123.303,174.882,64.021)
N1: (122.741,178.445,63.845)
N3: (122.828,179.822,61.899)
N4: (123.463,182.015,62.076)
C6: (123.119,179.505,64.623)
C5: (123.362,180.707,64.084)
O3': (125.217,175.275,66.026)
C2: (123.892,182.671,58.302)
OP1: (123.559,187.577,52.029)
OP2: (123.984,188.251,54.476)
C4: (123.916,184.743,59.364)
O5': (123.707,185.850,53.829)
C3': (122.132,183.412,54.425)
C1': (123.775,182.496,55.838)
O4': (124.427,183.174,54.773)
C5': (123.848,184.700,52.969)
P: (124.182,187.295,53.348)
O2: (123.896,181.430,58.332)
C4': (123.473,183.430,53.706)
C2': (122.328,182.264,55.402)
O2': (122.231,181.001,54.778)
N1: (123.852,183.319,57.062)
N3: (123.923,183.410,59.436)
N4: (123.929,185.431,60.509)
C6: (123.865,184.686,57.000)
C5: (123.892,185.430,58.115)
O3': (121.027,183.192,53.556)
OP1: (123.559,187.577,52.029)
OP2: (123.984,188.251,54.476)
C4: (123.916,184.743,59.364)
O5': (123.707,185.850,53.829)
C3': (122.132,183.412,54.425)
C1': (123.775,182.496,55.838)
O4': (124.427,183.174,54.773)
C5': (123.848,184.700,52.969)
P: (124.182,187.295,53.348)
O2: (123.896,181.430,58.332)
C4': (123.473,183.430,53.706)
C2': (122.328,182.264,55.402)
O2': (122.231,181.001,54.778)
N1: (123.852,183.319,57.062)
N3: (123.923,183.410,59.436)
N4: (123.929,185.431,60.509)
C6: (123.865,184.686,57.000)
C5: (123.892,185.430,58.115)
O3': (121.027,183.192,53.556)
Image (generated by PyMOL):