ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1903:A1914

Extra

PDB:
ATOM 1 O3' G A1902 105.716 110.189 90.124 1.00 51.86 O
ATOM 2 P G A1903 106.000 110.456 91.688 1.00 53.19 P
ATOM 3 OP1 G A1903 104.706 110.208 92.388 1.00 51.51 O
ATOM 4 OP2 G A1903 106.701 111.749 91.885 1.00 51.88 O
ATOM 5 O5' G A1903 107.017 109.295 92.085 1.00 53.60 O
ATOM 6 C5' G A1903 106.665 107.917 91.829 1.00 56.07 C
ATOM 7 C4' G A1903 107.770 106.978 92.248 1.00 57.03 C
ATOM 8 O4' G A1903 108.840 106.993 91.275 1.00 56.53 O
ATOM 9 C3' G A1903 108.448 107.256 93.574 1.00 57.33 C
ATOM 10 O3' G A1903 107.706 106.746 94.665 1.00 58.52 O
ATOM 11 C2' G A1903 109.765 106.526 93.400 1.00 58.36 C
ATOM 12 O2' G A1903 109.633 105.129 93.561 1.00 59.83 O
ATOM 13 C1' G A1903 110.077 106.850 91.941 1.00 58.58 C
ATOM 14 N9 G A1903 110.770 108.126 91.855 1.00 60.26 N
ATOM 15 C8 G A1903 110.237 109.342 91.504 1.00 61.10 C
ATOM 16 N7 G A1903 111.114 110.306 91.516 1.00 61.48 N
ATOM 17 C5 G A1903 112.296 109.688 91.900 1.00 61.38 C
ATOM 18 C6 G A1903 113.593 110.221 92.076 1.00 61.88 C
ATOM 19 O6 G A1903 113.981 111.380 91.898 1.00 62.36 O
ATOM 20 N1 G A1903 114.493 109.248 92.489 1.00 61.62 N
ATOM 21 C2 G A1903 114.188 107.931 92.688 1.00 61.91 C
ATOM 22 N2 G A1903 115.185 107.149 93.101 1.00 62.88 N
ATOM 23 N3 G A1903 112.990 107.416 92.503 1.00 61.59 N
ATOM 24 C4 G A1903 112.097 108.346 92.117 1.00 61.00 C
ATOM 25 P C A1904 107.726 107.525 96.066 1.00 60.35 P
ATOM 26 OP1 C A1904 106.757 106.925 97.013 1.00 60.05 O
ATOM 27 OP2 C A1904 107.655 108.980 95.765 1.00 62.05 O
ATOM 28 O5' C A1904 109.178 107.214 96.621 1.00 62.65 O
TER

ATOM 1 O3' U B1913 112.565 96.056 89.709 1.00 91.10 O
ATOM 2 P A B1914 114.101 95.586 89.640 1.00 87.12 P
ATOM 3 OP1 A B1914 114.237 95.067 88.261 1.00 88.44 O
ATOM 4 OP2 A B1914 114.504 94.737 90.800 1.00 87.10 O
ATOM 5 O5' A B1914 114.905 96.946 89.730 1.00 83.64 O
ATOM 6 C5' A B1914 116.109 97.124 88.998 1.00 78.94 C
ATOM 7 C4' A B1914 116.612 98.527 89.189 1.00 75.32 C
ATOM 8 O4' A B1914 115.715 99.454 88.533 1.00 74.67 O
ATOM 9 C3' A B1914 116.711 99.002 90.629 1.00 72.57 C
ATOM 10 O3' A B1914 117.973 98.637 91.183 1.00 72.89 O
ATOM 11 C2' A B1914 116.582 100.510 90.479 1.00 71.09 C
ATOM 12 O2' A B1914 117.821 101.106 90.156 1.00 68.78 O
ATOM 13 C1' A B1914 115.621 100.638 89.293 1.00 72.24 C
ATOM 14 N9 A B1914 114.222 100.811 89.684 1.00 72.01 N
ATOM 15 C8 A B1914 113.259 99.836 89.821 1.00 72.71 C
ATOM 16 N7 A B1914 112.087 100.297 90.178 1.00 71.77 N
ATOM 17 C5 A B1914 112.292 101.667 90.280 1.00 71.84 C
ATOM 18 C6 A B1914 111.441 102.716 90.614 1.00 72.28 C
ATOM 19 N6 A B1914 110.146 102.553 90.885 1.00 73.83 N
ATOM 20 N1 A B1914 111.961 103.960 90.653 1.00 71.27 N
ATOM 21 C2 A B1914 113.250 104.124 90.351 1.00 70.46 C
ATOM 22 N3 A B1914 114.149 103.218 90.003 1.00 70.81 N
ATOM 23 C4 A B1914 113.602 101.994 89.989 1.00 71.39 C
ATOM 24 P A B1915 118.123 98.397 92.768 1.00 73.55 P
ATOM 25 OP1 A B1915 119.429 97.753 93.052 1.00 73.96 O
ATOM 26 OP2 A B1915 116.861 97.772 93.263 1.00 73.06 O
ATOM 27 O5' A B1915 118.247 99.853 93.378 1.00 70.50 O
TER

Atoms:
OP1: (104.706,110.208,92.388)
OP2: (106.701,111.749,91.885)
C3': (108.448,107.256,93.574)
C1': (110.077,106.850,91.941)
C5': (106.665,107.917,91.829)
O6: (113.981,111.380,91.898)
O4': (108.840,106.993,91.275)
C8: (110.237,109.342,91.504)
C2: (114.188,107.931,92.688)
C6: (113.593,110.221,92.076)
C5: (112.296,109.688,91.900)
C4: (112.097,108.346,92.117)
P: (106.000,110.456,91.688)
C4': (107.770,106.978,92.248)
C2': (109.765,106.526,93.400)
O2': (109.633,105.129,93.561)
N1: (114.493,109.248,92.489)
N2: (115.185,107.149,93.101)
N3: (112.990,107.416,92.503)
N7: (111.114,110.306,91.516)
N9: (110.770,108.126,91.855)
O5': (107.017,109.295,92.085)
O3': (107.706,106.746,94.665)
OP1: (114.237,95.067,88.261)
OP2: (114.504,94.737,90.800)
C3': (116.711,99.002,90.629)
C1': (115.621,100.638,89.293)
C5': (116.109,97.124,88.998)
O4': (115.715,99.454,88.533)
C8: (113.259,99.836,89.821)
O2': (117.821,101.106,90.156)
C6: (111.441,102.716,90.614)
C5: (112.292,101.667,90.280)
C4: (113.602,101.994,89.989)
P: (114.101,95.586,89.640)
C4': (116.612,98.527,89.189)
C2': (116.582,100.510,90.479)
C2: (113.250,104.124,90.351)
N1: (111.961,103.960,90.653)
N3: (114.149,103.218,90.003)
N6: (110.146,102.553,90.885)
N7: (112.087,100.297,90.178)
N9: (114.222,100.811,89.684)
O5': (114.905,96.946,89.730)
O3': (117.973,98.637,91.183)
Image (generated by PyMOL):
PyMOL image
show in jmol