Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1888:A2113
Extra
PDB:
ATOM 1 O3' G A1887 117.104 94.081 54.540 1.00 86.54 O
ATOM 2 P A A1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 3 OP1 A A1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 4 OP2 A A1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 5 O5' A A1888 115.807 96.102 55.373 1.00 81.22 O
ATOM 6 C5' A A1888 116.264 97.134 54.459 1.00 76.37 C
ATOM 7 C4' A A1888 115.376 98.366 54.507 1.00 73.01 C
ATOM 8 O4' A A1888 114.143 98.126 53.793 1.00 71.77 O
ATOM 9 C3' A A1888 114.925 98.874 55.869 1.00 70.69 C
ATOM 10 O3' A A1888 115.934 99.618 56.535 1.00 68.39 O
ATOM 11 C2' A A1888 113.713 99.723 55.507 1.00 71.08 C
ATOM 12 O2' A A1888 114.015 101.002 54.976 1.00 71.21 O
ATOM 13 C1' A A1888 113.102 98.874 54.395 1.00 71.14 C
ATOM 14 N9 A A1888 112.118 97.931 54.902 1.00 69.95 N
ATOM 15 C8 A A1888 112.271 96.621 55.269 1.00 68.88 C
ATOM 16 N7 A A1888 111.153 96.045 55.626 1.00 69.19 N
ATOM 17 C5 A A1888 110.205 97.050 55.496 1.00 69.65 C
ATOM 18 C6 A A1888 108.819 97.077 55.704 1.00 69.74 C
ATOM 19 N6 A A1888 108.113 96.023 56.110 1.00 68.94 N
ATOM 20 N1 A A1888 108.174 98.243 55.477 1.00 70.64 N
ATOM 21 C2 A A1888 108.888 99.307 55.075 1.00 71.32 C
ATOM 22 N3 A A1888 110.190 99.400 54.846 1.00 71.12 N
ATOM 23 C4 A A1888 110.793 98.221 55.073 1.00 70.18 C
ATOM 24 P A A1889 116.021 99.566 58.137 1.00 67.14 P
ATOM 25 OP1 A A1889 117.275 100.229 58.594 1.00 66.86 O
ATOM 26 OP2 A A1889 115.739 98.169 58.555 1.00 65.42 O
ATOM 27 O5' A A1889 114.805 100.483 58.596 1.00 66.78 O
TER
ATOM 1 O3' A B2112 100.503 96.673 52.748 1.00 56.51 O
ATOM 2 P G B2113 99.835 96.943 54.187 1.00 57.51 P
ATOM 3 OP1 G B2113 98.950 95.810 54.531 1.00 54.73 O
ATOM 4 OP2 G B2113 99.270 98.308 54.087 1.00 58.94 O
ATOM 5 O5' G B2113 101.044 97.055 55.218 1.00 57.03 O
ATOM 6 C5' G B2113 101.859 95.934 55.569 1.00 56.31 C
ATOM 7 C4' G B2113 103.079 96.424 56.302 1.00 56.96 C
ATOM 8 O4' G B2113 103.772 97.357 55.426 1.00 57.52 O
ATOM 9 C3' G B2113 102.839 97.261 57.555 1.00 57.36 C
ATOM 10 O3' G B2113 102.530 96.490 58.718 1.00 57.40 O
ATOM 11 C2' G B2113 104.159 98.016 57.673 1.00 58.06 C
ATOM 12 O2' G B2113 105.212 97.176 58.093 1.00 58.61 O
ATOM 13 C1' G B2113 104.441 98.350 56.207 1.00 58.49 C
ATOM 14 N9 G B2113 104.007 99.688 55.786 1.00 58.97 N
ATOM 15 C8 G B2113 102.908 99.987 55.023 1.00 59.56 C
ATOM 16 N7 G B2113 102.772 101.265 54.795 1.00 60.53 N
ATOM 17 C5 G B2113 103.839 101.860 55.445 1.00 59.95 C
ATOM 18 C6 G B2113 104.200 103.232 55.536 1.00 60.94 C
ATOM 19 O6 G B2113 103.628 104.215 55.040 1.00 62.29 O
ATOM 20 N1 G B2113 105.351 103.411 56.291 1.00 61.20 N
ATOM 21 C2 G B2113 106.071 102.404 56.878 1.00 60.12 C
ATOM 22 N2 G B2113 107.149 102.801 57.570 1.00 60.21 N
ATOM 23 N3 G B2113 105.752 101.108 56.794 1.00 58.70 N
ATOM 24 C4 G B2113 104.622 100.912 56.067 1.00 58.98 C
ATOM 25 P C B2114 101.630 97.140 59.903 1.00 57.05 P
ATOM 26 OP1 C B2114 101.328 96.084 60.910 1.00 56.89 O
ATOM 27 OP2 C B2114 100.523 97.910 59.315 1.00 56.96 O
ATOM 28 O5' C B2114 102.600 98.186 60.612 1.00 56.74 O
TER
ATOM 2 P A A1888 116.819 94.959 55.863 1.00 83.89 P
ATOM 3 OP1 A A1888 118.122 95.589 56.207 1.00 84.80 O
ATOM 4 OP2 A A1888 116.144 94.110 56.861 1.00 83.36 O
ATOM 5 O5' A A1888 115.807 96.102 55.373 1.00 81.22 O
ATOM 6 C5' A A1888 116.264 97.134 54.459 1.00 76.37 C
ATOM 7 C4' A A1888 115.376 98.366 54.507 1.00 73.01 C
ATOM 8 O4' A A1888 114.143 98.126 53.793 1.00 71.77 O
ATOM 9 C3' A A1888 114.925 98.874 55.869 1.00 70.69 C
ATOM 10 O3' A A1888 115.934 99.618 56.535 1.00 68.39 O
ATOM 11 C2' A A1888 113.713 99.723 55.507 1.00 71.08 C
ATOM 12 O2' A A1888 114.015 101.002 54.976 1.00 71.21 O
ATOM 13 C1' A A1888 113.102 98.874 54.395 1.00 71.14 C
ATOM 14 N9 A A1888 112.118 97.931 54.902 1.00 69.95 N
ATOM 15 C8 A A1888 112.271 96.621 55.269 1.00 68.88 C
ATOM 16 N7 A A1888 111.153 96.045 55.626 1.00 69.19 N
ATOM 17 C5 A A1888 110.205 97.050 55.496 1.00 69.65 C
ATOM 18 C6 A A1888 108.819 97.077 55.704 1.00 69.74 C
ATOM 19 N6 A A1888 108.113 96.023 56.110 1.00 68.94 N
ATOM 20 N1 A A1888 108.174 98.243 55.477 1.00 70.64 N
ATOM 21 C2 A A1888 108.888 99.307 55.075 1.00 71.32 C
ATOM 22 N3 A A1888 110.190 99.400 54.846 1.00 71.12 N
ATOM 23 C4 A A1888 110.793 98.221 55.073 1.00 70.18 C
ATOM 24 P A A1889 116.021 99.566 58.137 1.00 67.14 P
ATOM 25 OP1 A A1889 117.275 100.229 58.594 1.00 66.86 O
ATOM 26 OP2 A A1889 115.739 98.169 58.555 1.00 65.42 O
ATOM 27 O5' A A1889 114.805 100.483 58.596 1.00 66.78 O
TER
ATOM 1 O3' A B2112 100.503 96.673 52.748 1.00 56.51 O
ATOM 2 P G B2113 99.835 96.943 54.187 1.00 57.51 P
ATOM 3 OP1 G B2113 98.950 95.810 54.531 1.00 54.73 O
ATOM 4 OP2 G B2113 99.270 98.308 54.087 1.00 58.94 O
ATOM 5 O5' G B2113 101.044 97.055 55.218 1.00 57.03 O
ATOM 6 C5' G B2113 101.859 95.934 55.569 1.00 56.31 C
ATOM 7 C4' G B2113 103.079 96.424 56.302 1.00 56.96 C
ATOM 8 O4' G B2113 103.772 97.357 55.426 1.00 57.52 O
ATOM 9 C3' G B2113 102.839 97.261 57.555 1.00 57.36 C
ATOM 10 O3' G B2113 102.530 96.490 58.718 1.00 57.40 O
ATOM 11 C2' G B2113 104.159 98.016 57.673 1.00 58.06 C
ATOM 12 O2' G B2113 105.212 97.176 58.093 1.00 58.61 O
ATOM 13 C1' G B2113 104.441 98.350 56.207 1.00 58.49 C
ATOM 14 N9 G B2113 104.007 99.688 55.786 1.00 58.97 N
ATOM 15 C8 G B2113 102.908 99.987 55.023 1.00 59.56 C
ATOM 16 N7 G B2113 102.772 101.265 54.795 1.00 60.53 N
ATOM 17 C5 G B2113 103.839 101.860 55.445 1.00 59.95 C
ATOM 18 C6 G B2113 104.200 103.232 55.536 1.00 60.94 C
ATOM 19 O6 G B2113 103.628 104.215 55.040 1.00 62.29 O
ATOM 20 N1 G B2113 105.351 103.411 56.291 1.00 61.20 N
ATOM 21 C2 G B2113 106.071 102.404 56.878 1.00 60.12 C
ATOM 22 N2 G B2113 107.149 102.801 57.570 1.00 60.21 N
ATOM 23 N3 G B2113 105.752 101.108 56.794 1.00 58.70 N
ATOM 24 C4 G B2113 104.622 100.912 56.067 1.00 58.98 C
ATOM 25 P C B2114 101.630 97.140 59.903 1.00 57.05 P
ATOM 26 OP1 C B2114 101.328 96.084 60.910 1.00 56.89 O
ATOM 27 OP2 C B2114 100.523 97.910 59.315 1.00 56.96 O
ATOM 28 O5' C B2114 102.600 98.186 60.612 1.00 56.74 O
TER
Atoms:
OP1: (118.122,95.589,56.207)
OP2: (116.144,94.110,56.861)
C3': (114.925,98.874,55.869)
C1': (113.102,98.874,54.395)
C5': (116.264,97.134,54.459)
O4': (114.143,98.126,53.793)
C8: (112.271,96.621,55.269)
O2': (114.015,101.002,54.976)
C6: (108.819,97.077,55.704)
C5: (110.205,97.050,55.496)
C4: (110.793,98.221,55.073)
P: (116.819,94.959,55.863)
C4': (115.376,98.366,54.507)
C2': (113.713,99.723,55.507)
C2: (108.888,99.307,55.075)
N1: (108.174,98.243,55.477)
N3: (110.190,99.400,54.846)
N6: (108.113,96.023,56.110)
N7: (111.153,96.045,55.626)
N9: (112.118,97.931,54.902)
O5': (115.807,96.102,55.373)
O3': (115.934,99.618,56.535)
OP2: (116.144,94.110,56.861)
C3': (114.925,98.874,55.869)
C1': (113.102,98.874,54.395)
C5': (116.264,97.134,54.459)
O4': (114.143,98.126,53.793)
C8: (112.271,96.621,55.269)
O2': (114.015,101.002,54.976)
C6: (108.819,97.077,55.704)
C5: (110.205,97.050,55.496)
C4: (110.793,98.221,55.073)
P: (116.819,94.959,55.863)
C4': (115.376,98.366,54.507)
C2': (113.713,99.723,55.507)
C2: (108.888,99.307,55.075)
N1: (108.174,98.243,55.477)
N3: (110.190,99.400,54.846)
N6: (108.113,96.023,56.110)
N7: (111.153,96.045,55.626)
N9: (112.118,97.931,54.902)
O5': (115.807,96.102,55.373)
O3': (115.934,99.618,56.535)
OP1: (98.950,95.810,54.531)
OP2: (99.270,98.308,54.087)
C3': (102.839,97.261,57.555)
C1': (104.441,98.350,56.207)
C5': (101.859,95.934,55.569)
O6: (103.628,104.215,55.040)
O4': (103.772,97.357,55.426)
C8: (102.908,99.987,55.023)
C2: (106.071,102.404,56.878)
C6: (104.200,103.232,55.536)
C5: (103.839,101.860,55.445)
C4: (104.622,100.912,56.067)
P: (99.835,96.943,54.187)
C4': (103.079,96.424,56.302)
C2': (104.159,98.016,57.673)
O2': (105.212,97.176,58.093)
N1: (105.351,103.411,56.291)
N2: (107.149,102.801,57.570)
N3: (105.752,101.108,56.794)
N7: (102.772,101.265,54.795)
N9: (104.007,99.688,55.786)
O5': (101.044,97.055,55.218)
O3': (102.530,96.490,58.718)
OP2: (99.270,98.308,54.087)
C3': (102.839,97.261,57.555)
C1': (104.441,98.350,56.207)
C5': (101.859,95.934,55.569)
O6: (103.628,104.215,55.040)
O4': (103.772,97.357,55.426)
C8: (102.908,99.987,55.023)
C2: (106.071,102.404,56.878)
C6: (104.200,103.232,55.536)
C5: (103.839,101.860,55.445)
C4: (104.622,100.912,56.067)
P: (99.835,96.943,54.187)
C4': (103.079,96.424,56.302)
C2': (104.159,98.016,57.673)
O2': (105.212,97.176,58.093)
N1: (105.351,103.411,56.291)
N2: (107.149,102.801,57.570)
N3: (105.752,101.108,56.794)
N7: (102.772,101.265,54.795)
N9: (104.007,99.688,55.786)
O5': (101.044,97.055,55.218)
O3': (102.530,96.490,58.718)
Image (generated by PyMOL):