Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2078:A2107
Extra
PDB:
ATOM 1 O3' G A2077 106.752 105.400 33.296 1.00 42.41 O
ATOM 2 P C A2078 108.159 105.805 32.639 1.00 42.31 P
ATOM 3 OP1 C A2078 108.002 105.668 31.165 1.00 41.61 O
ATOM 4 OP2 C A2078 109.224 105.043 33.341 1.00 40.11 O
ATOM 5 O5' C A2078 108.336 107.348 33.004 1.00 40.06 O
ATOM 6 C5' C A2078 107.499 108.352 32.394 1.00 38.82 C
ATOM 7 C4' C A2078 107.668 109.676 33.092 1.00 38.28 C
ATOM 8 O4' C A2078 107.360 109.552 34.503 1.00 38.38 O
ATOM 9 C3' C A2078 109.077 110.229 33.076 1.00 39.19 C
ATOM 10 O3' C A2078 109.266 110.865 31.822 1.00 41.47 O
ATOM 11 C2' C A2078 109.049 111.206 34.250 1.00 38.49 C
ATOM 12 O2' C A2078 108.382 112.412 33.939 1.00 39.46 O
ATOM 13 C1' C A2078 108.174 110.448 35.248 1.00 37.59 C
ATOM 14 N1 C A2078 108.921 109.680 36.253 1.00 37.48 N
ATOM 15 C2 C A2078 109.361 110.331 37.424 1.00 37.25 C
ATOM 16 O2 C A2078 109.103 111.535 37.579 1.00 36.85 O
ATOM 17 N3 C A2078 110.053 109.626 38.350 1.00 36.87 N
ATOM 18 C4 C A2078 110.312 108.331 38.140 1.00 36.43 C
ATOM 19 N4 C A2078 111.008 107.670 39.068 1.00 36.58 N
ATOM 20 C5 C A2078 109.870 107.650 36.964 1.00 36.74 C
ATOM 21 C6 C A2078 109.187 108.354 36.059 1.00 36.67 C
ATOM 22 P U A2079 110.717 110.913 31.140 1.00 44.42 P
ATOM 23 OP1 U A2079 111.434 112.046 31.766 1.00 44.54 O
ATOM 24 OP2 U A2079 110.542 110.879 29.664 1.00 41.90 O
ATOM 25 O5' U A2079 111.444 109.567 31.570 1.00 42.32 O
TER
ATOM 1 O3' A B2106 112.524 113.673 47.470 1.00 46.35 O
ATOM 2 P C B2107 110.958 113.316 47.571 1.00 49.12 P
ATOM 3 OP1 C B2107 110.558 113.538 48.983 1.00 48.14 O
ATOM 4 OP2 C B2107 110.721 111.996 46.933 1.00 47.71 O
ATOM 5 O5' C B2107 110.253 114.427 46.678 1.00 44.94 O
ATOM 6 C5' C B2107 110.334 115.815 47.042 1.00 39.80 C
ATOM 7 C4' C B2107 109.795 116.670 45.932 1.00 37.26 C
ATOM 8 O4' C B2107 110.584 116.441 44.742 1.00 37.58 O
ATOM 9 C3' C B2107 108.381 116.349 45.485 1.00 36.27 C
ATOM 10 O3' C B2107 107.415 116.927 46.342 1.00 35.13 O
ATOM 11 C2' C B2107 108.355 116.931 44.083 1.00 35.00 C
ATOM 12 O2' C B2107 108.245 118.337 44.103 1.00 34.44 O
ATOM 13 C1' C B2107 109.753 116.556 43.597 1.00 34.28 C
ATOM 14 N1 C B2107 109.786 115.281 42.865 1.00 31.31 N
ATOM 15 C2 C B2107 109.349 115.266 41.549 1.00 30.60 C
ATOM 16 O2 C B2107 108.891 116.307 41.067 1.00 32.25 O
ATOM 17 N3 C B2107 109.426 114.123 40.831 1.00 31.01 N
ATOM 18 C4 C B2107 109.909 113.016 41.396 1.00 32.17 C
ATOM 19 N4 C B2107 109.996 111.910 40.649 1.00 31.98 N
ATOM 20 C5 C B2107 110.332 112.992 42.757 1.00 31.91 C
ATOM 21 C6 C B2107 110.253 114.137 43.449 1.00 30.08 C
ATOM 22 P C B2108 106.191 116.036 46.867 1.00 34.98 P
ATOM 23 OP1 C B2108 105.414 116.905 47.780 1.00 34.64 O
ATOM 24 OP2 C B2108 106.681 114.715 47.338 1.00 34.77 O
ATOM 25 O5' C B2108 105.329 115.800 45.559 1.00 30.75 O
TER
ATOM 2 P C A2078 108.159 105.805 32.639 1.00 42.31 P
ATOM 3 OP1 C A2078 108.002 105.668 31.165 1.00 41.61 O
ATOM 4 OP2 C A2078 109.224 105.043 33.341 1.00 40.11 O
ATOM 5 O5' C A2078 108.336 107.348 33.004 1.00 40.06 O
ATOM 6 C5' C A2078 107.499 108.352 32.394 1.00 38.82 C
ATOM 7 C4' C A2078 107.668 109.676 33.092 1.00 38.28 C
ATOM 8 O4' C A2078 107.360 109.552 34.503 1.00 38.38 O
ATOM 9 C3' C A2078 109.077 110.229 33.076 1.00 39.19 C
ATOM 10 O3' C A2078 109.266 110.865 31.822 1.00 41.47 O
ATOM 11 C2' C A2078 109.049 111.206 34.250 1.00 38.49 C
ATOM 12 O2' C A2078 108.382 112.412 33.939 1.00 39.46 O
ATOM 13 C1' C A2078 108.174 110.448 35.248 1.00 37.59 C
ATOM 14 N1 C A2078 108.921 109.680 36.253 1.00 37.48 N
ATOM 15 C2 C A2078 109.361 110.331 37.424 1.00 37.25 C
ATOM 16 O2 C A2078 109.103 111.535 37.579 1.00 36.85 O
ATOM 17 N3 C A2078 110.053 109.626 38.350 1.00 36.87 N
ATOM 18 C4 C A2078 110.312 108.331 38.140 1.00 36.43 C
ATOM 19 N4 C A2078 111.008 107.670 39.068 1.00 36.58 N
ATOM 20 C5 C A2078 109.870 107.650 36.964 1.00 36.74 C
ATOM 21 C6 C A2078 109.187 108.354 36.059 1.00 36.67 C
ATOM 22 P U A2079 110.717 110.913 31.140 1.00 44.42 P
ATOM 23 OP1 U A2079 111.434 112.046 31.766 1.00 44.54 O
ATOM 24 OP2 U A2079 110.542 110.879 29.664 1.00 41.90 O
ATOM 25 O5' U A2079 111.444 109.567 31.570 1.00 42.32 O
TER
ATOM 1 O3' A B2106 112.524 113.673 47.470 1.00 46.35 O
ATOM 2 P C B2107 110.958 113.316 47.571 1.00 49.12 P
ATOM 3 OP1 C B2107 110.558 113.538 48.983 1.00 48.14 O
ATOM 4 OP2 C B2107 110.721 111.996 46.933 1.00 47.71 O
ATOM 5 O5' C B2107 110.253 114.427 46.678 1.00 44.94 O
ATOM 6 C5' C B2107 110.334 115.815 47.042 1.00 39.80 C
ATOM 7 C4' C B2107 109.795 116.670 45.932 1.00 37.26 C
ATOM 8 O4' C B2107 110.584 116.441 44.742 1.00 37.58 O
ATOM 9 C3' C B2107 108.381 116.349 45.485 1.00 36.27 C
ATOM 10 O3' C B2107 107.415 116.927 46.342 1.00 35.13 O
ATOM 11 C2' C B2107 108.355 116.931 44.083 1.00 35.00 C
ATOM 12 O2' C B2107 108.245 118.337 44.103 1.00 34.44 O
ATOM 13 C1' C B2107 109.753 116.556 43.597 1.00 34.28 C
ATOM 14 N1 C B2107 109.786 115.281 42.865 1.00 31.31 N
ATOM 15 C2 C B2107 109.349 115.266 41.549 1.00 30.60 C
ATOM 16 O2 C B2107 108.891 116.307 41.067 1.00 32.25 O
ATOM 17 N3 C B2107 109.426 114.123 40.831 1.00 31.01 N
ATOM 18 C4 C B2107 109.909 113.016 41.396 1.00 32.17 C
ATOM 19 N4 C B2107 109.996 111.910 40.649 1.00 31.98 N
ATOM 20 C5 C B2107 110.332 112.992 42.757 1.00 31.91 C
ATOM 21 C6 C B2107 110.253 114.137 43.449 1.00 30.08 C
ATOM 22 P C B2108 106.191 116.036 46.867 1.00 34.98 P
ATOM 23 OP1 C B2108 105.414 116.905 47.780 1.00 34.64 O
ATOM 24 OP2 C B2108 106.681 114.715 47.338 1.00 34.77 O
ATOM 25 O5' C B2108 105.329 115.800 45.559 1.00 30.75 O
TER
Atoms:
C2: (109.361,110.331,37.424)
OP1: (108.002,105.668,31.165)
OP2: (109.224,105.043,33.341)
C4: (110.312,108.331,38.140)
O5': (108.336,107.348,33.004)
C3': (109.077,110.229,33.076)
C1': (108.174,110.448,35.248)
O4': (107.360,109.552,34.503)
C5': (107.499,108.352,32.394)
P: (108.159,105.805,32.639)
O2: (109.103,111.535,37.579)
C4': (107.668,109.676,33.092)
C2': (109.049,111.206,34.250)
O2': (108.382,112.412,33.939)
N1: (108.921,109.680,36.253)
N3: (110.053,109.626,38.350)
N4: (111.008,107.670,39.068)
C6: (109.187,108.354,36.059)
C5: (109.870,107.650,36.964)
O3': (109.266,110.865,31.822)
OP1: (108.002,105.668,31.165)
OP2: (109.224,105.043,33.341)
C4: (110.312,108.331,38.140)
O5': (108.336,107.348,33.004)
C3': (109.077,110.229,33.076)
C1': (108.174,110.448,35.248)
O4': (107.360,109.552,34.503)
C5': (107.499,108.352,32.394)
P: (108.159,105.805,32.639)
O2: (109.103,111.535,37.579)
C4': (107.668,109.676,33.092)
C2': (109.049,111.206,34.250)
O2': (108.382,112.412,33.939)
N1: (108.921,109.680,36.253)
N3: (110.053,109.626,38.350)
N4: (111.008,107.670,39.068)
C6: (109.187,108.354,36.059)
C5: (109.870,107.650,36.964)
O3': (109.266,110.865,31.822)
C2: (109.349,115.266,41.549)
OP1: (110.558,113.538,48.983)
OP2: (110.721,111.996,46.933)
C4: (109.909,113.016,41.396)
O5': (110.253,114.427,46.678)
C3': (108.381,116.349,45.485)
C1': (109.753,116.556,43.597)
O4': (110.584,116.441,44.742)
C5': (110.334,115.815,47.042)
P: (110.958,113.316,47.571)
O2: (108.891,116.307,41.067)
C4': (109.795,116.670,45.932)
C2': (108.355,116.931,44.083)
O2': (108.245,118.337,44.103)
N1: (109.786,115.281,42.865)
N3: (109.426,114.123,40.831)
N4: (109.996,111.910,40.649)
C6: (110.253,114.137,43.449)
C5: (110.332,112.992,42.757)
O3': (107.415,116.927,46.342)
OP1: (110.558,113.538,48.983)
OP2: (110.721,111.996,46.933)
C4: (109.909,113.016,41.396)
O5': (110.253,114.427,46.678)
C3': (108.381,116.349,45.485)
C1': (109.753,116.556,43.597)
O4': (110.584,116.441,44.742)
C5': (110.334,115.815,47.042)
P: (110.958,113.316,47.571)
O2: (108.891,116.307,41.067)
C4': (109.795,116.670,45.932)
C2': (108.355,116.931,44.083)
O2': (108.245,118.337,44.103)
N1: (109.786,115.281,42.865)
N3: (109.426,114.123,40.831)
N4: (109.996,111.910,40.649)
C6: (110.253,114.137,43.449)
C5: (110.332,112.992,42.757)
O3': (107.415,116.927,46.342)
Image (generated by PyMOL):