ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A1034:A1056

Extra

PDB:
ATOM 1 O3' G A1033 23.350 105.481 100.802 1.00 30.39 O
ATOM 2 P G A1034 23.980 106.023 102.179 1.00 32.75 P
ATOM 3 OP1 G A1034 23.207 107.216 102.611 1.00 30.79 O
ATOM 4 OP2 G A1034 25.441 106.125 101.997 1.00 32.75 O
ATOM 5 O5' G A1034 23.749 104.823 103.202 1.00 31.64 O
ATOM 6 C5' G A1034 22.421 104.424 103.591 1.00 30.99 C
ATOM 7 C4' G A1034 22.470 103.334 104.639 1.00 31.36 C
ATOM 8 O4' G A1034 22.890 102.077 104.055 1.00 31.44 O
ATOM 9 C3' G A1034 23.411 103.521 105.815 1.00 31.89 C
ATOM 10 O3' G A1034 22.860 104.373 106.800 1.00 33.18 O
ATOM 11 C2' G A1034 23.495 102.101 106.339 1.00 32.32 C
ATOM 12 O2' G A1034 22.298 101.744 107.013 1.00 33.98 O
ATOM 13 C1' G A1034 23.593 101.317 105.027 1.00 32.87 C
ATOM 14 N9 G A1034 24.985 101.196 104.597 1.00 34.85 N
ATOM 15 C8 G A1034 25.587 101.825 103.535 1.00 35.84 C
ATOM 16 N7 G A1034 26.859 101.554 103.430 1.00 36.46 N
ATOM 17 C5 G A1034 27.113 100.692 104.485 1.00 36.91 C
ATOM 18 C6 G A1034 28.324 100.065 104.895 1.00 37.42 C
ATOM 19 O6 G A1034 29.457 100.182 104.420 1.00 38.32 O
ATOM 20 N1 G A1034 28.122 99.234 105.987 1.00 37.73 N
ATOM 21 C2 G A1034 26.920 99.037 106.613 1.00 39.06 C
ATOM 22 N2 G A1034 26.916 98.152 107.611 1.00 41.31 N
ATOM 23 N3 G A1034 25.796 99.648 106.272 1.00 38.50 N
ATOM 24 C4 G A1034 25.963 100.446 105.202 1.00 36.47 C
ATOM 25 P G A1035 23.811 105.406 107.584 1.00 36.43 P
ATOM 26 OP1 G A1035 22.878 106.174 108.426 1.00 34.53 O
ATOM 27 OP2 G A1035 24.685 106.121 106.613 1.00 36.01 O
ATOM 28 O5' G A1035 24.744 104.490 108.499 1.00 33.69 O
TER

ATOM 1 O3' U B1055 15.675 92.332 111.027 1.00 29.88 O
ATOM 2 P A B1056 17.107 92.585 111.686 1.00 29.89 P
ATOM 3 OP1 A B1056 17.497 91.395 112.463 1.00 28.89 O
ATOM 4 OP2 A B1056 17.049 93.915 112.345 1.00 27.23 O
ATOM 5 O5' A B1056 18.075 92.663 110.435 1.00 29.11 O
ATOM 6 C5' A B1056 18.533 91.473 109.788 1.00 30.61 C
ATOM 7 C4' A B1056 19.795 91.776 109.033 1.00 31.09 C
ATOM 8 O4' A B1056 19.500 92.696 107.953 1.00 31.31 O
ATOM 9 C3' A B1056 20.882 92.473 109.842 1.00 30.08 C
ATOM 10 O3' A B1056 21.652 91.497 110.540 1.00 29.16 O
ATOM 11 C2' A B1056 21.700 93.117 108.739 1.00 31.08 C
ATOM 12 O2' A B1056 22.480 92.127 108.105 1.00 32.07 O
ATOM 13 C1' A B1056 20.604 93.551 107.759 1.00 30.91 C
ATOM 14 N9 A B1056 20.162 94.939 107.912 1.00 31.05 N
ATOM 15 C8 A B1056 19.035 95.449 108.511 1.00 30.26 C
ATOM 16 N7 A B1056 18.940 96.753 108.433 1.00 30.27 N
ATOM 17 C5 A B1056 20.086 97.126 107.747 1.00 30.53 C
ATOM 18 C6 A B1056 20.582 98.375 107.329 1.00 31.03 C
ATOM 19 N6 A B1056 19.963 99.535 107.550 1.00 30.01 N
ATOM 20 N1 A B1056 21.756 98.389 106.662 1.00 32.10 N
ATOM 21 C2 A B1056 22.379 97.224 106.432 1.00 33.48 C
ATOM 22 N3 A B1056 22.013 95.996 106.770 1.00 32.03 N
ATOM 23 C4 A B1056 20.847 96.019 107.430 1.00 31.07 C
ATOM 24 P A B1057 22.235 91.809 112.003 1.00 30.20 P
ATOM 25 OP1 A B1057 22.729 90.510 112.486 1.00 28.77 O
ATOM 26 OP2 A B1057 21.219 92.553 112.792 1.00 29.69 O
ATOM 27 O5' A B1057 23.481 92.778 111.769 1.00 30.65 O
TER

Atoms:
OP1: (23.207,107.216,102.611)
OP2: (25.441,106.125,101.997)
C3': (23.411,103.521,105.815)
C1': (23.593,101.317,105.027)
C5': (22.421,104.424,103.591)
O6: (29.457,100.182,104.420)
O4': (22.890,102.077,104.055)
C8: (25.587,101.825,103.535)
C2: (26.920,99.037,106.613)
C6: (28.324,100.065,104.895)
C5: (27.113,100.692,104.485)
C4: (25.963,100.446,105.202)
P: (23.980,106.023,102.179)
C4': (22.470,103.334,104.639)
C2': (23.495,102.101,106.339)
O2': (22.298,101.744,107.013)
N1: (28.122,99.234,105.987)
N2: (26.916,98.152,107.611)
N3: (25.796,99.648,106.272)
N7: (26.859,101.554,103.430)
N9: (24.985,101.196,104.597)
O5': (23.749,104.823,103.202)
O3': (22.860,104.373,106.800)
OP1: (17.497,91.395,112.463)
OP2: (17.049,93.915,112.345)
C3': (20.882,92.473,109.842)
C1': (20.604,93.551,107.759)
C5': (18.533,91.473,109.788)
O4': (19.500,92.696,107.953)
C8: (19.035,95.449,108.511)
O2': (22.480,92.127,108.105)
C6: (20.582,98.375,107.329)
C5: (20.086,97.126,107.747)
C4: (20.847,96.019,107.430)
P: (17.107,92.585,111.686)
C4': (19.795,91.776,109.033)
C2': (21.700,93.117,108.739)
C2: (22.379,97.224,106.432)
N1: (21.756,98.389,106.662)
N3: (22.013,95.996,106.770)
N6: (19.963,99.535,107.550)
N7: (18.940,96.753,108.433)
N9: (20.162,94.939,107.912)
O5': (18.075,92.663,110.435)
O3': (21.652,91.497,110.540)
Image (generated by PyMOL):
PyMOL image
show in jmol