Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1888:A2113
Extra
PDB:
ATOM 1 O3' G A1887 116.788 93.962 53.892 1.00 67.49 O
ATOM 2 P A A1888 116.525 94.859 55.216 1.00 64.17 P
ATOM 3 OP1 A A1888 117.787 95.563 55.551 1.00 65.02 O
ATOM 4 OP2 A A1888 115.867 94.022 56.246 1.00 64.64 O
ATOM 5 O5' A A1888 115.507 95.981 54.722 1.00 60.52 O
ATOM 6 C5' A A1888 115.963 97.025 53.835 1.00 56.84 C
ATOM 7 C4' A A1888 115.059 98.237 53.900 1.00 53.45 C
ATOM 8 O4' A A1888 113.818 97.977 53.210 1.00 53.33 O
ATOM 9 C3' A A1888 114.627 98.719 55.271 1.00 51.39 C
ATOM 10 O3' A A1888 115.650 99.487 55.880 1.00 51.47 O
ATOM 11 C2' A A1888 113.400 99.553 54.935 1.00 50.80 C
ATOM 12 O2' A A1888 113.727 100.819 54.395 1.00 51.01 O
ATOM 13 C1' A A1888 112.777 98.717 53.819 1.00 50.83 C
ATOM 14 N9 A A1888 111.769 97.779 54.298 1.00 50.01 N
ATOM 15 C8 A A1888 111.910 96.451 54.625 1.00 49.76 C
ATOM 16 N7 A A1888 110.790 95.877 54.988 1.00 49.33 N
ATOM 17 C5 A A1888 109.854 96.898 54.906 1.00 49.01 C
ATOM 18 C6 A A1888 108.481 96.938 55.157 1.00 48.33 C
ATOM 19 N6 A A1888 107.775 95.885 55.570 1.00 47.27 N
ATOM 20 N1 A A1888 107.845 98.113 54.970 1.00 47.89 N
ATOM 21 C2 A A1888 108.555 99.173 54.566 1.00 47.59 C
ATOM 22 N3 A A1888 109.848 99.261 54.302 1.00 48.14 N
ATOM 23 C4 A A1888 110.447 98.075 54.491 1.00 49.20 C
ATOM 24 P A A1889 115.841 99.440 57.471 1.00 52.55 P
ATOM 25 OP1 A A1889 117.145 100.095 57.745 1.00 53.64 O
ATOM 26 OP2 A A1889 115.602 98.057 57.956 1.00 53.34 O
ATOM 27 O5' A A1889 114.659 100.355 58.024 1.00 52.42 O
TER
ATOM 1 O3' A B2112 100.179 96.767 52.205 1.00 40.01 O
ATOM 2 P G B2113 99.544 97.124 53.627 1.00 39.55 P
ATOM 3 OP1 G B2113 98.673 95.973 53.980 1.00 38.94 O
ATOM 4 OP2 G B2113 98.966 98.487 53.529 1.00 39.82 O
ATOM 5 O5' G B2113 100.787 97.191 54.618 1.00 37.73 O
ATOM 6 C5' G B2113 101.504 96.004 54.990 1.00 37.71 C
ATOM 7 C4' G B2113 102.763 96.382 55.713 1.00 37.91 C
ATOM 8 O4' G B2113 103.533 97.225 54.824 1.00 38.57 O
ATOM 9 C3' G B2113 102.575 97.239 56.959 1.00 38.48 C
ATOM 10 O3' G B2113 102.313 96.433 58.104 1.00 39.39 O
ATOM 11 C2' G B2113 103.920 97.933 57.050 1.00 38.47 C
ATOM 12 O2' G B2113 104.907 97.028 57.508 1.00 40.93 O
ATOM 13 C1' G B2113 104.185 98.234 55.573 1.00 38.94 C
ATOM 14 N9 G B2113 103.703 99.542 55.126 1.00 38.58 N
ATOM 15 C8 G B2113 102.596 99.833 54.356 1.00 39.14 C
ATOM 16 N7 G B2113 102.460 101.111 54.119 1.00 39.67 N
ATOM 17 C5 G B2113 103.534 101.693 54.777 1.00 38.85 C
ATOM 18 C6 G B2113 103.920 103.042 54.876 1.00 40.03 C
ATOM 19 O6 G B2113 103.374 104.032 54.383 1.00 39.77 O
ATOM 20 N1 G B2113 105.079 103.187 55.635 1.00 38.87 N
ATOM 21 C2 G B2113 105.781 102.158 56.215 1.00 38.03 C
ATOM 22 N2 G B2113 106.896 102.493 56.885 1.00 39.66 N
ATOM 23 N3 G B2113 105.423 100.896 56.135 1.00 36.75 N
ATOM 24 C4 G B2113 104.304 100.737 55.404 1.00 37.76 C
ATOM 25 P C B2114 101.518 97.046 59.365 1.00 41.64 P
ATOM 26 OP1 C B2114 101.303 95.958 60.346 1.00 42.72 O
ATOM 27 OP2 C B2114 100.366 97.826 58.879 1.00 42.08 O
ATOM 28 O5' C B2114 102.539 98.064 60.025 1.00 39.31 O
TER
ATOM 2 P A A1888 116.525 94.859 55.216 1.00 64.17 P
ATOM 3 OP1 A A1888 117.787 95.563 55.551 1.00 65.02 O
ATOM 4 OP2 A A1888 115.867 94.022 56.246 1.00 64.64 O
ATOM 5 O5' A A1888 115.507 95.981 54.722 1.00 60.52 O
ATOM 6 C5' A A1888 115.963 97.025 53.835 1.00 56.84 C
ATOM 7 C4' A A1888 115.059 98.237 53.900 1.00 53.45 C
ATOM 8 O4' A A1888 113.818 97.977 53.210 1.00 53.33 O
ATOM 9 C3' A A1888 114.627 98.719 55.271 1.00 51.39 C
ATOM 10 O3' A A1888 115.650 99.487 55.880 1.00 51.47 O
ATOM 11 C2' A A1888 113.400 99.553 54.935 1.00 50.80 C
ATOM 12 O2' A A1888 113.727 100.819 54.395 1.00 51.01 O
ATOM 13 C1' A A1888 112.777 98.717 53.819 1.00 50.83 C
ATOM 14 N9 A A1888 111.769 97.779 54.298 1.00 50.01 N
ATOM 15 C8 A A1888 111.910 96.451 54.625 1.00 49.76 C
ATOM 16 N7 A A1888 110.790 95.877 54.988 1.00 49.33 N
ATOM 17 C5 A A1888 109.854 96.898 54.906 1.00 49.01 C
ATOM 18 C6 A A1888 108.481 96.938 55.157 1.00 48.33 C
ATOM 19 N6 A A1888 107.775 95.885 55.570 1.00 47.27 N
ATOM 20 N1 A A1888 107.845 98.113 54.970 1.00 47.89 N
ATOM 21 C2 A A1888 108.555 99.173 54.566 1.00 47.59 C
ATOM 22 N3 A A1888 109.848 99.261 54.302 1.00 48.14 N
ATOM 23 C4 A A1888 110.447 98.075 54.491 1.00 49.20 C
ATOM 24 P A A1889 115.841 99.440 57.471 1.00 52.55 P
ATOM 25 OP1 A A1889 117.145 100.095 57.745 1.00 53.64 O
ATOM 26 OP2 A A1889 115.602 98.057 57.956 1.00 53.34 O
ATOM 27 O5' A A1889 114.659 100.355 58.024 1.00 52.42 O
TER
ATOM 1 O3' A B2112 100.179 96.767 52.205 1.00 40.01 O
ATOM 2 P G B2113 99.544 97.124 53.627 1.00 39.55 P
ATOM 3 OP1 G B2113 98.673 95.973 53.980 1.00 38.94 O
ATOM 4 OP2 G B2113 98.966 98.487 53.529 1.00 39.82 O
ATOM 5 O5' G B2113 100.787 97.191 54.618 1.00 37.73 O
ATOM 6 C5' G B2113 101.504 96.004 54.990 1.00 37.71 C
ATOM 7 C4' G B2113 102.763 96.382 55.713 1.00 37.91 C
ATOM 8 O4' G B2113 103.533 97.225 54.824 1.00 38.57 O
ATOM 9 C3' G B2113 102.575 97.239 56.959 1.00 38.48 C
ATOM 10 O3' G B2113 102.313 96.433 58.104 1.00 39.39 O
ATOM 11 C2' G B2113 103.920 97.933 57.050 1.00 38.47 C
ATOM 12 O2' G B2113 104.907 97.028 57.508 1.00 40.93 O
ATOM 13 C1' G B2113 104.185 98.234 55.573 1.00 38.94 C
ATOM 14 N9 G B2113 103.703 99.542 55.126 1.00 38.58 N
ATOM 15 C8 G B2113 102.596 99.833 54.356 1.00 39.14 C
ATOM 16 N7 G B2113 102.460 101.111 54.119 1.00 39.67 N
ATOM 17 C5 G B2113 103.534 101.693 54.777 1.00 38.85 C
ATOM 18 C6 G B2113 103.920 103.042 54.876 1.00 40.03 C
ATOM 19 O6 G B2113 103.374 104.032 54.383 1.00 39.77 O
ATOM 20 N1 G B2113 105.079 103.187 55.635 1.00 38.87 N
ATOM 21 C2 G B2113 105.781 102.158 56.215 1.00 38.03 C
ATOM 22 N2 G B2113 106.896 102.493 56.885 1.00 39.66 N
ATOM 23 N3 G B2113 105.423 100.896 56.135 1.00 36.75 N
ATOM 24 C4 G B2113 104.304 100.737 55.404 1.00 37.76 C
ATOM 25 P C B2114 101.518 97.046 59.365 1.00 41.64 P
ATOM 26 OP1 C B2114 101.303 95.958 60.346 1.00 42.72 O
ATOM 27 OP2 C B2114 100.366 97.826 58.879 1.00 42.08 O
ATOM 28 O5' C B2114 102.539 98.064 60.025 1.00 39.31 O
TER
Atoms:
OP1: (117.787,95.563,55.551)
OP2: (115.867,94.022,56.246)
C3': (114.627,98.719,55.271)
C1': (112.777,98.717,53.819)
C5': (115.963,97.025,53.835)
O4': (113.818,97.977,53.210)
C8: (111.910,96.451,54.625)
O2': (113.727,100.819,54.395)
C6: (108.481,96.938,55.157)
C5: (109.854,96.898,54.906)
C4: (110.447,98.075,54.491)
P: (116.525,94.859,55.216)
C4': (115.059,98.237,53.900)
C2': (113.400,99.553,54.935)
C2: (108.555,99.173,54.566)
N1: (107.845,98.113,54.970)
N3: (109.848,99.261,54.302)
N6: (107.775,95.885,55.570)
N7: (110.790,95.877,54.988)
N9: (111.769,97.779,54.298)
O5': (115.507,95.981,54.722)
O3': (115.650,99.487,55.880)
OP2: (115.867,94.022,56.246)
C3': (114.627,98.719,55.271)
C1': (112.777,98.717,53.819)
C5': (115.963,97.025,53.835)
O4': (113.818,97.977,53.210)
C8: (111.910,96.451,54.625)
O2': (113.727,100.819,54.395)
C6: (108.481,96.938,55.157)
C5: (109.854,96.898,54.906)
C4: (110.447,98.075,54.491)
P: (116.525,94.859,55.216)
C4': (115.059,98.237,53.900)
C2': (113.400,99.553,54.935)
C2: (108.555,99.173,54.566)
N1: (107.845,98.113,54.970)
N3: (109.848,99.261,54.302)
N6: (107.775,95.885,55.570)
N7: (110.790,95.877,54.988)
N9: (111.769,97.779,54.298)
O5': (115.507,95.981,54.722)
O3': (115.650,99.487,55.880)
OP1: (98.673,95.973,53.980)
OP2: (98.966,98.487,53.529)
C3': (102.575,97.239,56.959)
C1': (104.185,98.234,55.573)
C5': (101.504,96.004,54.990)
O6: (103.374,104.032,54.383)
O4': (103.533,97.225,54.824)
C8: (102.596,99.833,54.356)
C2: (105.781,102.158,56.215)
C6: (103.920,103.042,54.876)
C5: (103.534,101.693,54.777)
C4: (104.304,100.737,55.404)
P: (99.544,97.124,53.627)
C4': (102.763,96.382,55.713)
C2': (103.920,97.933,57.050)
O2': (104.907,97.028,57.508)
N1: (105.079,103.187,55.635)
N2: (106.896,102.493,56.885)
N3: (105.423,100.896,56.135)
N7: (102.460,101.111,54.119)
N9: (103.703,99.542,55.126)
O5': (100.787,97.191,54.618)
O3': (102.313,96.433,58.104)
OP2: (98.966,98.487,53.529)
C3': (102.575,97.239,56.959)
C1': (104.185,98.234,55.573)
C5': (101.504,96.004,54.990)
O6: (103.374,104.032,54.383)
O4': (103.533,97.225,54.824)
C8: (102.596,99.833,54.356)
C2: (105.781,102.158,56.215)
C6: (103.920,103.042,54.876)
C5: (103.534,101.693,54.777)
C4: (104.304,100.737,55.404)
P: (99.544,97.124,53.627)
C4': (102.763,96.382,55.713)
C2': (103.920,97.933,57.050)
O2': (104.907,97.028,57.508)
N1: (105.079,103.187,55.635)
N2: (106.896,102.493,56.885)
N3: (105.423,100.896,56.135)
N7: (102.460,101.111,54.119)
N9: (103.703,99.542,55.126)
O5': (100.787,97.191,54.618)
O3': (102.313,96.433,58.104)
Image (generated by PyMOL):