ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:01888:02113

Extra

PDB:
ATOM 1 O3' G A1887 117.021 94.464 54.320 1.00 82.38 O
ATOM 2 P A A1888 116.889 95.314 55.690 1.00 80.51 P
ATOM 3 OP1 A A1888 118.222 95.932 55.932 1.00 80.31 O
ATOM 4 OP2 A A1888 116.274 94.486 56.754 1.00 78.33 O
ATOM 5 O5' A A1888 115.882 96.493 55.307 1.00 76.62 O
ATOM 6 C5' A A1888 116.282 97.510 54.366 1.00 71.76 C
ATOM 7 C4' A A1888 115.333 98.690 54.399 1.00 68.92 C
ATOM 8 O4' A A1888 114.085 98.367 53.738 1.00 68.92 O
ATOM 9 C3' A A1888 114.901 99.211 55.756 1.00 66.96 C
ATOM 10 O3' A A1888 115.915 100.016 56.334 1.00 64.66 O
ATOM 11 C2' A A1888 113.657 100.016 55.394 1.00 67.10 C
ATOM 12 O2' A A1888 113.959 101.261 54.800 1.00 67.63 O
ATOM 13 C1' A A1888 113.039 99.138 54.306 1.00 67.97 C
ATOM 14 N9 A A1888 111.996 98.231 54.787 1.00 68.91 N
ATOM 15 C8 A A1888 112.115 96.911 55.152 1.00 70.04 C
ATOM 16 N7 A A1888 110.982 96.357 55.509 1.00 70.11 N
ATOM 17 C5 A A1888 110.057 97.380 55.379 1.00 68.86 C
ATOM 18 C6 A A1888 108.679 97.431 55.598 1.00 68.93 C
ATOM 19 N6 A A1888 107.955 96.389 56.010 1.00 68.10 N
ATOM 20 N1 A A1888 108.054 98.607 55.376 1.00 70.40 N
ATOM 21 C2 A A1888 108.779 99.653 54.960 1.00 69.32 C
ATOM 22 N3 A A1888 110.079 99.726 54.715 1.00 68.59 N
ATOM 23 C4 A A1888 110.668 98.542 54.946 1.00 68.67 C
ATOM 24 P A A1889 116.133 100.002 57.925 1.00 64.26 P
ATOM 25 OP1 A A1889 117.441 100.657 58.189 1.00 64.09 O
ATOM 26 OP2 A A1889 115.888 98.630 58.439 1.00 63.63 O
ATOM 27 O5' A A1889 114.967 100.939 58.479 1.00 62.73 O
TER

ATOM 1 O3' A B2112 100.468 97.327 52.676 1.00 52.05 O
ATOM 2 P G B2113 99.796 97.656 54.096 1.00 55.42 P
ATOM 3 OP1 G B2113 98.967 96.469 54.442 1.00 55.31 O
ATOM 4 OP2 G B2113 99.173 99.002 54.070 1.00 53.76 O
ATOM 5 O5' G B2113 101.027 97.739 55.101 1.00 52.89 O
ATOM 6 C5' G B2113 101.798 96.578 55.424 1.00 51.21 C
ATOM 7 C4' G B2113 103.061 96.986 56.132 1.00 51.57 C
ATOM 8 O4' G B2113 103.847 97.841 55.258 1.00 50.20 O
ATOM 9 C3' G B2113 102.859 97.834 57.374 1.00 51.64 C
ATOM 10 O3' G B2113 102.549 97.042 58.509 1.00 52.31 O
ATOM 11 C2' G B2113 104.206 98.529 57.502 1.00 51.83 C
ATOM 12 O2' G B2113 105.195 97.670 58.029 1.00 53.54 O
ATOM 13 C1' G B2113 104.529 98.815 56.034 1.00 50.68 C
ATOM 14 N9 G B2113 104.098 100.141 55.601 1.00 50.54 N
ATOM 15 C8 G B2113 102.990 100.452 54.847 1.00 50.91 C
ATOM 16 N7 G B2113 102.868 101.732 54.617 1.00 51.50 N
ATOM 17 C5 G B2113 103.959 102.303 55.257 1.00 51.48 C
ATOM 18 C6 G B2113 104.359 103.662 55.354 1.00 52.78 C
ATOM 19 O6 G B2113 103.815 104.662 54.874 1.00 54.77 O
ATOM 20 N1 G B2113 105.526 103.799 56.099 1.00 52.36 N
ATOM 21 C2 G B2113 106.223 102.764 56.670 1.00 52.78 C
ATOM 22 N2 G B2113 107.333 103.107 57.340 1.00 53.40 N
ATOM 23 N3 G B2113 105.863 101.491 56.587 1.00 50.75 N
ATOM 24 C4 G B2113 104.729 101.335 55.871 1.00 51.03 C
ATOM 25 P C B2114 101.771 97.702 59.748 1.00 52.73 P
ATOM 26 OP1 C B2114 101.507 96.639 60.750 1.00 52.85 O
ATOM 27 OP2 C B2114 100.635 98.487 59.194 1.00 52.21 O
ATOM 28 O5' C B2114 102.828 98.715 60.371 1.00 50.94 O
TER

Atoms:
OP1: (118.222,95.932,55.932)
OP2: (116.274,94.486,56.754)
C3': (114.901,99.211,55.756)
C1': (113.039,99.138,54.306)
C5': (116.282,97.510,54.366)
O4': (114.085,98.367,53.738)
C8: (112.115,96.911,55.152)
O2': (113.959,101.261,54.800)
C6: (108.679,97.431,55.598)
C5: (110.057,97.380,55.379)
C4: (110.668,98.542,54.946)
P: (116.889,95.314,55.690)
C4': (115.333,98.690,54.399)
C2': (113.657,100.016,55.394)
C2: (108.779,99.653,54.960)
N1: (108.054,98.607,55.376)
N3: (110.079,99.726,54.715)
N6: (107.955,96.389,56.010)
N7: (110.982,96.357,55.509)
N9: (111.996,98.231,54.787)
O5': (115.882,96.493,55.307)
O3': (115.915,100.016,56.334)
OP1: (98.967,96.469,54.442)
OP2: (99.173,99.002,54.070)
C3': (102.859,97.834,57.374)
C1': (104.529,98.815,56.034)
C5': (101.798,96.578,55.424)
O6: (103.815,104.662,54.874)
O4': (103.847,97.841,55.258)
C8: (102.990,100.452,54.847)
C2: (106.223,102.764,56.670)
C6: (104.359,103.662,55.354)
C5: (103.959,102.303,55.257)
C4: (104.729,101.335,55.871)
P: (99.796,97.656,54.096)
C4': (103.061,96.986,56.132)
C2': (104.206,98.529,57.502)
O2': (105.195,97.670,58.029)
N1: (105.526,103.799,56.099)
N2: (107.333,103.107,57.340)
N3: (105.863,101.491,56.587)
N7: (102.868,101.732,54.617)
N9: (104.098,100.141,55.601)
O5': (101.027,97.739,55.101)
O3': (102.549,97.042,58.509)
Image (generated by PyMOL):
PyMOL image
show in jmol