ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:01888:02113

Extra

PDB:
ATOM 1 O3' G A1887 116.740 94.089 54.078 1.00 84.01 O
ATOM 2 P A A1888 116.571 94.984 55.413 1.00 80.93 P
ATOM 3 OP1 A A1888 117.878 95.645 55.674 1.00 81.30 O
ATOM 4 OP2 A A1888 115.942 94.184 56.487 1.00 80.81 O
ATOM 5 O5' A A1888 115.552 96.126 54.970 1.00 78.20 O
ATOM 6 C5' A A1888 115.962 97.146 54.040 1.00 73.54 C
ATOM 7 C4' A A1888 115.052 98.347 54.127 1.00 70.44 C
ATOM 8 O4' A A1888 113.800 98.089 53.449 1.00 70.87 O
ATOM 9 C3' A A1888 114.634 98.790 55.516 1.00 69.07 C
ATOM 10 O3' A A1888 115.658 99.543 56.137 1.00 67.70 O
ATOM 11 C2' A A1888 113.400 99.626 55.213 1.00 69.29 C
ATOM 12 O2' A A1888 113.727 100.891 54.682 1.00 68.98 O
ATOM 13 C1' A A1888 112.759 98.809 54.091 1.00 70.43 C
ATOM 14 N9 A A1888 111.755 97.852 54.557 1.00 70.74 N
ATOM 15 C8 A A1888 111.915 96.511 54.821 1.00 70.94 C
ATOM 16 N7 A A1888 110.808 95.907 55.179 1.00 71.58 N
ATOM 17 C5 A A1888 109.857 96.919 55.162 1.00 70.86 C
ATOM 18 C6 A A1888 108.483 96.927 55.436 1.00 70.73 C
ATOM 19 N6 A A1888 107.793 95.842 55.799 1.00 69.97 N
ATOM 20 N1 A A1888 107.829 98.104 55.327 1.00 70.55 N
ATOM 21 C2 A A1888 108.519 99.190 54.970 1.00 69.50 C
ATOM 22 N3 A A1888 109.809 99.310 54.687 1.00 70.24 N
ATOM 23 C4 A A1888 110.430 98.125 54.798 1.00 70.49 C
ATOM 24 P A A1889 115.817 99.511 57.734 1.00 67.50 P
ATOM 25 OP1 A A1889 117.128 100.141 58.041 1.00 67.83 O
ATOM 26 OP2 A A1889 115.529 98.144 58.241 1.00 67.42 O
ATOM 27 O5' A A1889 114.648 100.467 58.243 1.00 67.21 O
TER

ATOM 1 O3' A B2112 100.238 96.883 52.396 1.00 55.55 O
ATOM 2 P G B2113 99.608 97.208 53.842 1.00 56.27 P
ATOM 3 OP1 G B2113 98.803 96.014 54.224 1.00 56.26 O
ATOM 4 OP2 G B2113 98.967 98.543 53.835 1.00 57.59 O
ATOM 5 O5' G B2113 100.880 97.308 54.796 1.00 57.05 O
ATOM 6 C5' G B2113 101.630 96.131 55.159 1.00 56.33 C
ATOM 7 C4' G B2113 102.888 96.524 55.890 1.00 54.76 C
ATOM 8 O4' G B2113 103.660 97.401 55.032 1.00 54.38 O
ATOM 9 C3' G B2113 102.693 97.343 57.153 1.00 55.04 C
ATOM 10 O3' G B2113 102.420 96.535 58.284 1.00 55.68 O
ATOM 11 C2' G B2113 104.031 98.048 57.279 1.00 55.51 C
ATOM 12 O2' G B2113 105.043 97.175 57.744 1.00 58.03 O
ATOM 13 C1' G B2113 104.320 98.378 55.818 1.00 54.48 C
ATOM 14 N9 G B2113 103.861 99.702 55.402 1.00 53.88 N
ATOM 15 C8 G B2113 102.773 100.002 54.616 1.00 53.47 C
ATOM 16 N7 G B2113 102.657 101.279 54.369 1.00 53.46 N
ATOM 17 C5 G B2113 103.724 101.858 55.041 1.00 53.75 C
ATOM 18 C6 G B2113 104.126 103.214 55.133 1.00 55.21 C
ATOM 19 O6 G B2113 103.614 104.209 54.604 1.00 57.99 O
ATOM 20 N1 G B2113 105.253 103.361 55.929 1.00 54.67 N
ATOM 21 C2 G B2113 105.917 102.336 56.548 1.00 54.39 C
ATOM 22 N2 G B2113 106.991 102.682 57.268 1.00 55.33 N
ATOM 23 N3 G B2113 105.561 101.068 56.466 1.00 53.30 N
ATOM 24 C4 G B2113 104.464 100.902 55.700 1.00 53.67 C
ATOM 25 P C B2114 101.590 97.149 59.515 1.00 56.50 P
ATOM 26 OP1 C B2114 101.323 96.051 60.476 1.00 58.56 O
ATOM 27 OP2 C B2114 100.451 97.922 58.950 1.00 58.40 O
ATOM 28 O5' C B2114 102.590 98.179 60.204 1.00 55.13 O
TER

Atoms:
OP1: (117.878,95.645,55.674)
OP2: (115.942,94.184,56.487)
C3': (114.634,98.790,55.516)
C1': (112.759,98.809,54.091)
C5': (115.962,97.146,54.040)
O4': (113.800,98.089,53.449)
C8: (111.915,96.511,54.821)
O2': (113.727,100.891,54.682)
C6: (108.483,96.927,55.436)
C5: (109.857,96.919,55.162)
C4: (110.430,98.125,54.798)
P: (116.571,94.984,55.413)
C4': (115.052,98.347,54.127)
C2': (113.400,99.626,55.213)
C2: (108.519,99.190,54.970)
N1: (107.829,98.104,55.327)
N3: (109.809,99.310,54.687)
N6: (107.793,95.842,55.799)
N7: (110.808,95.907,55.179)
N9: (111.755,97.852,54.557)
O5': (115.552,96.126,54.970)
O3': (115.658,99.543,56.137)
OP1: (98.803,96.014,54.224)
OP2: (98.967,98.543,53.835)
C3': (102.693,97.343,57.153)
C1': (104.320,98.378,55.818)
C5': (101.630,96.131,55.159)
O6: (103.614,104.209,54.604)
O4': (103.660,97.401,55.032)
C8: (102.773,100.002,54.616)
C2: (105.917,102.336,56.548)
C6: (104.126,103.214,55.133)
C5: (103.724,101.858,55.041)
C4: (104.464,100.902,55.700)
P: (99.608,97.208,53.842)
C4': (102.888,96.524,55.890)
C2': (104.031,98.048,57.279)
O2': (105.043,97.175,57.744)
N1: (105.253,103.361,55.929)
N2: (106.991,102.682,57.268)
N3: (105.561,101.068,56.466)
N7: (102.657,101.279,54.369)
N9: (103.861,99.702,55.402)
O5': (100.880,97.308,54.796)
O3': (102.420,96.535,58.284)
Image (generated by PyMOL):
PyMOL image
show in jmol