Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2488:A2487
Extra
PDB:
ATOM 1 O3' A A2487 108.366 -51.692 64.701 1.00 90.48 O
ATOM 2 P C A2488 109.658 -50.818 64.320 1.00 77.10 P
ATOM 3 OP1 C A2488 110.848 -51.624 64.681 1.00 78.40 O
ATOM 4 OP2 C A2488 109.487 -49.490 64.937 1.00 77.29 O
ATOM 5 O5' C A2488 109.551 -50.692 62.745 1.00 92.28 O
ATOM 6 C5' C A2488 110.676 -50.304 61.980 1.00 95.70 C
ATOM 7 C4' C A2488 110.273 -49.817 60.620 1.00 89.06 C
ATOM 8 O4' C A2488 108.854 -49.972 60.451 1.00 74.40 O
ATOM 9 C3' C A2488 110.538 -48.349 60.339 1.00 85.22 C
ATOM 10 O3' C A2488 111.861 -48.122 59.906 1.00 96.26 O
ATOM 11 C2' C A2488 109.507 -48.015 59.276 1.00 81.57 C
ATOM 12 O2' C A2488 109.974 -48.383 57.988 1.00 77.62 O
ATOM 13 C1' C A2488 108.348 -48.935 59.654 1.00 81.90 C
ATOM 14 N1 C A2488 107.314 -48.234 60.417 1.00 75.26 N
ATOM 15 C2 C A2488 106.556 -47.225 59.822 1.00 75.71 C
ATOM 16 O2 C A2488 106.748 -46.890 58.642 1.00 69.48 O
ATOM 17 N3 C A2488 105.618 -46.617 60.561 1.00 81.48 N
ATOM 18 C4 C A2488 105.414 -46.976 61.818 1.00 77.94 C
ATOM 19 N4 C A2488 104.471 -46.334 62.506 1.00 86.33 N
ATOM 20 C5 C A2488 106.160 -48.010 62.427 1.00 77.08 C
ATOM 21 C6 C A2488 107.092 -48.614 61.696 1.00 78.14 C
ATOM 22 P G A2489 112.940 -47.493 60.888 1.00127.99 P
ATOM 23 OP1 G A2489 114.281 -47.907 60.406 1.00155.39 O
ATOM 24 OP2 G A2489 112.535 -47.842 62.260 1.00148.42 O
ATOM 25 O5' G A2489 112.726 -45.962 60.640 1.00 59.73 O
TER
ATOM 1 O3' U B2486 104.031 -49.855 67.465 1.00 72.52 O
ATOM 2 P A B2487 105.355 -49.258 66.793 1.00 64.63 P
ATOM 3 OP1 A B2487 106.239 -48.811 67.891 1.00155.78 O
ATOM 4 OP2 A B2487 104.924 -48.270 65.784 1.00144.76 O
ATOM 5 O5' A B2487 105.989 -50.536 66.080 1.00 87.27 O
ATOM 6 C5' A B2487 105.195 -51.383 65.261 1.00 92.97 C
ATOM 7 C4' A B2487 106.027 -52.360 64.463 1.00 90.56 C
ATOM 8 O4' A B2487 105.246 -52.863 63.350 1.00 96.41 O
ATOM 9 C3' A B2487 107.278 -51.804 63.802 1.00 86.54 C
ATOM 10 O3' A B2487 108.366 -51.692 64.701 1.00 90.48 O
ATOM 11 C2' A B2487 107.524 -52.798 62.672 1.00 93.17 C
ATOM 12 O2' A B2487 108.161 -53.967 63.163 1.00 95.30 O
ATOM 13 C1' A B2487 106.098 -53.170 62.268 1.00 98.49 C
ATOM 14 N9 A B2487 105.640 -52.446 61.060 1.00105.18 N
ATOM 15 C8 A B2487 105.984 -52.732 59.750 1.00108.15 C
ATOM 16 N7 A B2487 105.431 -51.950 58.841 1.00 97.36 N
ATOM 17 C5 A B2487 104.667 -51.096 59.608 1.00 93.39 C
ATOM 18 C6 A B2487 103.854 -50.044 59.231 1.00 87.84 C
ATOM 19 N6 A B2487 103.672 -49.672 57.973 1.00 83.02 N
ATOM 20 N1 A B2487 103.242 -49.390 60.223 1.00 96.49 N
ATOM 21 C2 A B2487 103.439 -49.781 61.488 1.00 91.82 C
ATOM 22 N3 A B2487 104.175 -50.757 61.977 1.00 82.03 N
ATOM 23 C4 A B2487 104.779 -51.379 60.968 1.00 94.34 C
ATOM 24 P C B2488 109.658 -50.818 64.320 1.00 77.10 P
ATOM 25 OP1 C B2488 110.848 -51.624 64.681 1.00 78.40 O
ATOM 26 OP2 C B2488 109.487 -49.490 64.937 1.00 77.29 O
ATOM 27 O5' C B2488 109.551 -50.692 62.745 1.00 92.28 O
TER
ATOM 2 P C A2488 109.658 -50.818 64.320 1.00 77.10 P
ATOM 3 OP1 C A2488 110.848 -51.624 64.681 1.00 78.40 O
ATOM 4 OP2 C A2488 109.487 -49.490 64.937 1.00 77.29 O
ATOM 5 O5' C A2488 109.551 -50.692 62.745 1.00 92.28 O
ATOM 6 C5' C A2488 110.676 -50.304 61.980 1.00 95.70 C
ATOM 7 C4' C A2488 110.273 -49.817 60.620 1.00 89.06 C
ATOM 8 O4' C A2488 108.854 -49.972 60.451 1.00 74.40 O
ATOM 9 C3' C A2488 110.538 -48.349 60.339 1.00 85.22 C
ATOM 10 O3' C A2488 111.861 -48.122 59.906 1.00 96.26 O
ATOM 11 C2' C A2488 109.507 -48.015 59.276 1.00 81.57 C
ATOM 12 O2' C A2488 109.974 -48.383 57.988 1.00 77.62 O
ATOM 13 C1' C A2488 108.348 -48.935 59.654 1.00 81.90 C
ATOM 14 N1 C A2488 107.314 -48.234 60.417 1.00 75.26 N
ATOM 15 C2 C A2488 106.556 -47.225 59.822 1.00 75.71 C
ATOM 16 O2 C A2488 106.748 -46.890 58.642 1.00 69.48 O
ATOM 17 N3 C A2488 105.618 -46.617 60.561 1.00 81.48 N
ATOM 18 C4 C A2488 105.414 -46.976 61.818 1.00 77.94 C
ATOM 19 N4 C A2488 104.471 -46.334 62.506 1.00 86.33 N
ATOM 20 C5 C A2488 106.160 -48.010 62.427 1.00 77.08 C
ATOM 21 C6 C A2488 107.092 -48.614 61.696 1.00 78.14 C
ATOM 22 P G A2489 112.940 -47.493 60.888 1.00127.99 P
ATOM 23 OP1 G A2489 114.281 -47.907 60.406 1.00155.39 O
ATOM 24 OP2 G A2489 112.535 -47.842 62.260 1.00148.42 O
ATOM 25 O5' G A2489 112.726 -45.962 60.640 1.00 59.73 O
TER
ATOM 1 O3' U B2486 104.031 -49.855 67.465 1.00 72.52 O
ATOM 2 P A B2487 105.355 -49.258 66.793 1.00 64.63 P
ATOM 3 OP1 A B2487 106.239 -48.811 67.891 1.00155.78 O
ATOM 4 OP2 A B2487 104.924 -48.270 65.784 1.00144.76 O
ATOM 5 O5' A B2487 105.989 -50.536 66.080 1.00 87.27 O
ATOM 6 C5' A B2487 105.195 -51.383 65.261 1.00 92.97 C
ATOM 7 C4' A B2487 106.027 -52.360 64.463 1.00 90.56 C
ATOM 8 O4' A B2487 105.246 -52.863 63.350 1.00 96.41 O
ATOM 9 C3' A B2487 107.278 -51.804 63.802 1.00 86.54 C
ATOM 10 O3' A B2487 108.366 -51.692 64.701 1.00 90.48 O
ATOM 11 C2' A B2487 107.524 -52.798 62.672 1.00 93.17 C
ATOM 12 O2' A B2487 108.161 -53.967 63.163 1.00 95.30 O
ATOM 13 C1' A B2487 106.098 -53.170 62.268 1.00 98.49 C
ATOM 14 N9 A B2487 105.640 -52.446 61.060 1.00105.18 N
ATOM 15 C8 A B2487 105.984 -52.732 59.750 1.00108.15 C
ATOM 16 N7 A B2487 105.431 -51.950 58.841 1.00 97.36 N
ATOM 17 C5 A B2487 104.667 -51.096 59.608 1.00 93.39 C
ATOM 18 C6 A B2487 103.854 -50.044 59.231 1.00 87.84 C
ATOM 19 N6 A B2487 103.672 -49.672 57.973 1.00 83.02 N
ATOM 20 N1 A B2487 103.242 -49.390 60.223 1.00 96.49 N
ATOM 21 C2 A B2487 103.439 -49.781 61.488 1.00 91.82 C
ATOM 22 N3 A B2487 104.175 -50.757 61.977 1.00 82.03 N
ATOM 23 C4 A B2487 104.779 -51.379 60.968 1.00 94.34 C
ATOM 24 P C B2488 109.658 -50.818 64.320 1.00 77.10 P
ATOM 25 OP1 C B2488 110.848 -51.624 64.681 1.00 78.40 O
ATOM 26 OP2 C B2488 109.487 -49.490 64.937 1.00 77.29 O
ATOM 27 O5' C B2488 109.551 -50.692 62.745 1.00 92.28 O
TER
Atoms:
C2: (106.556,-47.225,59.822)
OP1: (110.848,-51.624,64.681)
OP2: (109.487,-49.490,64.937)
C4: (105.414,-46.976,61.818)
O5': (109.551,-50.692,62.745)
C3': (110.538,-48.349,60.339)
C1': (108.348,-48.935,59.654)
O4': (108.854,-49.972,60.451)
C5': (110.676,-50.304,61.980)
P: (109.658,-50.818,64.320)
O2: (106.748,-46.890,58.642)
C4': (110.273,-49.817,60.620)
C2': (109.507,-48.015,59.276)
O2': (109.974,-48.383,57.988)
N1: (107.314,-48.234,60.417)
N3: (105.618,-46.617,60.561)
N4: (104.471,-46.334,62.506)
C6: (107.092,-48.614,61.696)
C5: (106.160,-48.010,62.427)
O3': (111.861,-48.122,59.906)
OP1: (110.848,-51.624,64.681)
OP2: (109.487,-49.490,64.937)
C4: (105.414,-46.976,61.818)
O5': (109.551,-50.692,62.745)
C3': (110.538,-48.349,60.339)
C1': (108.348,-48.935,59.654)
O4': (108.854,-49.972,60.451)
C5': (110.676,-50.304,61.980)
P: (109.658,-50.818,64.320)
O2: (106.748,-46.890,58.642)
C4': (110.273,-49.817,60.620)
C2': (109.507,-48.015,59.276)
O2': (109.974,-48.383,57.988)
N1: (107.314,-48.234,60.417)
N3: (105.618,-46.617,60.561)
N4: (104.471,-46.334,62.506)
C6: (107.092,-48.614,61.696)
C5: (106.160,-48.010,62.427)
O3': (111.861,-48.122,59.906)
OP1: (106.239,-48.811,67.891)
OP2: (104.924,-48.270,65.784)
C3': (107.278,-51.804,63.802)
C1': (106.098,-53.170,62.268)
C5': (105.195,-51.383,65.261)
O4': (105.246,-52.863,63.350)
C8: (105.984,-52.732,59.750)
O2': (108.161,-53.967,63.163)
C6: (103.854,-50.044,59.231)
C5: (104.667,-51.096,59.608)
C4: (104.779,-51.379,60.968)
P: (105.355,-49.258,66.793)
C4': (106.027,-52.360,64.463)
C2': (107.524,-52.798,62.672)
C2: (103.439,-49.781,61.488)
N1: (103.242,-49.390,60.223)
N3: (104.175,-50.757,61.977)
N6: (103.672,-49.672,57.973)
N7: (105.431,-51.950,58.841)
N9: (105.640,-52.446,61.060)
O5': (105.989,-50.536,66.080)
O3': (108.366,-51.692,64.701)
OP2: (104.924,-48.270,65.784)
C3': (107.278,-51.804,63.802)
C1': (106.098,-53.170,62.268)
C5': (105.195,-51.383,65.261)
O4': (105.246,-52.863,63.350)
C8: (105.984,-52.732,59.750)
O2': (108.161,-53.967,63.163)
C6: (103.854,-50.044,59.231)
C5: (104.667,-51.096,59.608)
C4: (104.779,-51.379,60.968)
P: (105.355,-49.258,66.793)
C4': (106.027,-52.360,64.463)
C2': (107.524,-52.798,62.672)
C2: (103.439,-49.781,61.488)
N1: (103.242,-49.390,60.223)
N3: (104.175,-50.757,61.977)
N6: (103.672,-49.672,57.973)
N7: (105.431,-51.950,58.841)
N9: (105.640,-52.446,61.060)
O5': (105.989,-50.536,66.080)
O3': (108.366,-51.692,64.701)
Image (generated by PyMOL):