ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01061:01206

Extra

PDB:
ATOM 1 O3' U A1060 18.538 105.290 123.794 1.00 39.45 O
ATOM 2 P C A1061 19.050 105.060 125.296 1.00 40.00 P
ATOM 3 OP1 C A1061 20.481 104.667 125.245 1.00 40.52 O
ATOM 4 OP2 C A1061 18.073 104.151 125.945 1.00 39.44 O
ATOM 5 O5' C A1061 18.979 106.510 125.955 1.00 34.21 O
ATOM 6 C5' C A1061 17.769 106.996 126.548 1.00 33.97 C
ATOM 7 C4' C A1061 17.910 108.456 126.896 1.00 33.54 C
ATOM 8 O4' C A1061 18.995 108.609 127.841 1.00 34.88 O
ATOM 9 C3' C A1061 18.299 109.366 125.745 1.00 34.93 C
ATOM 10 O3' C A1061 17.177 109.754 124.974 1.00 37.17 O
ATOM 11 C2' C A1061 18.950 110.536 126.460 1.00 35.00 C
ATOM 12 O2' C A1061 18.020 111.425 127.041 1.00 34.84 O
ATOM 13 C1' C A1061 19.710 109.806 127.567 1.00 33.87 C
ATOM 14 N1 C A1061 21.083 109.442 127.168 1.00 32.80 N
ATOM 15 C2 C A1061 22.063 110.435 127.129 1.00 33.75 C
ATOM 16 O2 C A1061 21.751 111.599 127.403 1.00 35.11 O
ATOM 17 N3 C A1061 23.328 110.100 126.790 1.00 34.25 N
ATOM 18 C4 C A1061 23.627 108.837 126.499 1.00 31.10 C
ATOM 19 N4 C A1061 24.886 108.552 126.198 1.00 30.10 N
ATOM 20 C5 C A1061 22.647 107.811 126.512 1.00 32.13 C
ATOM 21 C6 C A1061 21.401 108.152 126.846 1.00 31.68 C
ATOM 22 P C A1062 17.383 110.192 123.448 1.00 38.24 P
ATOM 23 OP1 C A1062 16.046 110.330 122.825 1.00 38.36 O
ATOM 24 OP2 C A1062 18.381 109.274 122.838 1.00 38.91 O
ATOM 25 O5' C A1062 18.025 111.641 123.578 1.00 36.43 O
TER

ATOM 1 O3' A B1205 22.391 104.266 133.242 1.00 46.39 O
ATOM 2 P A B1206 20.960 104.402 132.532 1.00 46.85 P
ATOM 3 OP1 A B1206 20.270 105.554 133.187 1.00 46.53 O
ATOM 4 OP2 A B1206 20.300 103.067 132.503 1.00 43.53 O
ATOM 5 O5' A B1206 21.333 104.841 131.044 1.00 43.60 O
ATOM 6 C5' A B1206 21.865 103.896 130.088 1.00 38.39 C
ATOM 7 C4' A B1206 23.194 104.376 129.550 1.00 35.88 C
ATOM 8 O4' A B1206 23.065 105.760 129.117 1.00 35.67 O
ATOM 9 C3' A B1206 24.366 104.358 130.526 1.00 34.53 C
ATOM 10 O3' A B1206 25.559 104.158 129.784 1.00 35.61 O
ATOM 11 C2' A B1206 24.373 105.785 131.058 1.00 34.41 C
ATOM 12 O2' A B1206 25.635 106.202 131.535 1.00 33.89 O
ATOM 13 C1' A B1206 24.006 106.563 129.799 1.00 34.51 C
ATOM 14 N9 A B1206 23.398 107.863 130.059 1.00 35.10 N
ATOM 15 C8 A B1206 22.111 108.130 130.457 1.00 35.65 C
ATOM 16 N7 A B1206 21.855 109.407 130.593 1.00 37.13 N
ATOM 17 C5 A B1206 23.056 110.024 130.268 1.00 38.03 C
ATOM 18 C6 A B1206 23.443 111.378 130.210 1.00 37.90 C
ATOM 19 N6 A B1206 22.632 112.398 130.516 1.00 37.45 N
ATOM 20 N1 A B1206 24.710 111.652 129.827 1.00 36.59 N
ATOM 21 C2 A B1206 25.526 110.634 129.540 1.00 37.22 C
ATOM 22 N3 A B1206 25.284 109.325 129.569 1.00 39.05 N
ATOM 23 C4 A B1206 24.015 109.084 129.941 1.00 37.42 C
ATOM 24 P A B1207 25.988 102.684 129.330 1.00 37.65 P
ATOM 25 OP1 A B1207 26.342 102.795 127.891 1.00 36.87 O
ATOM 26 OP2 A B1207 24.958 101.709 129.756 1.00 37.71 O
ATOM 27 O5' A B1207 27.316 102.400 130.162 1.00 39.06 O
TER

Atoms:
C2: (22.063,110.435,127.129)
OP1: (20.481,104.667,125.245)
OP2: (18.073,104.151,125.945)
C4: (23.627,108.837,126.499)
O5': (18.979,106.510,125.955)
C3': (18.299,109.366,125.745)
C1': (19.710,109.806,127.567)
O4': (18.995,108.609,127.841)
C5': (17.769,106.996,126.548)
P: (19.050,105.060,125.296)
O2: (21.751,111.599,127.403)
C4': (17.910,108.456,126.896)
C2': (18.950,110.536,126.460)
O2': (18.020,111.425,127.041)
N1: (21.083,109.442,127.168)
N3: (23.328,110.100,126.790)
N4: (24.886,108.552,126.198)
C6: (21.401,108.152,126.846)
C5: (22.647,107.811,126.512)
O3': (17.177,109.754,124.974)
OP1: (20.270,105.554,133.187)
OP2: (20.300,103.067,132.503)
C3': (24.366,104.358,130.526)
C1': (24.006,106.563,129.799)
C5': (21.865,103.896,130.088)
O4': (23.065,105.760,129.117)
C8: (22.111,108.130,130.457)
O2': (25.635,106.202,131.535)
C6: (23.443,111.378,130.210)
C5: (23.056,110.024,130.268)
C4: (24.015,109.084,129.941)
P: (20.960,104.402,132.532)
C4': (23.194,104.376,129.550)
C2': (24.373,105.785,131.058)
C2: (25.526,110.634,129.540)
N1: (24.710,111.652,129.827)
N3: (25.284,109.325,129.569)
N6: (22.632,112.398,130.516)
N7: (21.855,109.407,130.593)
N9: (23.398,107.863,130.059)
O5': (21.333,104.841,131.044)
O3': (25.559,104.158,129.784)
Image (generated by PyMOL):
PyMOL image
show in jmol