ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0279:0349

Extra

PDB:
ATOM 1 O3' C A 278 61.024 127.886 -1.773 1.00 90.87 O
ATOM 2 P C A 279 59.980 128.368 -0.645 1.00 89.63 P
ATOM 3 OP1 C A 279 59.826 129.842 -0.773 1.00 89.75 O
ATOM 4 OP2 C A 279 60.401 127.785 0.658 1.00 89.79 O
ATOM 5 O5' C A 279 58.608 127.682 -1.075 1.00 87.49 O
ATOM 6 C5' C A 279 58.026 127.944 -2.365 1.00 86.13 C
ATOM 7 C4' C A 279 56.833 127.046 -2.594 1.00 85.21 C
ATOM 8 O4' C A 279 57.257 125.658 -2.590 1.00 84.84 O
ATOM 9 C3' C A 279 55.741 127.122 -1.538 1.00 84.76 C
ATOM 10 O3' C A 279 54.830 128.178 -1.824 1.00 85.32 O
ATOM 11 C2' C A 279 55.067 125.758 -1.641 1.00 83.56 C
ATOM 12 O2' C A 279 54.085 125.704 -2.655 1.00 81.95 O
ATOM 13 C1' C A 279 56.239 124.849 -2.022 1.00 83.58 C
ATOM 14 N1 C A 279 56.811 124.070 -0.901 1.00 82.88 N
ATOM 15 C2 C A 279 56.142 122.904 -0.468 1.00 82.01 C
ATOM 16 O2 C A 279 55.078 122.573 -1.016 1.00 81.42 O
ATOM 17 N3 C A 279 56.672 122.174 0.537 1.00 81.59 N
ATOM 18 C4 C A 279 57.810 122.560 1.115 1.00 83.02 C
ATOM 19 N4 C A 279 58.296 121.798 2.100 1.00 83.38 N
ATOM 20 C5 C A 279 58.503 123.743 0.709 1.00 82.98 C
ATOM 21 C6 C A 279 57.974 124.459 -0.291 1.00 82.60 C
ATOM 22 P G A 280 54.199 129.034 -0.621 1.00 85.30 P
ATOM 23 OP1 G A 280 53.224 129.982 -1.219 1.00 84.24 O
ATOM 24 OP2 G A 280 55.316 129.556 0.212 1.00 85.28 O
ATOM 25 O5' G A 280 53.395 127.952 0.230 1.00 85.78 O
TER

ATOM 1 O3' A B 348 53.410 113.182 4.823 1.00 93.84 O
ATOM 2 P C B 349 54.083 112.767 3.425 1.00 95.84 P
ATOM 3 OP1 C B 349 53.927 111.293 3.299 1.00 95.81 O
ATOM 4 OP2 C B 349 55.444 113.368 3.378 1.00 95.84 O
ATOM 5 O5' C B 349 53.170 113.478 2.324 1.00 95.29 O
ATOM 6 C5' C B 349 51.797 113.083 2.142 1.00 95.78 C
ATOM 7 C4' C B 349 51.086 114.021 1.190 1.00 96.97 C
ATOM 8 O4' C B 349 51.028 115.358 1.756 1.00 97.71 O
ATOM 9 C3' C B 349 51.699 114.220 -0.188 1.00 97.73 C
ATOM 10 O3' C B 349 51.347 113.173 -1.093 1.00 98.86 O
ATOM 11 C2' C B 349 51.110 115.561 -0.619 1.00 97.13 C
ATOM 12 O2' C B 349 49.802 115.437 -1.146 1.00 95.55 O
ATOM 13 C1' C B 349 51.039 116.318 0.710 1.00 97.15 C
ATOM 14 N1 C B 349 52.164 117.258 0.918 1.00 96.49 N
ATOM 15 C2 C B 349 52.052 118.573 0.415 1.00 96.04 C
ATOM 16 O2 C B 349 51.009 118.912 -0.173 1.00 94.81 O
ATOM 17 N3 C B 349 53.084 119.436 0.586 1.00 96.10 N
ATOM 18 C4 C B 349 54.187 119.040 1.232 1.00 96.37 C
ATOM 19 N4 C B 349 55.180 119.924 1.377 1.00 96.36 N
ATOM 20 C5 C B 349 54.322 117.718 1.759 1.00 96.22 C
ATOM 21 C6 C B 349 53.298 116.870 1.581 1.00 96.03 C
ATOM 22 P G B 350 52.373 112.747 -2.265 1.00 99.66 P
ATOM 23 OP1 G B 350 51.673 111.736 -3.100 1.00 98.97 O
ATOM 24 OP2 G B 350 53.686 112.402 -1.648 1.00 98.97 O
ATOM 25 O5' G B 350 52.549 114.080 -3.135 1.00 99.59 O
TER

Atoms:
C2: (56.142,122.904,-0.468)
OP1: (59.826,129.842,-0.773)
OP2: (60.401,127.785,0.658)
C4: (57.810,122.560,1.115)
O5': (58.608,127.682,-1.075)
C3': (55.741,127.122,-1.538)
C1': (56.239,124.849,-2.022)
O4': (57.257,125.658,-2.590)
C5': (58.026,127.944,-2.365)
P: (59.980,128.368,-0.645)
O2: (55.078,122.573,-1.016)
C4': (56.833,127.046,-2.594)
C2': (55.067,125.758,-1.641)
O2': (54.085,125.704,-2.655)
N1: (56.811,124.070,-0.901)
N3: (56.672,122.174,0.537)
N4: (58.296,121.798,2.100)
C6: (57.974,124.459,-0.291)
C5: (58.503,123.743,0.709)
O3': (54.830,128.178,-1.824)
C2: (52.052,118.573,0.415)
OP1: (53.927,111.293,3.299)
OP2: (55.444,113.368,3.378)
C4: (54.187,119.040,1.232)
O5': (53.170,113.478,2.324)
C3': (51.699,114.220,-0.188)
C1': (51.039,116.318,0.710)
O4': (51.028,115.358,1.756)
C5': (51.797,113.083,2.142)
P: (54.083,112.767,3.425)
O2: (51.009,118.912,-0.173)
C4': (51.086,114.021,1.190)
C2': (51.110,115.561,-0.619)
O2': (49.802,115.437,-1.146)
N1: (52.164,117.258,0.918)
N3: (53.084,119.436,0.586)
N4: (55.180,119.924,1.377)
C6: (53.298,116.870,1.581)
C5: (54.322,117.718,1.759)
O3': (51.347,113.173,-1.093)
Image (generated by PyMOL):
PyMOL image
show in jmol