ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0553:01052

Extra

PDB:
ATOM 1 O3' G A 552 -5.880 93.460 97.110 1.00 57.04 O
ATOM 2 P A A 553 -5.373 92.511 98.306 1.00 59.29 P
ATOM 3 OP1 A A 553 -5.956 91.163 98.073 1.00 56.41 O
ATOM 4 OP2 A A 553 -5.561 93.186 99.616 1.00 54.57 O
ATOM 5 O5' A A 553 -3.807 92.385 98.026 1.00 58.41 O
ATOM 6 C5' A A 553 -3.327 91.657 96.876 1.00 55.33 C
ATOM 7 C4' A A 553 -1.835 91.828 96.720 1.00 54.12 C
ATOM 8 O4' A A 553 -1.514 93.170 96.279 1.00 53.52 O
ATOM 9 C3' A A 553 -1.012 91.655 97.981 1.00 53.53 C
ATOM 10 O3' A A 553 -0.812 90.278 98.257 1.00 53.21 O
ATOM 11 C2' A A 553 0.281 92.366 97.612 1.00 51.08 C
ATOM 12 O2' A A 553 1.084 91.571 96.765 1.00 51.59 O
ATOM 13 C1' A A 553 -0.250 93.544 96.795 1.00 49.45 C
ATOM 14 N9 A A 553 -0.404 94.791 97.542 1.00 48.95 N
ATOM 15 C8 A A 553 -1.560 95.360 98.012 1.00 48.14 C
ATOM 16 N7 A A 553 -1.376 96.520 98.602 1.00 49.26 N
ATOM 17 C5 A A 553 -0.006 96.722 98.524 1.00 46.86 C
ATOM 18 C6 A A 553 0.822 97.779 98.945 1.00 46.13 C
ATOM 19 N6 A A 553 0.373 98.883 99.541 1.00 47.83 N
ATOM 20 N1 A A 553 2.145 97.668 98.721 1.00 45.47 N
ATOM 21 C2 A A 553 2.599 96.572 98.102 1.00 46.89 C
ATOM 22 N3 A A 553 1.925 95.520 97.645 1.00 47.30 N
ATOM 23 C4 A A 553 0.608 95.658 97.890 1.00 48.88 C
ATOM 24 P A A 554 -0.927 89.748 99.764 1.00 53.91 P
ATOM 25 OP1 A A 554 -1.184 88.280 99.669 1.00 51.16 O
ATOM 26 OP2 A A 554 -1.861 90.625 100.524 1.00 51.94 O
ATOM 27 O5' A A 554 0.522 89.991 100.377 1.00 53.38 O
TER

ATOM 1 O3' A B1051 5.914 105.142 97.778 1.00 54.66 O
ATOM 2 P G B1052 6.415 105.016 99.300 1.00 56.00 P
ATOM 3 OP1 G B1052 5.825 106.159 100.043 1.00 54.48 O
ATOM 4 OP2 G B1052 7.888 104.814 99.311 1.00 55.15 O
ATOM 5 O5' G B1052 5.758 103.653 99.811 1.00 55.74 O
ATOM 6 C5' G B1052 4.352 103.574 100.127 1.00 52.76 C
ATOM 7 C4' G B1052 3.967 102.159 100.509 1.00 51.52 C
ATOM 8 O4' G B1052 4.345 101.257 99.435 1.00 50.94 O
ATOM 9 C3' G B1052 4.622 101.535 101.733 1.00 50.26 C
ATOM 10 O3' G B1052 3.997 101.930 102.948 1.00 50.45 O
ATOM 11 C2' G B1052 4.380 100.057 101.474 1.00 51.63 C
ATOM 12 O2' G B1052 3.023 99.721 101.711 1.00 53.30 O
ATOM 13 C1' G B1052 4.646 99.973 99.969 1.00 49.96 C
ATOM 14 N9 G B1052 6.032 99.639 99.634 1.00 48.37 N
ATOM 15 C8 G B1052 7.027 100.519 99.273 1.00 47.01 C
ATOM 16 N7 G B1052 8.169 99.932 99.029 1.00 46.39 N
ATOM 17 C5 G B1052 7.920 98.584 99.239 1.00 45.15 C
ATOM 18 C6 G B1052 8.787 97.455 99.121 1.00 46.25 C
ATOM 19 O6 G B1052 9.973 97.421 98.779 1.00 42.98 O
ATOM 20 N1 G B1052 8.130 96.272 99.444 1.00 46.22 N
ATOM 21 C2 G B1052 6.816 96.178 99.820 1.00 45.95 C
ATOM 22 N2 G B1052 6.387 94.941 100.114 1.00 43.75 N
ATOM 23 N3 G B1052 5.989 97.218 99.911 1.00 45.41 N
ATOM 24 C4 G B1052 6.605 98.381 99.614 1.00 45.94 C
ATOM 25 P G B1053 4.799 101.806 104.345 1.00 52.85 P
ATOM 26 OP1 G B1053 3.811 102.094 105.419 1.00 52.99 O
ATOM 27 OP2 G B1053 6.042 102.613 104.263 1.00 54.16 O
ATOM 28 O5' G B1053 5.252 100.274 104.435 1.00 50.18 O
TER

Atoms:
OP1: (-5.956,91.163,98.073)
OP2: (-5.561,93.186,99.616)
C3': (-1.012,91.655,97.981)
C1': (-0.250,93.544,96.795)
C5': (-3.327,91.657,96.876)
O4': (-1.514,93.170,96.279)
C8: (-1.560,95.360,98.012)
O2': (1.084,91.571,96.765)
C6: (0.822,97.779,98.945)
C5: (-0.006,96.722,98.524)
C4: (0.608,95.658,97.890)
P: (-5.373,92.511,98.306)
C4': (-1.835,91.828,96.720)
C2': (0.281,92.366,97.612)
C2: (2.599,96.572,98.102)
N1: (2.145,97.668,98.721)
N3: (1.925,95.520,97.645)
N6: (0.373,98.883,99.541)
N7: (-1.376,96.520,98.602)
N9: (-0.404,94.791,97.542)
O5': (-3.807,92.385,98.026)
O3': (-0.812,90.278,98.257)
OP1: (5.825,106.159,100.043)
OP2: (7.888,104.814,99.311)
C3': (4.622,101.535,101.733)
C1': (4.646,99.973,99.969)
C5': (4.352,103.574,100.127)
O6: (9.973,97.421,98.779)
O4': (4.345,101.257,99.435)
C8: (7.027,100.519,99.273)
C2: (6.816,96.178,99.820)
C6: (8.787,97.455,99.121)
C5: (7.920,98.584,99.239)
C4: (6.605,98.381,99.614)
P: (6.415,105.016,99.300)
C4': (3.967,102.159,100.509)
C2': (4.380,100.057,101.474)
O2': (3.023,99.721,101.711)
N1: (8.130,96.272,99.444)
N2: (6.387,94.941,100.114)
N3: (5.989,97.218,99.911)
N7: (8.169,99.932,99.029)
N9: (6.032,99.639,99.634)
O5': (5.758,103.653,99.811)
O3': (3.997,101.930,102.948)
Image (generated by PyMOL):
PyMOL image
show in jmol