Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01888:02113
Extra
PDB:
ATOM 1 O3' G A1887 116.965 93.419 53.736 1.00 71.69 O
ATOM 2 P A A1888 116.872 94.357 55.051 1.00 69.51 P
ATOM 3 OP1 A A1888 118.208 94.987 55.232 1.00 68.01 O
ATOM 4 OP2 A A1888 116.261 93.613 56.182 1.00 68.71 O
ATOM 5 O5' A A1888 115.865 95.511 54.613 1.00 64.87 O
ATOM 6 C5' A A1888 116.289 96.538 53.702 1.00 58.90 C
ATOM 7 C4' A A1888 115.367 97.732 53.779 1.00 54.88 C
ATOM 8 O4' A A1888 114.107 97.447 53.119 1.00 53.65 O
ATOM 9 C3' A A1888 114.955 98.199 55.165 1.00 51.92 C
ATOM 10 O3' A A1888 115.985 98.962 55.782 1.00 49.17 O
ATOM 11 C2' A A1888 113.719 99.029 54.847 1.00 50.96 C
ATOM 12 O2' A A1888 114.049 100.282 54.284 1.00 51.15 O
ATOM 13 C1' A A1888 113.072 98.186 53.746 1.00 52.03 C
ATOM 14 N9 A A1888 112.064 97.247 54.235 1.00 52.09 N
ATOM 15 C8 A A1888 112.228 95.920 54.559 1.00 52.25 C
ATOM 16 N7 A A1888 111.122 95.328 54.940 1.00 52.20 N
ATOM 17 C5 A A1888 110.165 96.331 54.869 1.00 52.10 C
ATOM 18 C6 A A1888 108.786 96.341 55.136 1.00 51.23 C
ATOM 19 N6 A A1888 108.103 95.266 55.537 1.00 49.44 N
ATOM 20 N1 A A1888 108.124 97.508 54.974 1.00 51.70 N
ATOM 21 C2 A A1888 108.810 98.585 54.565 1.00 51.57 C
ATOM 22 N3 A A1888 110.103 98.699 54.275 1.00 52.53 N
ATOM 23 C4 A A1888 110.734 97.522 54.448 1.00 52.56 C
ATOM 24 P A A1889 116.166 98.923 57.380 1.00 48.98 P
ATOM 25 OP1 A A1889 117.431 99.644 57.672 1.00 48.90 O
ATOM 26 OP2 A A1889 115.979 97.540 57.884 1.00 47.27 O
ATOM 27 O5' A A1889 114.956 99.804 57.926 1.00 48.87 O
TER
ATOM 1 O3' A B2112 100.489 96.183 52.161 1.00 39.12 O
ATOM 2 P G B2113 99.787 96.481 53.577 1.00 41.60 P
ATOM 3 OP1 G B2113 99.000 95.256 53.905 1.00 41.06 O
ATOM 4 OP2 G B2113 99.107 97.801 53.540 1.00 42.26 O
ATOM 5 O5' G B2113 101.001 96.596 54.602 1.00 39.70 O
ATOM 6 C5' G B2113 101.776 95.437 54.959 1.00 38.62 C
ATOM 7 C4' G B2113 103.032 95.851 55.683 1.00 38.67 C
ATOM 8 O4' G B2113 103.823 96.704 54.818 1.00 36.47 O
ATOM 9 C3' G B2113 102.839 96.681 56.942 1.00 39.56 C
ATOM 10 O3' G B2113 102.581 95.857 58.070 1.00 42.88 O
ATOM 11 C2' G B2113 104.182 97.385 57.063 1.00 38.83 C
ATOM 12 O2' G B2113 105.191 96.532 57.570 1.00 40.32 O
ATOM 13 C1' G B2113 104.487 97.685 55.595 1.00 37.71 C
ATOM 14 N9 G B2113 104.027 99.007 55.173 1.00 37.01 N
ATOM 15 C8 G B2113 102.900 99.309 54.444 1.00 36.04 C
ATOM 16 N7 G B2113 102.767 100.587 54.215 1.00 36.95 N
ATOM 17 C5 G B2113 103.870 101.164 54.831 1.00 35.96 C
ATOM 18 C6 G B2113 104.267 102.519 54.919 1.00 35.37 C
ATOM 19 O6 G B2113 103.711 103.515 54.455 1.00 36.89 O
ATOM 20 N1 G B2113 105.446 102.659 55.635 1.00 34.82 N
ATOM 21 C2 G B2113 106.157 101.630 56.193 1.00 34.77 C
ATOM 22 N2 G B2113 107.284 101.969 56.834 1.00 33.85 N
ATOM 23 N3 G B2113 105.796 100.364 56.124 1.00 34.03 N
ATOM 24 C4 G B2113 104.653 100.204 55.430 1.00 35.12 C
ATOM 25 P C B2114 101.819 96.463 59.348 1.00 44.99 P
ATOM 26 OP1 C B2114 101.635 95.328 60.291 1.00 45.85 O
ATOM 27 OP2 C B2114 100.632 97.225 58.879 1.00 45.55 O
ATOM 28 O5' C B2114 102.852 97.499 59.977 1.00 41.84 O
TER
ATOM 2 P A A1888 116.872 94.357 55.051 1.00 69.51 P
ATOM 3 OP1 A A1888 118.208 94.987 55.232 1.00 68.01 O
ATOM 4 OP2 A A1888 116.261 93.613 56.182 1.00 68.71 O
ATOM 5 O5' A A1888 115.865 95.511 54.613 1.00 64.87 O
ATOM 6 C5' A A1888 116.289 96.538 53.702 1.00 58.90 C
ATOM 7 C4' A A1888 115.367 97.732 53.779 1.00 54.88 C
ATOM 8 O4' A A1888 114.107 97.447 53.119 1.00 53.65 O
ATOM 9 C3' A A1888 114.955 98.199 55.165 1.00 51.92 C
ATOM 10 O3' A A1888 115.985 98.962 55.782 1.00 49.17 O
ATOM 11 C2' A A1888 113.719 99.029 54.847 1.00 50.96 C
ATOM 12 O2' A A1888 114.049 100.282 54.284 1.00 51.15 O
ATOM 13 C1' A A1888 113.072 98.186 53.746 1.00 52.03 C
ATOM 14 N9 A A1888 112.064 97.247 54.235 1.00 52.09 N
ATOM 15 C8 A A1888 112.228 95.920 54.559 1.00 52.25 C
ATOM 16 N7 A A1888 111.122 95.328 54.940 1.00 52.20 N
ATOM 17 C5 A A1888 110.165 96.331 54.869 1.00 52.10 C
ATOM 18 C6 A A1888 108.786 96.341 55.136 1.00 51.23 C
ATOM 19 N6 A A1888 108.103 95.266 55.537 1.00 49.44 N
ATOM 20 N1 A A1888 108.124 97.508 54.974 1.00 51.70 N
ATOM 21 C2 A A1888 108.810 98.585 54.565 1.00 51.57 C
ATOM 22 N3 A A1888 110.103 98.699 54.275 1.00 52.53 N
ATOM 23 C4 A A1888 110.734 97.522 54.448 1.00 52.56 C
ATOM 24 P A A1889 116.166 98.923 57.380 1.00 48.98 P
ATOM 25 OP1 A A1889 117.431 99.644 57.672 1.00 48.90 O
ATOM 26 OP2 A A1889 115.979 97.540 57.884 1.00 47.27 O
ATOM 27 O5' A A1889 114.956 99.804 57.926 1.00 48.87 O
TER
ATOM 1 O3' A B2112 100.489 96.183 52.161 1.00 39.12 O
ATOM 2 P G B2113 99.787 96.481 53.577 1.00 41.60 P
ATOM 3 OP1 G B2113 99.000 95.256 53.905 1.00 41.06 O
ATOM 4 OP2 G B2113 99.107 97.801 53.540 1.00 42.26 O
ATOM 5 O5' G B2113 101.001 96.596 54.602 1.00 39.70 O
ATOM 6 C5' G B2113 101.776 95.437 54.959 1.00 38.62 C
ATOM 7 C4' G B2113 103.032 95.851 55.683 1.00 38.67 C
ATOM 8 O4' G B2113 103.823 96.704 54.818 1.00 36.47 O
ATOM 9 C3' G B2113 102.839 96.681 56.942 1.00 39.56 C
ATOM 10 O3' G B2113 102.581 95.857 58.070 1.00 42.88 O
ATOM 11 C2' G B2113 104.182 97.385 57.063 1.00 38.83 C
ATOM 12 O2' G B2113 105.191 96.532 57.570 1.00 40.32 O
ATOM 13 C1' G B2113 104.487 97.685 55.595 1.00 37.71 C
ATOM 14 N9 G B2113 104.027 99.007 55.173 1.00 37.01 N
ATOM 15 C8 G B2113 102.900 99.309 54.444 1.00 36.04 C
ATOM 16 N7 G B2113 102.767 100.587 54.215 1.00 36.95 N
ATOM 17 C5 G B2113 103.870 101.164 54.831 1.00 35.96 C
ATOM 18 C6 G B2113 104.267 102.519 54.919 1.00 35.37 C
ATOM 19 O6 G B2113 103.711 103.515 54.455 1.00 36.89 O
ATOM 20 N1 G B2113 105.446 102.659 55.635 1.00 34.82 N
ATOM 21 C2 G B2113 106.157 101.630 56.193 1.00 34.77 C
ATOM 22 N2 G B2113 107.284 101.969 56.834 1.00 33.85 N
ATOM 23 N3 G B2113 105.796 100.364 56.124 1.00 34.03 N
ATOM 24 C4 G B2113 104.653 100.204 55.430 1.00 35.12 C
ATOM 25 P C B2114 101.819 96.463 59.348 1.00 44.99 P
ATOM 26 OP1 C B2114 101.635 95.328 60.291 1.00 45.85 O
ATOM 27 OP2 C B2114 100.632 97.225 58.879 1.00 45.55 O
ATOM 28 O5' C B2114 102.852 97.499 59.977 1.00 41.84 O
TER
Atoms:
OP1: (118.208,94.987,55.232)
OP2: (116.261,93.613,56.182)
C3': (114.955,98.199,55.165)
C1': (113.072,98.186,53.746)
C5': (116.289,96.538,53.702)
O4': (114.107,97.447,53.119)
C8: (112.228,95.920,54.559)
O2': (114.049,100.282,54.284)
C6: (108.786,96.341,55.136)
C5: (110.165,96.331,54.869)
C4: (110.734,97.522,54.448)
P: (116.872,94.357,55.051)
C4': (115.367,97.732,53.779)
C2': (113.719,99.029,54.847)
C2: (108.810,98.585,54.565)
N1: (108.124,97.508,54.974)
N3: (110.103,98.699,54.275)
N6: (108.103,95.266,55.537)
N7: (111.122,95.328,54.940)
N9: (112.064,97.247,54.235)
O5': (115.865,95.511,54.613)
O3': (115.985,98.962,55.782)
OP2: (116.261,93.613,56.182)
C3': (114.955,98.199,55.165)
C1': (113.072,98.186,53.746)
C5': (116.289,96.538,53.702)
O4': (114.107,97.447,53.119)
C8: (112.228,95.920,54.559)
O2': (114.049,100.282,54.284)
C6: (108.786,96.341,55.136)
C5: (110.165,96.331,54.869)
C4: (110.734,97.522,54.448)
P: (116.872,94.357,55.051)
C4': (115.367,97.732,53.779)
C2': (113.719,99.029,54.847)
C2: (108.810,98.585,54.565)
N1: (108.124,97.508,54.974)
N3: (110.103,98.699,54.275)
N6: (108.103,95.266,55.537)
N7: (111.122,95.328,54.940)
N9: (112.064,97.247,54.235)
O5': (115.865,95.511,54.613)
O3': (115.985,98.962,55.782)
OP1: (99.000,95.256,53.905)
OP2: (99.107,97.801,53.540)
C3': (102.839,96.681,56.942)
C1': (104.487,97.685,55.595)
C5': (101.776,95.437,54.959)
O6: (103.711,103.515,54.455)
O4': (103.823,96.704,54.818)
C8: (102.900,99.309,54.444)
C2: (106.157,101.630,56.193)
C6: (104.267,102.519,54.919)
C5: (103.870,101.164,54.831)
C4: (104.653,100.204,55.430)
P: (99.787,96.481,53.577)
C4': (103.032,95.851,55.683)
C2': (104.182,97.385,57.063)
O2': (105.191,96.532,57.570)
N1: (105.446,102.659,55.635)
N2: (107.284,101.969,56.834)
N3: (105.796,100.364,56.124)
N7: (102.767,100.587,54.215)
N9: (104.027,99.007,55.173)
O5': (101.001,96.596,54.602)
O3': (102.581,95.857,58.070)
OP2: (99.107,97.801,53.540)
C3': (102.839,96.681,56.942)
C1': (104.487,97.685,55.595)
C5': (101.776,95.437,54.959)
O6: (103.711,103.515,54.455)
O4': (103.823,96.704,54.818)
C8: (102.900,99.309,54.444)
C2: (106.157,101.630,56.193)
C6: (104.267,102.519,54.919)
C5: (103.870,101.164,54.831)
C4: (104.653,100.204,55.430)
P: (99.787,96.481,53.577)
C4': (103.032,95.851,55.683)
C2': (104.182,97.385,57.063)
O2': (105.191,96.532,57.570)
N1: (105.446,102.659,55.635)
N2: (107.284,101.969,56.834)
N3: (105.796,100.364,56.124)
N7: (102.767,100.587,54.215)
N9: (104.027,99.007,55.173)
O5': (101.001,96.596,54.602)
O3': (102.581,95.857,58.070)
Image (generated by PyMOL):