Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01888:02113
Extra
PDB:
ATOM 1 O3' G A1887 116.968 94.060 54.024 1.00 79.07 O
ATOM 2 P A A1888 116.765 94.967 55.347 1.00 76.32 P
ATOM 3 OP1 A A1888 118.068 95.626 55.634 1.00 75.90 O
ATOM 4 OP2 A A1888 116.106 94.176 56.411 1.00 75.42 O
ATOM 5 O5' A A1888 115.753 96.102 54.871 1.00 73.15 O
ATOM 6 C5' A A1888 116.182 97.119 53.944 1.00 68.42 C
ATOM 7 C4' A A1888 115.264 98.318 54.002 1.00 65.28 C
ATOM 8 O4' A A1888 114.012 98.028 53.334 1.00 64.49 O
ATOM 9 C3' A A1888 114.843 98.796 55.381 1.00 63.75 C
ATOM 10 O3' A A1888 115.861 99.570 56.002 1.00 62.09 O
ATOM 11 C2' A A1888 113.598 99.611 55.057 1.00 63.62 C
ATOM 12 O2' A A1888 113.905 100.880 54.518 1.00 64.04 O
ATOM 13 C1' A A1888 112.969 98.764 53.949 1.00 63.96 C
ATOM 14 N9 A A1888 111.963 97.820 54.434 1.00 64.45 N
ATOM 15 C8 A A1888 112.123 96.489 54.746 1.00 64.59 C
ATOM 16 N7 A A1888 111.017 95.900 55.135 1.00 64.78 N
ATOM 17 C5 A A1888 110.067 96.911 55.082 1.00 64.17 C
ATOM 18 C6 A A1888 108.695 96.931 55.369 1.00 63.99 C
ATOM 19 N6 A A1888 108.011 95.864 55.789 1.00 63.81 N
ATOM 20 N1 A A1888 108.039 98.101 55.211 1.00 64.16 N
ATOM 21 C2 A A1888 108.725 99.171 54.794 1.00 63.57 C
ATOM 22 N3 A A1888 110.012 99.279 54.494 1.00 64.02 N
ATOM 23 C4 A A1888 110.637 98.099 54.659 1.00 64.52 C
ATOM 24 P A A1889 116.093 99.458 57.589 1.00 62.53 P
ATOM 25 OP1 A A1889 117.429 100.042 57.891 1.00 61.60 O
ATOM 26 OP2 A A1889 115.786 98.073 58.025 1.00 62.22 O
ATOM 27 O5' A A1889 114.969 100.406 58.205 1.00 61.86 O
TER
ATOM 1 O3' A B2112 100.384 96.755 52.339 1.00 52.37 O
ATOM 2 P G B2113 99.721 97.051 53.773 1.00 53.86 P
ATOM 3 OP1 G B2113 98.916 95.844 54.109 1.00 52.59 O
ATOM 4 OP2 G B2113 99.070 98.384 53.753 1.00 53.42 O
ATOM 5 O5' G B2113 100.962 97.161 54.766 1.00 51.98 O
ATOM 6 C5' G B2113 101.717 96.000 55.149 1.00 50.12 C
ATOM 7 C4' G B2113 102.967 96.414 55.880 1.00 48.94 C
ATOM 8 O4' G B2113 103.743 97.272 55.006 1.00 47.25 O
ATOM 9 C3' G B2113 102.765 97.266 57.122 1.00 50.38 C
ATOM 10 O3' G B2113 102.472 96.493 58.277 1.00 52.63 O
ATOM 11 C2' G B2113 104.107 97.970 57.245 1.00 50.52 C
ATOM 12 O2' G B2113 105.109 97.120 57.770 1.00 52.21 O
ATOM 13 C1' G B2113 104.420 98.254 55.777 1.00 48.46 C
ATOM 14 N9 G B2113 103.997 99.580 55.330 1.00 46.61 N
ATOM 15 C8 G B2113 102.905 99.893 54.555 1.00 46.69 C
ATOM 16 N7 G B2113 102.804 101.171 54.303 1.00 46.71 N
ATOM 17 C5 G B2113 103.890 101.738 54.955 1.00 46.75 C
ATOM 18 C6 G B2113 104.308 103.095 55.042 1.00 47.69 C
ATOM 19 O6 G B2113 103.791 104.099 54.531 1.00 49.29 O
ATOM 20 N1 G B2113 105.456 103.227 55.813 1.00 47.06 N
ATOM 21 C2 G B2113 106.124 102.193 56.415 1.00 47.16 C
ATOM 22 N2 G B2113 107.222 102.529 57.115 1.00 47.17 N
ATOM 23 N3 G B2113 105.751 100.925 56.339 1.00 45.75 N
ATOM 24 C4 G B2113 104.634 100.772 55.599 1.00 46.38 C
ATOM 25 P C B2114 101.703 97.174 59.515 1.00 54.12 P
ATOM 26 OP1 C B2114 101.424 96.112 60.512 1.00 54.63 O
ATOM 27 OP2 C B2114 100.576 97.971 58.959 1.00 55.16 O
ATOM 28 O5' C B2114 102.767 98.183 60.137 1.00 51.56 O
TER
ATOM 2 P A A1888 116.765 94.967 55.347 1.00 76.32 P
ATOM 3 OP1 A A1888 118.068 95.626 55.634 1.00 75.90 O
ATOM 4 OP2 A A1888 116.106 94.176 56.411 1.00 75.42 O
ATOM 5 O5' A A1888 115.753 96.102 54.871 1.00 73.15 O
ATOM 6 C5' A A1888 116.182 97.119 53.944 1.00 68.42 C
ATOM 7 C4' A A1888 115.264 98.318 54.002 1.00 65.28 C
ATOM 8 O4' A A1888 114.012 98.028 53.334 1.00 64.49 O
ATOM 9 C3' A A1888 114.843 98.796 55.381 1.00 63.75 C
ATOM 10 O3' A A1888 115.861 99.570 56.002 1.00 62.09 O
ATOM 11 C2' A A1888 113.598 99.611 55.057 1.00 63.62 C
ATOM 12 O2' A A1888 113.905 100.880 54.518 1.00 64.04 O
ATOM 13 C1' A A1888 112.969 98.764 53.949 1.00 63.96 C
ATOM 14 N9 A A1888 111.963 97.820 54.434 1.00 64.45 N
ATOM 15 C8 A A1888 112.123 96.489 54.746 1.00 64.59 C
ATOM 16 N7 A A1888 111.017 95.900 55.135 1.00 64.78 N
ATOM 17 C5 A A1888 110.067 96.911 55.082 1.00 64.17 C
ATOM 18 C6 A A1888 108.695 96.931 55.369 1.00 63.99 C
ATOM 19 N6 A A1888 108.011 95.864 55.789 1.00 63.81 N
ATOM 20 N1 A A1888 108.039 98.101 55.211 1.00 64.16 N
ATOM 21 C2 A A1888 108.725 99.171 54.794 1.00 63.57 C
ATOM 22 N3 A A1888 110.012 99.279 54.494 1.00 64.02 N
ATOM 23 C4 A A1888 110.637 98.099 54.659 1.00 64.52 C
ATOM 24 P A A1889 116.093 99.458 57.589 1.00 62.53 P
ATOM 25 OP1 A A1889 117.429 100.042 57.891 1.00 61.60 O
ATOM 26 OP2 A A1889 115.786 98.073 58.025 1.00 62.22 O
ATOM 27 O5' A A1889 114.969 100.406 58.205 1.00 61.86 O
TER
ATOM 1 O3' A B2112 100.384 96.755 52.339 1.00 52.37 O
ATOM 2 P G B2113 99.721 97.051 53.773 1.00 53.86 P
ATOM 3 OP1 G B2113 98.916 95.844 54.109 1.00 52.59 O
ATOM 4 OP2 G B2113 99.070 98.384 53.753 1.00 53.42 O
ATOM 5 O5' G B2113 100.962 97.161 54.766 1.00 51.98 O
ATOM 6 C5' G B2113 101.717 96.000 55.149 1.00 50.12 C
ATOM 7 C4' G B2113 102.967 96.414 55.880 1.00 48.94 C
ATOM 8 O4' G B2113 103.743 97.272 55.006 1.00 47.25 O
ATOM 9 C3' G B2113 102.765 97.266 57.122 1.00 50.38 C
ATOM 10 O3' G B2113 102.472 96.493 58.277 1.00 52.63 O
ATOM 11 C2' G B2113 104.107 97.970 57.245 1.00 50.52 C
ATOM 12 O2' G B2113 105.109 97.120 57.770 1.00 52.21 O
ATOM 13 C1' G B2113 104.420 98.254 55.777 1.00 48.46 C
ATOM 14 N9 G B2113 103.997 99.580 55.330 1.00 46.61 N
ATOM 15 C8 G B2113 102.905 99.893 54.555 1.00 46.69 C
ATOM 16 N7 G B2113 102.804 101.171 54.303 1.00 46.71 N
ATOM 17 C5 G B2113 103.890 101.738 54.955 1.00 46.75 C
ATOM 18 C6 G B2113 104.308 103.095 55.042 1.00 47.69 C
ATOM 19 O6 G B2113 103.791 104.099 54.531 1.00 49.29 O
ATOM 20 N1 G B2113 105.456 103.227 55.813 1.00 47.06 N
ATOM 21 C2 G B2113 106.124 102.193 56.415 1.00 47.16 C
ATOM 22 N2 G B2113 107.222 102.529 57.115 1.00 47.17 N
ATOM 23 N3 G B2113 105.751 100.925 56.339 1.00 45.75 N
ATOM 24 C4 G B2113 104.634 100.772 55.599 1.00 46.38 C
ATOM 25 P C B2114 101.703 97.174 59.515 1.00 54.12 P
ATOM 26 OP1 C B2114 101.424 96.112 60.512 1.00 54.63 O
ATOM 27 OP2 C B2114 100.576 97.971 58.959 1.00 55.16 O
ATOM 28 O5' C B2114 102.767 98.183 60.137 1.00 51.56 O
TER
Atoms:
OP1: (118.068,95.626,55.634)
OP2: (116.106,94.176,56.411)
C3': (114.843,98.796,55.381)
C1': (112.969,98.764,53.949)
C5': (116.182,97.119,53.944)
O4': (114.012,98.028,53.334)
C8: (112.123,96.489,54.746)
O2': (113.905,100.880,54.518)
C6: (108.695,96.931,55.369)
C5: (110.067,96.911,55.082)
C4: (110.637,98.099,54.659)
P: (116.765,94.967,55.347)
C4': (115.264,98.318,54.002)
C2': (113.598,99.611,55.057)
C2: (108.725,99.171,54.794)
N1: (108.039,98.101,55.211)
N3: (110.012,99.279,54.494)
N6: (108.011,95.864,55.789)
N7: (111.017,95.900,55.135)
N9: (111.963,97.820,54.434)
O5': (115.753,96.102,54.871)
O3': (115.861,99.570,56.002)
OP2: (116.106,94.176,56.411)
C3': (114.843,98.796,55.381)
C1': (112.969,98.764,53.949)
C5': (116.182,97.119,53.944)
O4': (114.012,98.028,53.334)
C8: (112.123,96.489,54.746)
O2': (113.905,100.880,54.518)
C6: (108.695,96.931,55.369)
C5: (110.067,96.911,55.082)
C4: (110.637,98.099,54.659)
P: (116.765,94.967,55.347)
C4': (115.264,98.318,54.002)
C2': (113.598,99.611,55.057)
C2: (108.725,99.171,54.794)
N1: (108.039,98.101,55.211)
N3: (110.012,99.279,54.494)
N6: (108.011,95.864,55.789)
N7: (111.017,95.900,55.135)
N9: (111.963,97.820,54.434)
O5': (115.753,96.102,54.871)
O3': (115.861,99.570,56.002)
OP1: (98.916,95.844,54.109)
OP2: (99.070,98.384,53.753)
C3': (102.765,97.266,57.122)
C1': (104.420,98.254,55.777)
C5': (101.717,96.000,55.149)
O6: (103.791,104.099,54.531)
O4': (103.743,97.272,55.006)
C8: (102.905,99.893,54.555)
C2: (106.124,102.193,56.415)
C6: (104.308,103.095,55.042)
C5: (103.890,101.738,54.955)
C4: (104.634,100.772,55.599)
P: (99.721,97.051,53.773)
C4': (102.967,96.414,55.880)
C2': (104.107,97.970,57.245)
O2': (105.109,97.120,57.770)
N1: (105.456,103.227,55.813)
N2: (107.222,102.529,57.115)
N3: (105.751,100.925,56.339)
N7: (102.804,101.171,54.303)
N9: (103.997,99.580,55.330)
O5': (100.962,97.161,54.766)
O3': (102.472,96.493,58.277)
OP2: (99.070,98.384,53.753)
C3': (102.765,97.266,57.122)
C1': (104.420,98.254,55.777)
C5': (101.717,96.000,55.149)
O6: (103.791,104.099,54.531)
O4': (103.743,97.272,55.006)
C8: (102.905,99.893,54.555)
C2: (106.124,102.193,56.415)
C6: (104.308,103.095,55.042)
C5: (103.890,101.738,54.955)
C4: (104.634,100.772,55.599)
P: (99.721,97.051,53.773)
C4': (102.967,96.414,55.880)
C2': (104.107,97.970,57.245)
O2': (105.109,97.120,57.770)
N1: (105.456,103.227,55.813)
N2: (107.222,102.529,57.115)
N3: (105.751,100.925,56.339)
N7: (102.804,101.171,54.303)
N9: (103.997,99.580,55.330)
O5': (100.962,97.161,54.766)
O3': (102.472,96.493,58.277)
Image (generated by PyMOL):