ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01903:01914

Extra

PDB:
ATOM 1 O3' G A1902 105.674 109.885 89.705 1.00 48.88 O
ATOM 2 P G A1903 106.036 110.045 91.259 1.00 50.42 P
ATOM 3 OP1 G A1903 104.769 109.830 92.009 1.00 50.69 O
ATOM 4 OP2 G A1903 106.810 111.299 91.475 1.00 48.73 O
ATOM 5 O5' G A1903 107.004 108.814 91.529 1.00 49.68 O
ATOM 6 C5' G A1903 106.555 107.464 91.358 1.00 49.14 C
ATOM 7 C4' G A1903 107.663 106.510 91.721 1.00 52.29 C
ATOM 8 O4' G A1903 108.747 106.630 90.759 1.00 52.27 O
ATOM 9 C3' G A1903 108.324 106.793 93.059 1.00 53.30 C
ATOM 10 O3' G A1903 107.594 106.245 94.142 1.00 56.18 O
ATOM 11 C2' G A1903 109.688 106.150 92.880 1.00 54.07 C
ATOM 12 O2' G A1903 109.632 104.744 92.997 1.00 54.87 O
ATOM 13 C1' G A1903 109.992 106.517 91.427 1.00 54.11 C
ATOM 14 N9 G A1903 110.685 107.797 91.317 1.00 56.21 N
ATOM 15 C8 G A1903 110.152 108.999 90.912 1.00 56.91 C
ATOM 16 N7 G A1903 111.020 109.972 90.922 1.00 58.43 N
ATOM 17 C5 G A1903 112.198 109.380 91.363 1.00 57.90 C
ATOM 18 C6 G A1903 113.481 109.940 91.582 1.00 58.12 C
ATOM 19 O6 G A1903 113.847 111.108 91.423 1.00 59.95 O
ATOM 20 N1 G A1903 114.385 108.986 92.030 1.00 56.62 N
ATOM 21 C2 G A1903 114.096 107.665 92.238 1.00 57.09 C
ATOM 22 N2 G A1903 115.105 106.904 92.671 1.00 58.08 N
ATOM 23 N3 G A1903 112.907 107.129 92.039 1.00 56.24 N
ATOM 24 C4 G A1903 112.010 108.038 91.606 1.00 56.91 C
ATOM 25 P C A1904 107.586 107.002 95.554 1.00 59.34 P
ATOM 26 OP1 C A1904 106.665 106.270 96.459 1.00 60.20 O
ATOM 27 OP2 C A1904 107.368 108.450 95.304 1.00 59.79 O
ATOM 28 O5' C A1904 109.070 106.803 96.092 1.00 61.06 O
TER

ATOM 1 O3' U B1913 112.497 95.845 89.263 1.00 87.42 O
ATOM 2 P A B1914 114.029 95.387 89.097 1.00 83.18 P
ATOM 3 OP1 A B1914 114.189 94.780 87.746 1.00 81.93 O
ATOM 4 OP2 A B1914 114.395 94.605 90.312 1.00 82.66 O
ATOM 5 O5' A B1914 114.834 96.763 89.132 1.00 80.26 O
ATOM 6 C5' A B1914 116.124 96.895 88.501 1.00 75.23 C
ATOM 7 C4' A B1914 116.653 98.298 88.689 1.00 71.49 C
ATOM 8 O4' A B1914 115.725 99.239 88.090 1.00 70.52 O
ATOM 9 C3' A B1914 116.773 98.754 90.133 1.00 69.66 C
ATOM 10 O3' A B1914 118.010 98.332 90.697 1.00 68.54 O
ATOM 11 C2' A B1914 116.674 100.269 90.013 1.00 68.63 C
ATOM 12 O2' A B1914 117.892 100.861 89.610 1.00 66.67 O
ATOM 13 C1' A B1914 115.654 100.414 88.880 1.00 68.89 C
ATOM 14 N9 A B1914 114.263 100.594 89.306 1.00 67.87 N
ATOM 15 C8 A B1914 113.289 99.633 89.421 1.00 68.15 C
ATOM 16 N7 A B1914 112.119 100.103 89.780 1.00 67.18 N
ATOM 17 C5 A B1914 112.339 101.464 89.921 1.00 67.69 C
ATOM 18 C6 A B1914 111.489 102.525 90.276 1.00 68.20 C
ATOM 19 N6 A B1914 110.188 102.376 90.543 1.00 68.33 N
ATOM 20 N1 A B1914 112.026 103.762 90.342 1.00 66.99 N
ATOM 21 C2 A B1914 113.325 103.912 90.059 1.00 66.52 C
ATOM 22 N3 A B1914 114.220 102.997 89.703 1.00 66.52 N
ATOM 23 C4 A B1914 113.658 101.779 89.649 1.00 67.33 C
ATOM 24 P A B1915 118.114 98.053 92.277 1.00 68.68 P
ATOM 25 OP1 A B1915 119.414 97.368 92.536 1.00 67.46 O
ATOM 26 OP2 A B1915 116.839 97.412 92.712 1.00 66.93 O
ATOM 27 O5' A B1915 118.179 99.504 92.934 1.00 66.81 O
TER

Atoms:
OP1: (104.769,109.830,92.009)
OP2: (106.810,111.299,91.475)
C3': (108.324,106.793,93.059)
C1': (109.992,106.517,91.427)
C5': (106.555,107.464,91.358)
O6: (113.847,111.108,91.423)
O4': (108.747,106.630,90.759)
C8: (110.152,108.999,90.912)
C2: (114.096,107.665,92.238)
C6: (113.481,109.940,91.582)
C5: (112.198,109.380,91.363)
C4: (112.010,108.038,91.606)
P: (106.036,110.045,91.259)
C4': (107.663,106.510,91.721)
C2': (109.688,106.150,92.880)
O2': (109.632,104.744,92.997)
N1: (114.385,108.986,92.030)
N2: (115.105,106.904,92.671)
N3: (112.907,107.129,92.039)
N7: (111.020,109.972,90.922)
N9: (110.685,107.797,91.317)
O5': (107.004,108.814,91.529)
O3': (107.594,106.245,94.142)
OP1: (114.189,94.780,87.746)
OP2: (114.395,94.605,90.312)
C3': (116.773,98.754,90.133)
C1': (115.654,100.414,88.880)
C5': (116.124,96.895,88.501)
O4': (115.725,99.239,88.090)
C8: (113.289,99.633,89.421)
O2': (117.892,100.861,89.610)
C6: (111.489,102.525,90.276)
C5: (112.339,101.464,89.921)
C4: (113.658,101.779,89.649)
P: (114.029,95.387,89.097)
C4': (116.653,98.298,88.689)
C2': (116.674,100.269,90.013)
C2: (113.325,103.912,90.059)
N1: (112.026,103.762,90.342)
N3: (114.220,102.997,89.703)
N6: (110.188,102.376,90.543)
N7: (112.119,100.103,89.780)
N9: (114.263,100.594,89.306)
O5': (114.834,96.763,89.132)
O3': (118.010,98.332,90.697)
Image (generated by PyMOL):
PyMOL image
show in jmol