Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01888:02113
Extra
PDB:
ATOM 1 O3' G A1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 2 P A A1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 3 OP1 A A1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 4 OP2 A A1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 5 O5' A A1888 115.659 96.261 54.879 1.00 69.42 O
ATOM 6 C5' A A1888 116.083 97.280 53.951 1.00 64.33 C
ATOM 7 C4' A A1888 115.173 98.486 54.023 1.00 60.58 C
ATOM 8 O4' A A1888 113.916 98.220 53.354 1.00 60.58 O
ATOM 9 C3' A A1888 114.762 98.950 55.406 1.00 59.38 C
ATOM 10 O3' A A1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 11 C2' A A1888 113.526 99.786 55.098 1.00 59.09 C
ATOM 12 O2' A A1888 113.846 101.061 54.582 1.00 60.75 O
ATOM 13 C1' A A1888 112.885 98.969 53.975 1.00 59.78 C
ATOM 14 N9 A A1888 111.854 98.044 54.441 1.00 60.21 N
ATOM 15 C8 A A1888 111.984 96.716 54.770 1.00 60.93 C
ATOM 16 N7 A A1888 110.862 96.153 55.153 1.00 61.34 N
ATOM 17 C5 A A1888 109.932 97.179 55.074 1.00 60.52 C
ATOM 18 C6 A A1888 108.558 97.231 55.348 1.00 60.15 C
ATOM 19 N6 A A1888 107.849 96.188 55.789 1.00 59.20 N
ATOM 20 N1 A A1888 107.927 98.408 55.158 1.00 60.63 N
ATOM 21 C2 A A1888 108.638 99.457 54.728 1.00 59.81 C
ATOM 22 N3 A A1888 109.929 99.536 54.442 1.00 60.02 N
ATOM 23 C4 A A1888 110.529 98.349 54.637 1.00 60.55 C
ATOM 24 P A A1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 25 OP1 A A1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 26 OP2 A A1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 27 O5' A A1889 114.838 100.576 58.175 1.00 57.04 O
TER
ATOM 1 O3' A B2112 100.257 96.968 52.350 1.00 47.24 O
ATOM 2 P G B2113 99.635 97.297 53.793 1.00 48.43 P
ATOM 3 OP1 G B2113 98.819 96.105 54.158 1.00 48.05 O
ATOM 4 OP2 G B2113 99.004 98.640 53.782 1.00 48.17 O
ATOM 5 O5' G B2113 100.901 97.385 54.756 1.00 47.19 O
ATOM 6 C5' G B2113 101.626 96.203 55.144 1.00 46.38 C
ATOM 7 C4' G B2113 102.877 96.587 55.886 1.00 45.12 C
ATOM 8 O4' G B2113 103.677 97.430 55.022 1.00 44.08 O
ATOM 9 C3' G B2113 102.668 97.443 57.123 1.00 46.11 C
ATOM 10 O3' G B2113 102.358 96.672 58.272 1.00 47.02 O
ATOM 11 C2' G B2113 104.010 98.141 57.262 1.00 45.88 C
ATOM 12 O2' G B2113 104.997 97.291 57.805 1.00 47.83 O
ATOM 13 C1' G B2113 104.344 98.415 55.798 1.00 45.63 C
ATOM 14 N9 G B2113 103.918 99.740 55.350 1.00 45.39 N
ATOM 15 C8 G B2113 102.816 100.054 54.589 1.00 44.29 C
ATOM 16 N7 G B2113 102.713 101.332 54.339 1.00 45.29 N
ATOM 17 C5 G B2113 103.809 101.898 54.977 1.00 45.83 C
ATOM 18 C6 G B2113 104.230 103.254 55.059 1.00 46.69 C
ATOM 19 O6 G B2113 103.704 104.257 54.564 1.00 47.93 O
ATOM 20 N1 G B2113 105.391 103.383 55.811 1.00 46.45 N
ATOM 21 C2 G B2113 106.066 102.348 56.407 1.00 46.57 C
ATOM 22 N2 G B2113 107.173 102.683 57.094 1.00 46.48 N
ATOM 23 N3 G B2113 105.687 101.080 56.337 1.00 44.89 N
ATOM 24 C4 G B2113 104.560 100.930 55.611 1.00 45.44 C
ATOM 25 P C B2114 101.643 97.376 59.525 1.00 48.21 P
ATOM 26 OP1 C B2114 101.389 96.332 60.546 1.00 50.00 O
ATOM 27 OP2 C B2114 100.506 98.180 58.997 1.00 49.62 O
ATOM 28 O5' C B2114 102.735 98.385 60.092 1.00 46.49 O
TER
ATOM 2 P A A1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 3 OP1 A A1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 4 OP2 A A1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 5 O5' A A1888 115.659 96.261 54.879 1.00 69.42 O
ATOM 6 C5' A A1888 116.083 97.280 53.951 1.00 64.33 C
ATOM 7 C4' A A1888 115.173 98.486 54.023 1.00 60.58 C
ATOM 8 O4' A A1888 113.916 98.220 53.354 1.00 60.58 O
ATOM 9 C3' A A1888 114.762 98.950 55.406 1.00 59.38 C
ATOM 10 O3' A A1888 115.797 99.704 56.018 1.00 57.86 O
ATOM 11 C2' A A1888 113.526 99.786 55.098 1.00 59.09 C
ATOM 12 O2' A A1888 113.846 101.061 54.582 1.00 60.75 O
ATOM 13 C1' A A1888 112.885 98.969 53.975 1.00 59.78 C
ATOM 14 N9 A A1888 111.854 98.044 54.441 1.00 60.21 N
ATOM 15 C8 A A1888 111.984 96.716 54.770 1.00 60.93 C
ATOM 16 N7 A A1888 110.862 96.153 55.153 1.00 61.34 N
ATOM 17 C5 A A1888 109.932 97.179 55.074 1.00 60.52 C
ATOM 18 C6 A A1888 108.558 97.231 55.348 1.00 60.15 C
ATOM 19 N6 A A1888 107.849 96.188 55.789 1.00 59.20 N
ATOM 20 N1 A A1888 107.927 98.408 55.158 1.00 60.63 N
ATOM 21 C2 A A1888 108.638 99.457 54.728 1.00 59.81 C
ATOM 22 N3 A A1888 109.929 99.536 54.442 1.00 60.02 N
ATOM 23 C4 A A1888 110.529 98.349 54.637 1.00 60.55 C
ATOM 24 P A A1889 115.997 99.639 57.611 1.00 58.34 P
ATOM 25 OP1 A A1889 117.313 100.266 57.914 1.00 57.51 O
ATOM 26 OP2 A A1889 115.720 98.257 58.079 1.00 57.38 O
ATOM 27 O5' A A1889 114.838 100.576 58.175 1.00 57.04 O
TER
ATOM 1 O3' A B2112 100.257 96.968 52.350 1.00 47.24 O
ATOM 2 P G B2113 99.635 97.297 53.793 1.00 48.43 P
ATOM 3 OP1 G B2113 98.819 96.105 54.158 1.00 48.05 O
ATOM 4 OP2 G B2113 99.004 98.640 53.782 1.00 48.17 O
ATOM 5 O5' G B2113 100.901 97.385 54.756 1.00 47.19 O
ATOM 6 C5' G B2113 101.626 96.203 55.144 1.00 46.38 C
ATOM 7 C4' G B2113 102.877 96.587 55.886 1.00 45.12 C
ATOM 8 O4' G B2113 103.677 97.430 55.022 1.00 44.08 O
ATOM 9 C3' G B2113 102.668 97.443 57.123 1.00 46.11 C
ATOM 10 O3' G B2113 102.358 96.672 58.272 1.00 47.02 O
ATOM 11 C2' G B2113 104.010 98.141 57.262 1.00 45.88 C
ATOM 12 O2' G B2113 104.997 97.291 57.805 1.00 47.83 O
ATOM 13 C1' G B2113 104.344 98.415 55.798 1.00 45.63 C
ATOM 14 N9 G B2113 103.918 99.740 55.350 1.00 45.39 N
ATOM 15 C8 G B2113 102.816 100.054 54.589 1.00 44.29 C
ATOM 16 N7 G B2113 102.713 101.332 54.339 1.00 45.29 N
ATOM 17 C5 G B2113 103.809 101.898 54.977 1.00 45.83 C
ATOM 18 C6 G B2113 104.230 103.254 55.059 1.00 46.69 C
ATOM 19 O6 G B2113 103.704 104.257 54.564 1.00 47.93 O
ATOM 20 N1 G B2113 105.391 103.383 55.811 1.00 46.45 N
ATOM 21 C2 G B2113 106.066 102.348 56.407 1.00 46.57 C
ATOM 22 N2 G B2113 107.173 102.683 57.094 1.00 46.48 N
ATOM 23 N3 G B2113 105.687 101.080 56.337 1.00 44.89 N
ATOM 24 C4 G B2113 104.560 100.930 55.611 1.00 45.44 C
ATOM 25 P C B2114 101.643 97.376 59.525 1.00 48.21 P
ATOM 26 OP1 C B2114 101.389 96.332 60.546 1.00 50.00 O
ATOM 27 OP2 C B2114 100.506 98.180 58.997 1.00 49.62 O
ATOM 28 O5' C B2114 102.735 98.385 60.092 1.00 46.49 O
TER
Atoms:
OP1: (117.965,95.809,55.679)
OP2: (116.018,94.308,56.396)
C3': (114.762,98.950,55.406)
C1': (112.885,98.969,53.975)
C5': (116.083,97.280,53.951)
O4': (113.916,98.220,53.354)
C8: (111.984,96.716,54.770)
O2': (113.846,101.061,54.582)
C6: (108.558,97.231,55.348)
C5: (109.932,97.179,55.074)
C4: (110.529,98.349,54.637)
P: (116.679,95.135,55.360)
C4': (115.173,98.486,54.023)
C2': (113.526,99.786,55.098)
C2: (108.638,99.457,54.728)
N1: (107.927,98.408,55.158)
N3: (109.929,99.536,54.442)
N6: (107.849,96.188,55.789)
N7: (110.862,96.153,55.153)
N9: (111.854,98.044,54.441)
O5': (115.659,96.261,54.879)
O3': (115.797,99.704,56.018)
OP2: (116.018,94.308,56.396)
C3': (114.762,98.950,55.406)
C1': (112.885,98.969,53.975)
C5': (116.083,97.280,53.951)
O4': (113.916,98.220,53.354)
C8: (111.984,96.716,54.770)
O2': (113.846,101.061,54.582)
C6: (108.558,97.231,55.348)
C5: (109.932,97.179,55.074)
C4: (110.529,98.349,54.637)
P: (116.679,95.135,55.360)
C4': (115.173,98.486,54.023)
C2': (113.526,99.786,55.098)
C2: (108.638,99.457,54.728)
N1: (107.927,98.408,55.158)
N3: (109.929,99.536,54.442)
N6: (107.849,96.188,55.789)
N7: (110.862,96.153,55.153)
N9: (111.854,98.044,54.441)
O5': (115.659,96.261,54.879)
O3': (115.797,99.704,56.018)
OP1: (98.819,96.105,54.158)
OP2: (99.004,98.640,53.782)
C3': (102.668,97.443,57.123)
C1': (104.344,98.415,55.798)
C5': (101.626,96.203,55.144)
O6: (103.704,104.257,54.564)
O4': (103.677,97.430,55.022)
C8: (102.816,100.054,54.589)
C2: (106.066,102.348,56.407)
C6: (104.230,103.254,55.059)
C5: (103.809,101.898,54.977)
C4: (104.560,100.930,55.611)
P: (99.635,97.297,53.793)
C4': (102.877,96.587,55.886)
C2': (104.010,98.141,57.262)
O2': (104.997,97.291,57.805)
N1: (105.391,103.383,55.811)
N2: (107.173,102.683,57.094)
N3: (105.687,101.080,56.337)
N7: (102.713,101.332,54.339)
N9: (103.918,99.740,55.350)
O5': (100.901,97.385,54.756)
O3': (102.358,96.672,58.272)
OP2: (99.004,98.640,53.782)
C3': (102.668,97.443,57.123)
C1': (104.344,98.415,55.798)
C5': (101.626,96.203,55.144)
O6: (103.704,104.257,54.564)
O4': (103.677,97.430,55.022)
C8: (102.816,100.054,54.589)
C2: (106.066,102.348,56.407)
C6: (104.230,103.254,55.059)
C5: (103.809,101.898,54.977)
C4: (104.560,100.930,55.611)
P: (99.635,97.297,53.793)
C4': (102.877,96.587,55.886)
C2': (104.010,98.141,57.262)
O2': (104.997,97.291,57.805)
N1: (105.391,103.383,55.811)
N2: (107.173,102.683,57.094)
N3: (105.687,101.080,56.337)
N7: (102.713,101.332,54.339)
N9: (103.918,99.740,55.350)
O5': (100.901,97.385,54.756)
O3': (102.358,96.672,58.272)
Image (generated by PyMOL):