Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01903:01914
Extra
PDB:
ATOM 1 O3' G A1902 105.554 110.059 89.661 1.00 45.92 O
ATOM 2 P G A1903 105.930 110.224 91.212 1.00 47.79 P
ATOM 3 OP1 G A1903 104.679 109.990 91.984 1.00 48.96 O
ATOM 4 OP2 G A1903 106.693 111.486 91.417 1.00 46.57 O
ATOM 5 O5' G A1903 106.912 109.002 91.469 1.00 47.16 O
ATOM 6 C5' G A1903 106.457 107.651 91.331 1.00 47.32 C
ATOM 7 C4' G A1903 107.553 106.700 91.731 1.00 50.46 C
ATOM 8 O4' G A1903 108.645 106.792 90.778 1.00 50.52 O
ATOM 9 C3' G A1903 108.199 107.013 93.070 1.00 51.01 C
ATOM 10 O3' G A1903 107.449 106.499 94.160 1.00 53.13 O
ATOM 11 C2' G A1903 109.564 106.363 92.919 1.00 51.73 C
ATOM 12 O2' G A1903 109.508 104.960 93.072 1.00 52.53 O
ATOM 13 C1' G A1903 109.884 106.700 91.461 1.00 51.60 C
ATOM 14 N9 G A1903 110.569 107.983 91.329 1.00 52.71 N
ATOM 15 C8 G A1903 110.020 109.177 90.922 1.00 52.54 C
ATOM 16 N7 G A1903 110.878 110.160 90.919 1.00 53.51 N
ATOM 17 C5 G A1903 112.067 109.581 91.348 1.00 53.00 C
ATOM 18 C6 G A1903 113.348 110.154 91.545 1.00 53.41 C
ATOM 19 O6 G A1903 113.702 111.326 91.374 1.00 54.51 O
ATOM 20 N1 G A1903 114.267 109.210 91.984 1.00 52.50 N
ATOM 21 C2 G A1903 113.993 107.888 92.203 1.00 52.19 C
ATOM 22 N2 G A1903 115.014 107.139 92.625 1.00 53.93 N
ATOM 23 N3 G A1903 112.806 107.339 92.024 1.00 51.38 N
ATOM 24 C4 G A1903 111.895 108.238 91.600 1.00 52.59 C
ATOM 25 P C A1904 107.458 107.278 95.562 1.00 55.02 P
ATOM 26 OP1 C A1904 106.533 106.586 96.494 1.00 56.23 O
ATOM 27 OP2 C A1904 107.269 108.726 95.291 1.00 56.07 O
ATOM 28 O5' C A1904 108.940 107.059 96.095 1.00 57.64 O
TER
ATOM 1 O3' U B1913 112.426 96.081 89.370 1.00 83.31 O
ATOM 2 P A B1914 113.943 95.580 89.188 1.00 78.99 P
ATOM 3 OP1 A B1914 114.087 95.013 87.819 1.00 78.37 O
ATOM 4 OP2 A B1914 114.294 94.751 90.375 1.00 79.01 O
ATOM 5 O5' A B1914 114.791 96.926 89.267 1.00 76.44 O
ATOM 6 C5' A B1914 116.047 97.062 88.575 1.00 71.47 C
ATOM 7 C4' A B1914 116.553 98.478 88.704 1.00 67.85 C
ATOM 8 O4' A B1914 115.597 99.385 88.095 1.00 66.36 O
ATOM 9 C3' A B1914 116.688 98.980 90.130 1.00 66.14 C
ATOM 10 O3' A B1914 117.933 98.582 90.691 1.00 65.73 O
ATOM 11 C2' A B1914 116.579 100.489 89.961 1.00 64.83 C
ATOM 12 O2' A B1914 117.794 101.061 89.521 1.00 62.41 O
ATOM 13 C1' A B1914 115.537 100.589 88.842 1.00 64.98 C
ATOM 14 N9 A B1914 114.153 100.792 89.281 1.00 64.37 N
ATOM 15 C8 A B1914 113.159 99.852 89.412 1.00 63.99 C
ATOM 16 N7 A B1914 112.006 100.347 89.787 1.00 62.41 N
ATOM 17 C5 A B1914 112.255 101.704 89.919 1.00 64.30 C
ATOM 18 C6 A B1914 111.433 102.788 90.288 1.00 64.94 C
ATOM 19 N6 A B1914 110.134 102.672 90.579 1.00 65.29 N
ATOM 20 N1 A B1914 111.998 104.012 90.341 1.00 64.24 N
ATOM 21 C2 A B1914 113.293 104.133 90.032 1.00 64.02 C
ATOM 22 N3 A B1914 114.162 103.199 89.662 1.00 64.29 N
ATOM 23 C4 A B1914 113.575 101.991 89.625 1.00 64.35 C
ATOM 24 P A B1915 118.035 98.259 92.264 1.00 66.19 P
ATOM 25 OP1 A B1915 119.332 97.557 92.492 1.00 65.74 O
ATOM 26 OP2 A B1915 116.760 97.612 92.688 1.00 64.01 O
ATOM 27 O5' A B1915 118.117 99.691 92.960 1.00 63.34 O
TER
ATOM 2 P G A1903 105.930 110.224 91.212 1.00 47.79 P
ATOM 3 OP1 G A1903 104.679 109.990 91.984 1.00 48.96 O
ATOM 4 OP2 G A1903 106.693 111.486 91.417 1.00 46.57 O
ATOM 5 O5' G A1903 106.912 109.002 91.469 1.00 47.16 O
ATOM 6 C5' G A1903 106.457 107.651 91.331 1.00 47.32 C
ATOM 7 C4' G A1903 107.553 106.700 91.731 1.00 50.46 C
ATOM 8 O4' G A1903 108.645 106.792 90.778 1.00 50.52 O
ATOM 9 C3' G A1903 108.199 107.013 93.070 1.00 51.01 C
ATOM 10 O3' G A1903 107.449 106.499 94.160 1.00 53.13 O
ATOM 11 C2' G A1903 109.564 106.363 92.919 1.00 51.73 C
ATOM 12 O2' G A1903 109.508 104.960 93.072 1.00 52.53 O
ATOM 13 C1' G A1903 109.884 106.700 91.461 1.00 51.60 C
ATOM 14 N9 G A1903 110.569 107.983 91.329 1.00 52.71 N
ATOM 15 C8 G A1903 110.020 109.177 90.922 1.00 52.54 C
ATOM 16 N7 G A1903 110.878 110.160 90.919 1.00 53.51 N
ATOM 17 C5 G A1903 112.067 109.581 91.348 1.00 53.00 C
ATOM 18 C6 G A1903 113.348 110.154 91.545 1.00 53.41 C
ATOM 19 O6 G A1903 113.702 111.326 91.374 1.00 54.51 O
ATOM 20 N1 G A1903 114.267 109.210 91.984 1.00 52.50 N
ATOM 21 C2 G A1903 113.993 107.888 92.203 1.00 52.19 C
ATOM 22 N2 G A1903 115.014 107.139 92.625 1.00 53.93 N
ATOM 23 N3 G A1903 112.806 107.339 92.024 1.00 51.38 N
ATOM 24 C4 G A1903 111.895 108.238 91.600 1.00 52.59 C
ATOM 25 P C A1904 107.458 107.278 95.562 1.00 55.02 P
ATOM 26 OP1 C A1904 106.533 106.586 96.494 1.00 56.23 O
ATOM 27 OP2 C A1904 107.269 108.726 95.291 1.00 56.07 O
ATOM 28 O5' C A1904 108.940 107.059 96.095 1.00 57.64 O
TER
ATOM 1 O3' U B1913 112.426 96.081 89.370 1.00 83.31 O
ATOM 2 P A B1914 113.943 95.580 89.188 1.00 78.99 P
ATOM 3 OP1 A B1914 114.087 95.013 87.819 1.00 78.37 O
ATOM 4 OP2 A B1914 114.294 94.751 90.375 1.00 79.01 O
ATOM 5 O5' A B1914 114.791 96.926 89.267 1.00 76.44 O
ATOM 6 C5' A B1914 116.047 97.062 88.575 1.00 71.47 C
ATOM 7 C4' A B1914 116.553 98.478 88.704 1.00 67.85 C
ATOM 8 O4' A B1914 115.597 99.385 88.095 1.00 66.36 O
ATOM 9 C3' A B1914 116.688 98.980 90.130 1.00 66.14 C
ATOM 10 O3' A B1914 117.933 98.582 90.691 1.00 65.73 O
ATOM 11 C2' A B1914 116.579 100.489 89.961 1.00 64.83 C
ATOM 12 O2' A B1914 117.794 101.061 89.521 1.00 62.41 O
ATOM 13 C1' A B1914 115.537 100.589 88.842 1.00 64.98 C
ATOM 14 N9 A B1914 114.153 100.792 89.281 1.00 64.37 N
ATOM 15 C8 A B1914 113.159 99.852 89.412 1.00 63.99 C
ATOM 16 N7 A B1914 112.006 100.347 89.787 1.00 62.41 N
ATOM 17 C5 A B1914 112.255 101.704 89.919 1.00 64.30 C
ATOM 18 C6 A B1914 111.433 102.788 90.288 1.00 64.94 C
ATOM 19 N6 A B1914 110.134 102.672 90.579 1.00 65.29 N
ATOM 20 N1 A B1914 111.998 104.012 90.341 1.00 64.24 N
ATOM 21 C2 A B1914 113.293 104.133 90.032 1.00 64.02 C
ATOM 22 N3 A B1914 114.162 103.199 89.662 1.00 64.29 N
ATOM 23 C4 A B1914 113.575 101.991 89.625 1.00 64.35 C
ATOM 24 P A B1915 118.035 98.259 92.264 1.00 66.19 P
ATOM 25 OP1 A B1915 119.332 97.557 92.492 1.00 65.74 O
ATOM 26 OP2 A B1915 116.760 97.612 92.688 1.00 64.01 O
ATOM 27 O5' A B1915 118.117 99.691 92.960 1.00 63.34 O
TER
Atoms:
OP1: (104.679,109.990,91.984)
OP2: (106.693,111.486,91.417)
C3': (108.199,107.013,93.070)
C1': (109.884,106.700,91.461)
C5': (106.457,107.651,91.331)
O6: (113.702,111.326,91.374)
O4': (108.645,106.792,90.778)
C8: (110.020,109.177,90.922)
C2: (113.993,107.888,92.203)
C6: (113.348,110.154,91.545)
C5: (112.067,109.581,91.348)
C4: (111.895,108.238,91.600)
P: (105.930,110.224,91.212)
C4': (107.553,106.700,91.731)
C2': (109.564,106.363,92.919)
O2': (109.508,104.960,93.072)
N1: (114.267,109.210,91.984)
N2: (115.014,107.139,92.625)
N3: (112.806,107.339,92.024)
N7: (110.878,110.160,90.919)
N9: (110.569,107.983,91.329)
O5': (106.912,109.002,91.469)
O3': (107.449,106.499,94.160)
OP2: (106.693,111.486,91.417)
C3': (108.199,107.013,93.070)
C1': (109.884,106.700,91.461)
C5': (106.457,107.651,91.331)
O6: (113.702,111.326,91.374)
O4': (108.645,106.792,90.778)
C8: (110.020,109.177,90.922)
C2: (113.993,107.888,92.203)
C6: (113.348,110.154,91.545)
C5: (112.067,109.581,91.348)
C4: (111.895,108.238,91.600)
P: (105.930,110.224,91.212)
C4': (107.553,106.700,91.731)
C2': (109.564,106.363,92.919)
O2': (109.508,104.960,93.072)
N1: (114.267,109.210,91.984)
N2: (115.014,107.139,92.625)
N3: (112.806,107.339,92.024)
N7: (110.878,110.160,90.919)
N9: (110.569,107.983,91.329)
O5': (106.912,109.002,91.469)
O3': (107.449,106.499,94.160)
OP1: (114.087,95.013,87.819)
OP2: (114.294,94.751,90.375)
C3': (116.688,98.980,90.130)
C1': (115.537,100.589,88.842)
C5': (116.047,97.062,88.575)
O4': (115.597,99.385,88.095)
C8: (113.159,99.852,89.412)
O2': (117.794,101.061,89.521)
C6: (111.433,102.788,90.288)
C5: (112.255,101.704,89.919)
C4: (113.575,101.991,89.625)
P: (113.943,95.580,89.188)
C4': (116.553,98.478,88.704)
C2': (116.579,100.489,89.961)
C2: (113.293,104.133,90.032)
N1: (111.998,104.012,90.341)
N3: (114.162,103.199,89.662)
N6: (110.134,102.672,90.579)
N7: (112.006,100.347,89.787)
N9: (114.153,100.792,89.281)
O5': (114.791,96.926,89.267)
O3': (117.933,98.582,90.691)
OP2: (114.294,94.751,90.375)
C3': (116.688,98.980,90.130)
C1': (115.537,100.589,88.842)
C5': (116.047,97.062,88.575)
O4': (115.597,99.385,88.095)
C8: (113.159,99.852,89.412)
O2': (117.794,101.061,89.521)
C6: (111.433,102.788,90.288)
C5: (112.255,101.704,89.919)
C4: (113.575,101.991,89.625)
P: (113.943,95.580,89.188)
C4': (116.553,98.478,88.704)
C2': (116.579,100.489,89.961)
C2: (113.293,104.133,90.032)
N1: (111.998,104.012,90.341)
N3: (114.162,103.199,89.662)
N6: (110.134,102.672,90.579)
N7: (112.006,100.347,89.787)
N9: (114.153,100.792,89.281)
O5': (114.791,96.926,89.267)
O3': (117.933,98.582,90.691)
Image (generated by PyMOL):