Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01903:01914
Extra
PDB:
ATOM 1 O3' G A1902 105.682 109.946 89.602 1.00 45.50 O
ATOM 2 P G A1903 106.092 110.073 91.145 1.00 46.67 P
ATOM 3 OP1 G A1903 104.868 109.790 91.942 1.00 46.70 O
ATOM 4 OP2 G A1903 106.824 111.352 91.350 1.00 45.62 O
ATOM 5 O5' G A1903 107.106 108.867 91.342 1.00 46.17 O
ATOM 6 C5' G A1903 106.662 107.511 91.201 1.00 46.43 C
ATOM 7 C4' G A1903 107.759 106.566 91.609 1.00 47.67 C
ATOM 8 O4' G A1903 108.848 106.667 90.660 1.00 47.62 O
ATOM 9 C3' G A1903 108.401 106.868 92.953 1.00 47.75 C
ATOM 10 O3' G A1903 107.664 106.320 94.032 1.00 49.62 O
ATOM 11 C2' G A1903 109.766 106.224 92.799 1.00 47.83 C
ATOM 12 O2' G A1903 109.706 104.821 92.930 1.00 49.21 O
ATOM 13 C1' G A1903 110.083 106.574 91.347 1.00 48.34 C
ATOM 14 N9 G A1903 110.760 107.860 91.230 1.00 48.88 N
ATOM 15 C8 G A1903 110.209 109.058 90.838 1.00 49.49 C
ATOM 16 N7 G A1903 111.069 110.037 90.833 1.00 50.84 N
ATOM 17 C5 G A1903 112.259 109.451 91.250 1.00 50.37 C
ATOM 18 C6 G A1903 113.541 110.015 91.445 1.00 49.94 C
ATOM 19 O6 G A1903 113.901 111.185 91.278 1.00 50.92 O
ATOM 20 N1 G A1903 114.456 109.064 91.877 1.00 48.74 N
ATOM 21 C2 G A1903 114.175 107.742 92.091 1.00 48.32 C
ATOM 22 N2 G A1903 115.191 106.982 92.508 1.00 49.70 N
ATOM 23 N3 G A1903 112.989 107.204 91.912 1.00 48.26 N
ATOM 24 C4 G A1903 112.083 108.109 91.496 1.00 49.03 C
ATOM 25 P C A1904 107.664 107.066 95.452 1.00 51.90 P
ATOM 26 OP1 C A1904 106.759 106.310 96.345 1.00 53.81 O
ATOM 27 OP2 C A1904 107.425 108.518 95.226 1.00 51.84 O
ATOM 28 O5' C A1904 109.152 106.875 95.988 1.00 54.43 O
TER
ATOM 1 O3' U B1913 112.529 95.765 89.050 1.00 80.35 O
ATOM 2 P A B1914 114.074 95.325 89.062 1.00 76.39 P
ATOM 3 OP1 A B1914 114.369 94.649 87.771 1.00 76.29 O
ATOM 4 OP2 A B1914 114.344 94.620 90.347 1.00 76.00 O
ATOM 5 O5' A B1914 114.854 96.713 89.094 1.00 72.99 O
ATOM 6 C5' A B1914 116.113 96.878 88.419 1.00 67.54 C
ATOM 7 C4' A B1914 116.595 98.299 88.569 1.00 63.98 C
ATOM 8 O4' A B1914 115.607 99.196 88.004 1.00 62.71 O
ATOM 9 C3' A B1914 116.759 98.784 89.997 1.00 61.88 C
ATOM 10 O3' A B1914 118.026 98.402 90.515 1.00 62.45 O
ATOM 11 C2' A B1914 116.636 100.293 89.847 1.00 60.85 C
ATOM 12 O2' A B1914 117.832 100.885 89.380 1.00 57.46 O
ATOM 13 C1' A B1914 115.568 100.398 88.755 1.00 60.85 C
ATOM 14 N9 A B1914 114.192 100.617 89.214 1.00 59.87 N
ATOM 15 C8 A B1914 113.181 99.697 89.338 1.00 59.27 C
ATOM 16 N7 A B1914 112.037 100.212 89.716 1.00 58.10 N
ATOM 17 C5 A B1914 112.314 101.562 89.865 1.00 59.47 C
ATOM 18 C6 A B1914 111.514 102.658 90.241 1.00 59.83 C
ATOM 19 N6 A B1914 110.212 102.569 90.521 1.00 59.97 N
ATOM 20 N1 A B1914 112.106 103.868 90.312 1.00 59.40 N
ATOM 21 C2 A B1914 113.404 103.965 90.012 1.00 58.91 C
ATOM 22 N3 A B1914 114.253 103.017 89.634 1.00 58.76 N
ATOM 23 C4 A B1914 113.641 101.823 89.578 1.00 59.49 C
ATOM 24 P A B1915 118.189 98.097 92.084 1.00 63.90 P
ATOM 25 OP1 A B1915 119.504 97.422 92.277 1.00 63.51 O
ATOM 26 OP2 A B1915 116.941 97.430 92.549 1.00 63.48 O
ATOM 27 O5' A B1915 118.265 99.537 92.764 1.00 61.71 O
TER
ATOM 2 P G A1903 106.092 110.073 91.145 1.00 46.67 P
ATOM 3 OP1 G A1903 104.868 109.790 91.942 1.00 46.70 O
ATOM 4 OP2 G A1903 106.824 111.352 91.350 1.00 45.62 O
ATOM 5 O5' G A1903 107.106 108.867 91.342 1.00 46.17 O
ATOM 6 C5' G A1903 106.662 107.511 91.201 1.00 46.43 C
ATOM 7 C4' G A1903 107.759 106.566 91.609 1.00 47.67 C
ATOM 8 O4' G A1903 108.848 106.667 90.660 1.00 47.62 O
ATOM 9 C3' G A1903 108.401 106.868 92.953 1.00 47.75 C
ATOM 10 O3' G A1903 107.664 106.320 94.032 1.00 49.62 O
ATOM 11 C2' G A1903 109.766 106.224 92.799 1.00 47.83 C
ATOM 12 O2' G A1903 109.706 104.821 92.930 1.00 49.21 O
ATOM 13 C1' G A1903 110.083 106.574 91.347 1.00 48.34 C
ATOM 14 N9 G A1903 110.760 107.860 91.230 1.00 48.88 N
ATOM 15 C8 G A1903 110.209 109.058 90.838 1.00 49.49 C
ATOM 16 N7 G A1903 111.069 110.037 90.833 1.00 50.84 N
ATOM 17 C5 G A1903 112.259 109.451 91.250 1.00 50.37 C
ATOM 18 C6 G A1903 113.541 110.015 91.445 1.00 49.94 C
ATOM 19 O6 G A1903 113.901 111.185 91.278 1.00 50.92 O
ATOM 20 N1 G A1903 114.456 109.064 91.877 1.00 48.74 N
ATOM 21 C2 G A1903 114.175 107.742 92.091 1.00 48.32 C
ATOM 22 N2 G A1903 115.191 106.982 92.508 1.00 49.70 N
ATOM 23 N3 G A1903 112.989 107.204 91.912 1.00 48.26 N
ATOM 24 C4 G A1903 112.083 108.109 91.496 1.00 49.03 C
ATOM 25 P C A1904 107.664 107.066 95.452 1.00 51.90 P
ATOM 26 OP1 C A1904 106.759 106.310 96.345 1.00 53.81 O
ATOM 27 OP2 C A1904 107.425 108.518 95.226 1.00 51.84 O
ATOM 28 O5' C A1904 109.152 106.875 95.988 1.00 54.43 O
TER
ATOM 1 O3' U B1913 112.529 95.765 89.050 1.00 80.35 O
ATOM 2 P A B1914 114.074 95.325 89.062 1.00 76.39 P
ATOM 3 OP1 A B1914 114.369 94.649 87.771 1.00 76.29 O
ATOM 4 OP2 A B1914 114.344 94.620 90.347 1.00 76.00 O
ATOM 5 O5' A B1914 114.854 96.713 89.094 1.00 72.99 O
ATOM 6 C5' A B1914 116.113 96.878 88.419 1.00 67.54 C
ATOM 7 C4' A B1914 116.595 98.299 88.569 1.00 63.98 C
ATOM 8 O4' A B1914 115.607 99.196 88.004 1.00 62.71 O
ATOM 9 C3' A B1914 116.759 98.784 89.997 1.00 61.88 C
ATOM 10 O3' A B1914 118.026 98.402 90.515 1.00 62.45 O
ATOM 11 C2' A B1914 116.636 100.293 89.847 1.00 60.85 C
ATOM 12 O2' A B1914 117.832 100.885 89.380 1.00 57.46 O
ATOM 13 C1' A B1914 115.568 100.398 88.755 1.00 60.85 C
ATOM 14 N9 A B1914 114.192 100.617 89.214 1.00 59.87 N
ATOM 15 C8 A B1914 113.181 99.697 89.338 1.00 59.27 C
ATOM 16 N7 A B1914 112.037 100.212 89.716 1.00 58.10 N
ATOM 17 C5 A B1914 112.314 101.562 89.865 1.00 59.47 C
ATOM 18 C6 A B1914 111.514 102.658 90.241 1.00 59.83 C
ATOM 19 N6 A B1914 110.212 102.569 90.521 1.00 59.97 N
ATOM 20 N1 A B1914 112.106 103.868 90.312 1.00 59.40 N
ATOM 21 C2 A B1914 113.404 103.965 90.012 1.00 58.91 C
ATOM 22 N3 A B1914 114.253 103.017 89.634 1.00 58.76 N
ATOM 23 C4 A B1914 113.641 101.823 89.578 1.00 59.49 C
ATOM 24 P A B1915 118.189 98.097 92.084 1.00 63.90 P
ATOM 25 OP1 A B1915 119.504 97.422 92.277 1.00 63.51 O
ATOM 26 OP2 A B1915 116.941 97.430 92.549 1.00 63.48 O
ATOM 27 O5' A B1915 118.265 99.537 92.764 1.00 61.71 O
TER
Atoms:
OP1: (104.868,109.790,91.942)
OP2: (106.824,111.352,91.350)
C3': (108.401,106.868,92.953)
C1': (110.083,106.574,91.347)
C5': (106.662,107.511,91.201)
O6: (113.901,111.185,91.278)
O4': (108.848,106.667,90.660)
C8: (110.209,109.058,90.838)
C2: (114.175,107.742,92.091)
C6: (113.541,110.015,91.445)
C5: (112.259,109.451,91.250)
C4: (112.083,108.109,91.496)
P: (106.092,110.073,91.145)
C4': (107.759,106.566,91.609)
C2': (109.766,106.224,92.799)
O2': (109.706,104.821,92.930)
N1: (114.456,109.064,91.877)
N2: (115.191,106.982,92.508)
N3: (112.989,107.204,91.912)
N7: (111.069,110.037,90.833)
N9: (110.760,107.860,91.230)
O5': (107.106,108.867,91.342)
O3': (107.664,106.320,94.032)
OP2: (106.824,111.352,91.350)
C3': (108.401,106.868,92.953)
C1': (110.083,106.574,91.347)
C5': (106.662,107.511,91.201)
O6: (113.901,111.185,91.278)
O4': (108.848,106.667,90.660)
C8: (110.209,109.058,90.838)
C2: (114.175,107.742,92.091)
C6: (113.541,110.015,91.445)
C5: (112.259,109.451,91.250)
C4: (112.083,108.109,91.496)
P: (106.092,110.073,91.145)
C4': (107.759,106.566,91.609)
C2': (109.766,106.224,92.799)
O2': (109.706,104.821,92.930)
N1: (114.456,109.064,91.877)
N2: (115.191,106.982,92.508)
N3: (112.989,107.204,91.912)
N7: (111.069,110.037,90.833)
N9: (110.760,107.860,91.230)
O5': (107.106,108.867,91.342)
O3': (107.664,106.320,94.032)
OP1: (114.369,94.649,87.771)
OP2: (114.344,94.620,90.347)
C3': (116.759,98.784,89.997)
C1': (115.568,100.398,88.755)
C5': (116.113,96.878,88.419)
O4': (115.607,99.196,88.004)
C8: (113.181,99.697,89.338)
O2': (117.832,100.885,89.380)
C6: (111.514,102.658,90.241)
C5: (112.314,101.562,89.865)
C4: (113.641,101.823,89.578)
P: (114.074,95.325,89.062)
C4': (116.595,98.299,88.569)
C2': (116.636,100.293,89.847)
C2: (113.404,103.965,90.012)
N1: (112.106,103.868,90.312)
N3: (114.253,103.017,89.634)
N6: (110.212,102.569,90.521)
N7: (112.037,100.212,89.716)
N9: (114.192,100.617,89.214)
O5': (114.854,96.713,89.094)
O3': (118.026,98.402,90.515)
OP2: (114.344,94.620,90.347)
C3': (116.759,98.784,89.997)
C1': (115.568,100.398,88.755)
C5': (116.113,96.878,88.419)
O4': (115.607,99.196,88.004)
C8: (113.181,99.697,89.338)
O2': (117.832,100.885,89.380)
C6: (111.514,102.658,90.241)
C5: (112.314,101.562,89.865)
C4: (113.641,101.823,89.578)
P: (114.074,95.325,89.062)
C4': (116.595,98.299,88.569)
C2': (116.636,100.293,89.847)
C2: (113.404,103.965,90.012)
N1: (112.106,103.868,90.312)
N3: (114.253,103.017,89.634)
N6: (110.212,102.569,90.521)
N7: (112.037,100.212,89.716)
N9: (114.192,100.617,89.214)
O5': (114.854,96.713,89.094)
O3': (118.026,98.402,90.515)
Image (generated by PyMOL):