ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01034:01056

Extra

PDB:
ATOM 1 O3' G A1033 23.648 105.598 100.770 1.00 36.12 O
ATOM 2 P G A1034 24.233 106.022 102.209 1.00 37.57 P
ATOM 3 OP1 G A1034 23.455 107.187 102.711 1.00 37.06 O
ATOM 4 OP2 G A1034 25.708 106.119 102.115 1.00 36.87 O
ATOM 5 O5' G A1034 23.916 104.757 103.121 1.00 37.44 O
ATOM 6 C5' G A1034 22.586 104.489 103.580 1.00 37.25 C
ATOM 7 C4' G A1034 22.607 103.414 104.640 1.00 38.29 C
ATOM 8 O4' G A1034 23.110 102.178 104.066 1.00 38.04 O
ATOM 9 C3' G A1034 23.528 103.639 105.828 1.00 37.97 C
ATOM 10 O3' G A1034 22.995 104.501 106.811 1.00 38.69 O
ATOM 11 C2' G A1034 23.664 102.230 106.362 1.00 38.78 C
ATOM 12 O2' G A1034 22.480 101.821 107.014 1.00 38.34 O
ATOM 13 C1' G A1034 23.824 101.451 105.058 1.00 39.80 C
ATOM 14 N9 G A1034 25.231 101.378 104.663 1.00 42.83 N
ATOM 15 C8 G A1034 25.844 102.040 103.624 1.00 43.96 C
ATOM 16 N7 G A1034 27.120 101.781 103.531 1.00 44.54 N
ATOM 17 C5 G A1034 27.368 100.894 104.567 1.00 45.34 C
ATOM 18 C6 G A1034 28.573 100.262 104.966 1.00 45.85 C
ATOM 19 O6 G A1034 29.699 100.367 104.474 1.00 46.10 O
ATOM 20 N1 G A1034 28.374 99.436 106.064 1.00 45.66 N
ATOM 21 C2 G A1034 27.176 99.244 106.698 1.00 45.74 C
ATOM 22 N2 G A1034 27.186 98.399 107.730 1.00 48.86 N
ATOM 23 N3 G A1034 26.049 99.831 106.345 1.00 44.85 N
ATOM 24 C4 G A1034 26.215 100.634 105.277 1.00 44.56 C
ATOM 25 P G A1035 23.975 105.490 107.607 1.00 41.73 P
ATOM 26 OP1 G A1035 23.107 106.276 108.520 1.00 40.98 O
ATOM 27 OP2 G A1035 24.822 106.194 106.623 1.00 42.67 O
ATOM 28 O5' G A1035 24.920 104.530 108.463 1.00 40.10 O
TER

ATOM 1 O3' U B1055 15.759 92.386 110.983 1.00 39.07 O
ATOM 2 P A B1056 17.134 92.633 111.752 1.00 38.71 P
ATOM 3 OP1 A B1056 17.441 91.417 112.538 1.00 39.47 O
ATOM 4 OP2 A B1056 17.009 93.944 112.433 1.00 36.88 O
ATOM 5 O5' A B1056 18.208 92.742 110.585 1.00 39.16 O
ATOM 6 C5' A B1056 18.655 91.569 109.875 1.00 40.28 C
ATOM 7 C4' A B1056 19.921 91.880 109.104 1.00 40.14 C
ATOM 8 O4' A B1056 19.625 92.845 108.063 1.00 39.45 O
ATOM 9 C3' A B1056 21.030 92.533 109.916 1.00 38.69 C
ATOM 10 O3' A B1056 21.807 91.553 110.591 1.00 35.68 O
ATOM 11 C2' A B1056 21.842 93.252 108.850 1.00 39.96 C
ATOM 12 O2' A B1056 22.727 92.385 108.173 1.00 42.86 O
ATOM 13 C1' A B1056 20.747 93.688 107.872 1.00 40.92 C
ATOM 14 N9 A B1056 20.326 95.088 107.987 1.00 41.13 N
ATOM 15 C8 A B1056 19.197 95.612 108.573 1.00 39.84 C
ATOM 16 N7 A B1056 19.104 96.916 108.468 1.00 38.96 N
ATOM 17 C5 A B1056 20.251 97.278 107.777 1.00 39.69 C
ATOM 18 C6 A B1056 20.740 98.520 107.339 1.00 39.46 C
ATOM 19 N6 A B1056 20.109 99.675 107.534 1.00 38.79 N
ATOM 20 N1 A B1056 21.918 98.533 106.680 1.00 40.94 N
ATOM 21 C2 A B1056 22.551 97.371 106.472 1.00 40.32 C
ATOM 22 N3 A B1056 22.192 96.143 106.826 1.00 38.60 N
ATOM 23 C4 A B1056 21.018 96.165 107.482 1.00 40.28 C
ATOM 24 P A B1057 22.404 91.867 112.042 1.00 33.98 P
ATOM 25 OP1 A B1057 23.004 90.611 112.526 1.00 32.70 O
ATOM 26 OP2 A B1057 21.369 92.547 112.850 1.00 35.04 O
ATOM 27 O5' A B1057 23.568 92.912 111.763 1.00 35.59 O
TER

Atoms:
OP1: (23.455,107.187,102.711)
OP2: (25.708,106.119,102.115)
C3': (23.528,103.639,105.828)
C1': (23.824,101.451,105.058)
C5': (22.586,104.489,103.580)
O6: (29.699,100.367,104.474)
O4': (23.110,102.178,104.066)
C8: (25.844,102.040,103.624)
C2: (27.176,99.244,106.698)
C6: (28.573,100.262,104.966)
C5: (27.368,100.894,104.567)
C4: (26.215,100.634,105.277)
P: (24.233,106.022,102.209)
C4': (22.607,103.414,104.640)
C2': (23.664,102.230,106.362)
O2': (22.480,101.821,107.014)
N1: (28.374,99.436,106.064)
N2: (27.186,98.399,107.730)
N3: (26.049,99.831,106.345)
N7: (27.120,101.781,103.531)
N9: (25.231,101.378,104.663)
O5': (23.916,104.757,103.121)
O3': (22.995,104.501,106.811)
OP1: (17.441,91.417,112.538)
OP2: (17.009,93.944,112.433)
C3': (21.030,92.533,109.916)
C1': (20.747,93.688,107.872)
C5': (18.655,91.569,109.875)
O4': (19.625,92.845,108.063)
C8: (19.197,95.612,108.573)
O2': (22.727,92.385,108.173)
C6: (20.740,98.520,107.339)
C5: (20.251,97.278,107.777)
C4: (21.018,96.165,107.482)
P: (17.134,92.633,111.752)
C4': (19.921,91.880,109.104)
C2': (21.842,93.252,108.850)
C2: (22.551,97.371,106.472)
N1: (21.918,98.533,106.680)
N3: (22.192,96.143,106.826)
N6: (20.109,99.675,107.534)
N7: (19.104,96.916,108.468)
N9: (20.326,95.088,107.987)
O5': (18.208,92.742,110.585)
O3': (21.807,91.553,110.591)
Image (generated by PyMOL):
PyMOL image
show in jmol