Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01888:02113
Extra
PDB:
ATOM 1 O3' G A1887 116.836 93.898 53.948 1.00 78.88 O
ATOM 2 P A A1888 116.677 94.793 55.282 1.00 76.81 P
ATOM 3 OP1 A A1888 117.988 95.440 55.556 1.00 76.97 O
ATOM 4 OP2 A A1888 116.036 93.978 56.339 1.00 76.54 O
ATOM 5 O5' A A1888 115.669 95.946 54.841 1.00 72.74 O
ATOM 6 C5' A A1888 116.094 96.962 53.914 1.00 66.67 C
ATOM 7 C4' A A1888 115.190 98.170 53.988 1.00 61.31 C
ATOM 8 O4' A A1888 113.934 97.911 53.318 1.00 60.89 O
ATOM 9 C3' A A1888 114.782 98.638 55.370 1.00 59.01 C
ATOM 10 O3' A A1888 115.825 99.385 55.973 1.00 57.20 O
ATOM 11 C2' A A1888 113.553 99.481 55.055 1.00 59.41 C
ATOM 12 O2' A A1888 113.880 100.745 54.511 1.00 59.52 O
ATOM 13 C1' A A1888 112.902 98.653 53.946 1.00 59.76 C
ATOM 14 N9 A A1888 111.893 97.712 54.432 1.00 59.74 N
ATOM 15 C8 A A1888 112.063 96.397 54.800 1.00 59.74 C
ATOM 16 N7 A A1888 110.956 95.805 55.177 1.00 59.37 N
ATOM 17 C5 A A1888 109.993 96.797 55.057 1.00 58.63 C
ATOM 18 C6 A A1888 108.617 96.808 55.311 1.00 58.16 C
ATOM 19 N6 A A1888 107.941 95.753 55.770 1.00 57.02 N
ATOM 20 N1 A A1888 107.947 97.957 55.081 1.00 58.76 N
ATOM 21 C2 A A1888 108.628 99.022 54.638 1.00 58.02 C
ATOM 22 N3 A A1888 109.922 99.138 54.371 1.00 58.16 N
ATOM 23 C4 A A1888 110.557 97.977 54.602 1.00 58.79 C
ATOM 24 P A A1889 116.024 99.340 57.567 1.00 56.83 P
ATOM 25 OP1 A A1889 117.344 99.975 57.840 1.00 54.63 O
ATOM 26 OP2 A A1889 115.752 97.969 58.076 1.00 55.05 O
ATOM 27 O5' A A1889 114.866 100.288 58.116 1.00 54.69 O
TER
ATOM 1 O3' A B2112 100.313 96.741 52.320 1.00 47.52 O
ATOM 2 P G B2113 99.703 97.055 53.768 1.00 48.68 P
ATOM 3 OP1 G B2113 98.892 95.862 54.146 1.00 48.13 O
ATOM 4 OP2 G B2113 99.064 98.390 53.729 1.00 48.50 O
ATOM 5 O5' G B2113 100.983 97.157 54.714 1.00 47.77 O
ATOM 6 C5' G B2113 101.723 95.980 55.102 1.00 45.91 C
ATOM 7 C4' G B2113 102.970 96.373 55.856 1.00 45.39 C
ATOM 8 O4' G B2113 103.782 97.211 54.996 1.00 44.77 O
ATOM 9 C3' G B2113 102.752 97.227 57.095 1.00 46.07 C
ATOM 10 O3' G B2113 102.451 96.449 58.245 1.00 46.39 O
ATOM 11 C2' G B2113 104.085 97.944 57.238 1.00 46.19 C
ATOM 12 O2' G B2113 105.075 97.132 57.832 1.00 47.31 O
ATOM 13 C1' G B2113 104.438 98.201 55.772 1.00 45.40 C
ATOM 14 N9 G B2113 104.014 99.519 55.305 1.00 44.58 N
ATOM 15 C8 G B2113 102.925 99.821 54.520 1.00 45.28 C
ATOM 16 N7 G B2113 102.807 101.100 54.280 1.00 46.21 N
ATOM 17 C5 G B2113 103.882 101.675 54.945 1.00 45.63 C
ATOM 18 C6 G B2113 104.277 103.036 55.054 1.00 46.03 C
ATOM 19 O6 G B2113 103.744 104.038 54.562 1.00 46.62 O
ATOM 20 N1 G B2113 105.423 103.172 55.830 1.00 45.05 N
ATOM 21 C2 G B2113 106.105 102.136 56.417 1.00 44.65 C
ATOM 22 N2 G B2113 107.195 102.465 57.122 1.00 45.31 N
ATOM 23 N3 G B2113 105.748 100.869 56.322 1.00 43.63 N
ATOM 24 C4 G B2113 104.637 100.712 55.579 1.00 44.27 C
ATOM 25 P C B2114 101.687 97.130 59.482 1.00 48.00 P
ATOM 26 OP1 C B2114 101.393 96.084 60.497 1.00 47.52 O
ATOM 27 OP2 C B2114 100.573 97.938 58.920 1.00 47.83 O
ATOM 28 O5' C B2114 102.755 98.138 60.095 1.00 46.62 O
TER
ATOM 2 P A A1888 116.677 94.793 55.282 1.00 76.81 P
ATOM 3 OP1 A A1888 117.988 95.440 55.556 1.00 76.97 O
ATOM 4 OP2 A A1888 116.036 93.978 56.339 1.00 76.54 O
ATOM 5 O5' A A1888 115.669 95.946 54.841 1.00 72.74 O
ATOM 6 C5' A A1888 116.094 96.962 53.914 1.00 66.67 C
ATOM 7 C4' A A1888 115.190 98.170 53.988 1.00 61.31 C
ATOM 8 O4' A A1888 113.934 97.911 53.318 1.00 60.89 O
ATOM 9 C3' A A1888 114.782 98.638 55.370 1.00 59.01 C
ATOM 10 O3' A A1888 115.825 99.385 55.973 1.00 57.20 O
ATOM 11 C2' A A1888 113.553 99.481 55.055 1.00 59.41 C
ATOM 12 O2' A A1888 113.880 100.745 54.511 1.00 59.52 O
ATOM 13 C1' A A1888 112.902 98.653 53.946 1.00 59.76 C
ATOM 14 N9 A A1888 111.893 97.712 54.432 1.00 59.74 N
ATOM 15 C8 A A1888 112.063 96.397 54.800 1.00 59.74 C
ATOM 16 N7 A A1888 110.956 95.805 55.177 1.00 59.37 N
ATOM 17 C5 A A1888 109.993 96.797 55.057 1.00 58.63 C
ATOM 18 C6 A A1888 108.617 96.808 55.311 1.00 58.16 C
ATOM 19 N6 A A1888 107.941 95.753 55.770 1.00 57.02 N
ATOM 20 N1 A A1888 107.947 97.957 55.081 1.00 58.76 N
ATOM 21 C2 A A1888 108.628 99.022 54.638 1.00 58.02 C
ATOM 22 N3 A A1888 109.922 99.138 54.371 1.00 58.16 N
ATOM 23 C4 A A1888 110.557 97.977 54.602 1.00 58.79 C
ATOM 24 P A A1889 116.024 99.340 57.567 1.00 56.83 P
ATOM 25 OP1 A A1889 117.344 99.975 57.840 1.00 54.63 O
ATOM 26 OP2 A A1889 115.752 97.969 58.076 1.00 55.05 O
ATOM 27 O5' A A1889 114.866 100.288 58.116 1.00 54.69 O
TER
ATOM 1 O3' A B2112 100.313 96.741 52.320 1.00 47.52 O
ATOM 2 P G B2113 99.703 97.055 53.768 1.00 48.68 P
ATOM 3 OP1 G B2113 98.892 95.862 54.146 1.00 48.13 O
ATOM 4 OP2 G B2113 99.064 98.390 53.729 1.00 48.50 O
ATOM 5 O5' G B2113 100.983 97.157 54.714 1.00 47.77 O
ATOM 6 C5' G B2113 101.723 95.980 55.102 1.00 45.91 C
ATOM 7 C4' G B2113 102.970 96.373 55.856 1.00 45.39 C
ATOM 8 O4' G B2113 103.782 97.211 54.996 1.00 44.77 O
ATOM 9 C3' G B2113 102.752 97.227 57.095 1.00 46.07 C
ATOM 10 O3' G B2113 102.451 96.449 58.245 1.00 46.39 O
ATOM 11 C2' G B2113 104.085 97.944 57.238 1.00 46.19 C
ATOM 12 O2' G B2113 105.075 97.132 57.832 1.00 47.31 O
ATOM 13 C1' G B2113 104.438 98.201 55.772 1.00 45.40 C
ATOM 14 N9 G B2113 104.014 99.519 55.305 1.00 44.58 N
ATOM 15 C8 G B2113 102.925 99.821 54.520 1.00 45.28 C
ATOM 16 N7 G B2113 102.807 101.100 54.280 1.00 46.21 N
ATOM 17 C5 G B2113 103.882 101.675 54.945 1.00 45.63 C
ATOM 18 C6 G B2113 104.277 103.036 55.054 1.00 46.03 C
ATOM 19 O6 G B2113 103.744 104.038 54.562 1.00 46.62 O
ATOM 20 N1 G B2113 105.423 103.172 55.830 1.00 45.05 N
ATOM 21 C2 G B2113 106.105 102.136 56.417 1.00 44.65 C
ATOM 22 N2 G B2113 107.195 102.465 57.122 1.00 45.31 N
ATOM 23 N3 G B2113 105.748 100.869 56.322 1.00 43.63 N
ATOM 24 C4 G B2113 104.637 100.712 55.579 1.00 44.27 C
ATOM 25 P C B2114 101.687 97.130 59.482 1.00 48.00 P
ATOM 26 OP1 C B2114 101.393 96.084 60.497 1.00 47.52 O
ATOM 27 OP2 C B2114 100.573 97.938 58.920 1.00 47.83 O
ATOM 28 O5' C B2114 102.755 98.138 60.095 1.00 46.62 O
TER
Atoms:
OP1: (117.988,95.440,55.556)
OP2: (116.036,93.978,56.339)
C3': (114.782,98.638,55.370)
C1': (112.902,98.653,53.946)
C5': (116.094,96.962,53.914)
O4': (113.934,97.911,53.318)
C8: (112.063,96.397,54.800)
O2': (113.880,100.745,54.511)
C6: (108.617,96.808,55.311)
C5: (109.993,96.797,55.057)
C4: (110.557,97.977,54.602)
P: (116.677,94.793,55.282)
C4': (115.190,98.170,53.988)
C2': (113.553,99.481,55.055)
C2: (108.628,99.022,54.638)
N1: (107.947,97.957,55.081)
N3: (109.922,99.138,54.371)
N6: (107.941,95.753,55.770)
N7: (110.956,95.805,55.177)
N9: (111.893,97.712,54.432)
O5': (115.669,95.946,54.841)
O3': (115.825,99.385,55.973)
OP2: (116.036,93.978,56.339)
C3': (114.782,98.638,55.370)
C1': (112.902,98.653,53.946)
C5': (116.094,96.962,53.914)
O4': (113.934,97.911,53.318)
C8: (112.063,96.397,54.800)
O2': (113.880,100.745,54.511)
C6: (108.617,96.808,55.311)
C5: (109.993,96.797,55.057)
C4: (110.557,97.977,54.602)
P: (116.677,94.793,55.282)
C4': (115.190,98.170,53.988)
C2': (113.553,99.481,55.055)
C2: (108.628,99.022,54.638)
N1: (107.947,97.957,55.081)
N3: (109.922,99.138,54.371)
N6: (107.941,95.753,55.770)
N7: (110.956,95.805,55.177)
N9: (111.893,97.712,54.432)
O5': (115.669,95.946,54.841)
O3': (115.825,99.385,55.973)
OP1: (98.892,95.862,54.146)
OP2: (99.064,98.390,53.729)
C3': (102.752,97.227,57.095)
C1': (104.438,98.201,55.772)
C5': (101.723,95.980,55.102)
O6: (103.744,104.038,54.562)
O4': (103.782,97.211,54.996)
C8: (102.925,99.821,54.520)
C2: (106.105,102.136,56.417)
C6: (104.277,103.036,55.054)
C5: (103.882,101.675,54.945)
C4: (104.637,100.712,55.579)
P: (99.703,97.055,53.768)
C4': (102.970,96.373,55.856)
C2': (104.085,97.944,57.238)
O2': (105.075,97.132,57.832)
N1: (105.423,103.172,55.830)
N2: (107.195,102.465,57.122)
N3: (105.748,100.869,56.322)
N7: (102.807,101.100,54.280)
N9: (104.014,99.519,55.305)
O5': (100.983,97.157,54.714)
O3': (102.451,96.449,58.245)
OP2: (99.064,98.390,53.729)
C3': (102.752,97.227,57.095)
C1': (104.438,98.201,55.772)
C5': (101.723,95.980,55.102)
O6: (103.744,104.038,54.562)
O4': (103.782,97.211,54.996)
C8: (102.925,99.821,54.520)
C2: (106.105,102.136,56.417)
C6: (104.277,103.036,55.054)
C5: (103.882,101.675,54.945)
C4: (104.637,100.712,55.579)
P: (99.703,97.055,53.768)
C4': (102.970,96.373,55.856)
C2': (104.085,97.944,57.238)
O2': (105.075,97.132,57.832)
N1: (105.423,103.172,55.830)
N2: (107.195,102.465,57.122)
N3: (105.748,100.869,56.322)
N7: (102.807,101.100,54.280)
N9: (104.014,99.519,55.305)
O5': (100.983,97.157,54.714)
O3': (102.451,96.449,58.245)
Image (generated by PyMOL):