Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0219:0653
Extra
PDB:
ATOM 1 O3' C A 218 53.652 91.307 23.479 1.00 41.22 O
ATOM 2 P G A 219 53.184 92.401 22.406 1.00 42.64 P
ATOM 3 OP1 G A 219 52.441 91.680 21.348 1.00 44.56 O
ATOM 4 OP2 G A 219 54.346 93.243 22.041 1.00 45.02 O
ATOM 5 O5' G A 219 52.152 93.306 23.202 1.00 39.75 O
ATOM 6 C5' G A 219 50.939 92.752 23.712 1.00 38.15 C
ATOM 7 C4' G A 219 50.202 93.791 24.507 1.00 38.53 C
ATOM 8 O4' G A 219 50.941 94.110 25.711 1.00 38.73 O
ATOM 9 C3' G A 219 50.065 95.122 23.803 1.00 38.46 C
ATOM 10 O3' G A 219 48.989 95.093 22.886 1.00 42.60 O
ATOM 11 C2' G A 219 49.858 96.085 24.964 1.00 37.63 C
ATOM 12 O2' G A 219 48.549 96.062 25.484 1.00 35.37 O
ATOM 13 C1' G A 219 50.798 95.487 26.006 1.00 37.14 C
ATOM 14 N9 G A 219 52.123 96.094 26.022 1.00 37.10 N
ATOM 15 C8 G A 219 53.293 95.567 25.526 1.00 36.88 C
ATOM 16 N7 G A 219 54.330 96.330 25.741 1.00 37.96 N
ATOM 17 C5 G A 219 53.812 97.433 26.410 1.00 38.01 C
ATOM 18 C6 G A 219 54.458 98.593 26.921 1.00 36.76 C
ATOM 19 O6 G A 219 55.656 98.891 26.877 1.00 35.12 O
ATOM 20 N1 G A 219 53.550 99.454 27.532 1.00 35.25 N
ATOM 21 C2 G A 219 52.199 99.237 27.631 1.00 35.89 C
ATOM 22 N2 G A 219 51.483 100.190 28.232 1.00 37.33 N
ATOM 23 N3 G A 219 51.589 98.164 27.168 1.00 37.72 N
ATOM 24 C4 G A 219 52.449 97.308 26.575 1.00 38.30 C
ATOM 25 P A A 220 48.879 96.231 21.766 1.00 44.63 P
ATOM 26 OP1 A A 220 47.585 96.061 21.047 1.00 42.84 O
ATOM 27 OP2 A A 220 50.163 96.245 21.006 1.00 42.44 O
ATOM 28 O5' A A 220 48.767 97.556 22.632 1.00 42.97 O
TER
ATOM 1 O3' U B 652 40.443 97.613 34.479 1.00 39.20 O
ATOM 2 P A B 653 40.981 99.003 33.882 1.00 38.78 P
ATOM 3 OP1 A B 653 40.696 100.046 34.894 1.00 39.09 O
ATOM 4 OP2 A B 653 40.450 99.154 32.502 1.00 39.05 O
ATOM 5 O5' A B 653 42.560 98.792 33.798 1.00 36.99 O
ATOM 6 C5' A B 653 43.354 98.768 34.994 1.00 36.40 C
ATOM 7 C4' A B 653 44.818 98.942 34.669 1.00 37.76 C
ATOM 8 O4' A B 653 45.388 97.720 34.143 1.00 38.71 O
ATOM 9 C3' A B 653 45.162 99.991 33.631 1.00 37.03 C
ATOM 10 O3' A B 653 45.148 101.283 34.200 1.00 36.21 O
ATOM 11 C2' A B 653 46.556 99.568 33.200 1.00 37.52 C
ATOM 12 O2' A B 653 47.551 99.956 34.123 1.00 37.09 O
ATOM 13 C1' A B 653 46.425 98.044 33.230 1.00 39.37 C
ATOM 14 N9 A B 653 46.094 97.450 31.936 1.00 41.13 N
ATOM 15 C8 A B 653 44.864 97.037 31.489 1.00 40.79 C
ATOM 16 N7 A B 653 44.895 96.473 30.307 1.00 42.93 N
ATOM 17 C5 A B 653 46.234 96.530 29.945 1.00 42.78 C
ATOM 18 C6 A B 653 46.925 96.075 28.811 1.00 42.74 C
ATOM 19 N6 A B 653 46.343 95.422 27.808 1.00 42.22 N
ATOM 20 N1 A B 653 48.254 96.307 28.749 1.00 42.73 N
ATOM 21 C2 A B 653 48.840 96.938 29.774 1.00 42.23 C
ATOM 22 N3 A B 653 48.300 97.394 30.902 1.00 40.33 N
ATOM 23 C4 A B 653 46.979 97.154 30.927 1.00 41.51 C
ATOM 24 P A B 654 44.569 102.510 33.356 1.00 38.69 P
ATOM 25 OP1 A B 654 44.412 103.635 34.308 1.00 36.30 O
ATOM 26 OP2 A B 654 43.394 102.039 32.582 1.00 38.49 O
ATOM 27 O5' A B 654 45.746 102.845 32.330 1.00 38.54 O
TER
ATOM 2 P G A 219 53.184 92.401 22.406 1.00 42.64 P
ATOM 3 OP1 G A 219 52.441 91.680 21.348 1.00 44.56 O
ATOM 4 OP2 G A 219 54.346 93.243 22.041 1.00 45.02 O
ATOM 5 O5' G A 219 52.152 93.306 23.202 1.00 39.75 O
ATOM 6 C5' G A 219 50.939 92.752 23.712 1.00 38.15 C
ATOM 7 C4' G A 219 50.202 93.791 24.507 1.00 38.53 C
ATOM 8 O4' G A 219 50.941 94.110 25.711 1.00 38.73 O
ATOM 9 C3' G A 219 50.065 95.122 23.803 1.00 38.46 C
ATOM 10 O3' G A 219 48.989 95.093 22.886 1.00 42.60 O
ATOM 11 C2' G A 219 49.858 96.085 24.964 1.00 37.63 C
ATOM 12 O2' G A 219 48.549 96.062 25.484 1.00 35.37 O
ATOM 13 C1' G A 219 50.798 95.487 26.006 1.00 37.14 C
ATOM 14 N9 G A 219 52.123 96.094 26.022 1.00 37.10 N
ATOM 15 C8 G A 219 53.293 95.567 25.526 1.00 36.88 C
ATOM 16 N7 G A 219 54.330 96.330 25.741 1.00 37.96 N
ATOM 17 C5 G A 219 53.812 97.433 26.410 1.00 38.01 C
ATOM 18 C6 G A 219 54.458 98.593 26.921 1.00 36.76 C
ATOM 19 O6 G A 219 55.656 98.891 26.877 1.00 35.12 O
ATOM 20 N1 G A 219 53.550 99.454 27.532 1.00 35.25 N
ATOM 21 C2 G A 219 52.199 99.237 27.631 1.00 35.89 C
ATOM 22 N2 G A 219 51.483 100.190 28.232 1.00 37.33 N
ATOM 23 N3 G A 219 51.589 98.164 27.168 1.00 37.72 N
ATOM 24 C4 G A 219 52.449 97.308 26.575 1.00 38.30 C
ATOM 25 P A A 220 48.879 96.231 21.766 1.00 44.63 P
ATOM 26 OP1 A A 220 47.585 96.061 21.047 1.00 42.84 O
ATOM 27 OP2 A A 220 50.163 96.245 21.006 1.00 42.44 O
ATOM 28 O5' A A 220 48.767 97.556 22.632 1.00 42.97 O
TER
ATOM 1 O3' U B 652 40.443 97.613 34.479 1.00 39.20 O
ATOM 2 P A B 653 40.981 99.003 33.882 1.00 38.78 P
ATOM 3 OP1 A B 653 40.696 100.046 34.894 1.00 39.09 O
ATOM 4 OP2 A B 653 40.450 99.154 32.502 1.00 39.05 O
ATOM 5 O5' A B 653 42.560 98.792 33.798 1.00 36.99 O
ATOM 6 C5' A B 653 43.354 98.768 34.994 1.00 36.40 C
ATOM 7 C4' A B 653 44.818 98.942 34.669 1.00 37.76 C
ATOM 8 O4' A B 653 45.388 97.720 34.143 1.00 38.71 O
ATOM 9 C3' A B 653 45.162 99.991 33.631 1.00 37.03 C
ATOM 10 O3' A B 653 45.148 101.283 34.200 1.00 36.21 O
ATOM 11 C2' A B 653 46.556 99.568 33.200 1.00 37.52 C
ATOM 12 O2' A B 653 47.551 99.956 34.123 1.00 37.09 O
ATOM 13 C1' A B 653 46.425 98.044 33.230 1.00 39.37 C
ATOM 14 N9 A B 653 46.094 97.450 31.936 1.00 41.13 N
ATOM 15 C8 A B 653 44.864 97.037 31.489 1.00 40.79 C
ATOM 16 N7 A B 653 44.895 96.473 30.307 1.00 42.93 N
ATOM 17 C5 A B 653 46.234 96.530 29.945 1.00 42.78 C
ATOM 18 C6 A B 653 46.925 96.075 28.811 1.00 42.74 C
ATOM 19 N6 A B 653 46.343 95.422 27.808 1.00 42.22 N
ATOM 20 N1 A B 653 48.254 96.307 28.749 1.00 42.73 N
ATOM 21 C2 A B 653 48.840 96.938 29.774 1.00 42.23 C
ATOM 22 N3 A B 653 48.300 97.394 30.902 1.00 40.33 N
ATOM 23 C4 A B 653 46.979 97.154 30.927 1.00 41.51 C
ATOM 24 P A B 654 44.569 102.510 33.356 1.00 38.69 P
ATOM 25 OP1 A B 654 44.412 103.635 34.308 1.00 36.30 O
ATOM 26 OP2 A B 654 43.394 102.039 32.582 1.00 38.49 O
ATOM 27 O5' A B 654 45.746 102.845 32.330 1.00 38.54 O
TER
Atoms:
OP1: (52.441,91.680,21.348)
OP2: (54.346,93.243,22.041)
C3': (50.065,95.122,23.803)
C1': (50.798,95.487,26.006)
C5': (50.939,92.752,23.712)
O6: (55.656,98.891,26.877)
O4': (50.941,94.110,25.711)
C8: (53.293,95.567,25.526)
C2: (52.199,99.237,27.631)
C6: (54.458,98.593,26.921)
C5: (53.812,97.433,26.410)
C4: (52.449,97.308,26.575)
P: (53.184,92.401,22.406)
C4': (50.202,93.791,24.507)
C2': (49.858,96.085,24.964)
O2': (48.549,96.062,25.484)
N1: (53.550,99.454,27.532)
N2: (51.483,100.190,28.232)
N3: (51.589,98.164,27.168)
N7: (54.330,96.330,25.741)
N9: (52.123,96.094,26.022)
O5': (52.152,93.306,23.202)
O3': (48.989,95.093,22.886)
OP2: (54.346,93.243,22.041)
C3': (50.065,95.122,23.803)
C1': (50.798,95.487,26.006)
C5': (50.939,92.752,23.712)
O6: (55.656,98.891,26.877)
O4': (50.941,94.110,25.711)
C8: (53.293,95.567,25.526)
C2: (52.199,99.237,27.631)
C6: (54.458,98.593,26.921)
C5: (53.812,97.433,26.410)
C4: (52.449,97.308,26.575)
P: (53.184,92.401,22.406)
C4': (50.202,93.791,24.507)
C2': (49.858,96.085,24.964)
O2': (48.549,96.062,25.484)
N1: (53.550,99.454,27.532)
N2: (51.483,100.190,28.232)
N3: (51.589,98.164,27.168)
N7: (54.330,96.330,25.741)
N9: (52.123,96.094,26.022)
O5': (52.152,93.306,23.202)
O3': (48.989,95.093,22.886)
OP1: (40.696,100.046,34.894)
OP2: (40.450,99.154,32.502)
C3': (45.162,99.991,33.631)
C1': (46.425,98.044,33.230)
C5': (43.354,98.768,34.994)
O4': (45.388,97.720,34.143)
C8: (44.864,97.037,31.489)
O2': (47.551,99.956,34.123)
C6: (46.925,96.075,28.811)
C5: (46.234,96.530,29.945)
C4: (46.979,97.154,30.927)
P: (40.981,99.003,33.882)
C4': (44.818,98.942,34.669)
C2': (46.556,99.568,33.200)
C2: (48.840,96.938,29.774)
N1: (48.254,96.307,28.749)
N3: (48.300,97.394,30.902)
N6: (46.343,95.422,27.808)
N7: (44.895,96.473,30.307)
N9: (46.094,97.450,31.936)
O5': (42.560,98.792,33.798)
O3': (45.148,101.283,34.200)
OP2: (40.450,99.154,32.502)
C3': (45.162,99.991,33.631)
C1': (46.425,98.044,33.230)
C5': (43.354,98.768,34.994)
O4': (45.388,97.720,34.143)
C8: (44.864,97.037,31.489)
O2': (47.551,99.956,34.123)
C6: (46.925,96.075,28.811)
C5: (46.234,96.530,29.945)
C4: (46.979,97.154,30.927)
P: (40.981,99.003,33.882)
C4': (44.818,98.942,34.669)
C2': (46.556,99.568,33.200)
C2: (48.840,96.938,29.774)
N1: (48.254,96.307,28.749)
N3: (48.300,97.394,30.902)
N6: (46.343,95.422,27.808)
N7: (44.895,96.473,30.307)
N9: (46.094,97.450,31.936)
O5': (42.560,98.792,33.798)
O3': (45.148,101.283,34.200)
Image (generated by PyMOL):