ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01034:01056

Extra

PDB:
ATOM 1 O3' G A1033 23.691 105.882 101.160 1.00 44.77 O
ATOM 2 P G A1034 24.253 106.398 102.583 1.00 46.05 P
ATOM 3 OP1 G A1034 23.433 107.559 103.028 1.00 45.03 O
ATOM 4 OP2 G A1034 25.733 106.541 102.508 1.00 45.91 O
ATOM 5 O5' G A1034 23.989 105.158 103.545 1.00 45.32 O
ATOM 6 C5' G A1034 22.675 104.829 104.000 1.00 43.23 C
ATOM 7 C4' G A1034 22.743 103.740 105.047 1.00 43.01 C
ATOM 8 O4' G A1034 23.280 102.523 104.459 1.00 44.12 O
ATOM 9 C3' G A1034 23.665 103.970 106.233 1.00 43.26 C
ATOM 10 O3' G A1034 23.126 104.842 107.210 1.00 43.84 O
ATOM 11 C2' G A1034 23.813 102.553 106.754 1.00 44.92 C
ATOM 12 O2' G A1034 22.615 102.098 107.360 1.00 47.40 O
ATOM 13 C1' G A1034 23.999 101.792 105.444 1.00 44.59 C
ATOM 14 N9 G A1034 25.408 101.725 105.053 1.00 45.56 N
ATOM 15 C8 G A1034 26.027 102.419 104.039 1.00 45.77 C
ATOM 16 N7 G A1034 27.298 102.145 103.930 1.00 46.15 N
ATOM 17 C5 G A1034 27.536 101.212 104.929 1.00 47.56 C
ATOM 18 C6 G A1034 28.731 100.538 105.294 1.00 48.29 C
ATOM 19 O6 G A1034 29.850 100.611 104.774 1.00 51.05 O
ATOM 20 N1 G A1034 28.531 99.699 106.378 1.00 47.25 N
ATOM 21 C2 G A1034 27.339 99.511 107.018 1.00 47.12 C
ATOM 22 N2 G A1034 27.361 98.658 108.039 1.00 48.04 N
ATOM 23 N3 G A1034 26.213 100.113 106.682 1.00 47.12 N
ATOM 24 C4 G A1034 26.383 100.948 105.637 1.00 46.80 C
ATOM 25 P G A1035 24.110 105.794 108.055 1.00 45.36 P
ATOM 26 OP1 G A1035 23.242 106.519 109.013 1.00 46.24 O
ATOM 27 OP2 G A1035 24.965 106.559 107.127 1.00 45.37 O
ATOM 28 O5' G A1035 25.046 104.789 108.873 1.00 46.36 O
TER

ATOM 1 O3' U B1055 15.834 92.632 111.270 1.00 42.40 O
ATOM 2 P A B1056 17.184 92.878 112.087 1.00 43.31 P
ATOM 3 OP1 A B1056 17.429 91.650 112.884 1.00 41.71 O
ATOM 4 OP2 A B1056 17.055 94.189 112.770 1.00 38.98 O
ATOM 5 O5' A B1056 18.300 93.008 110.956 1.00 42.57 O
ATOM 6 C5' A B1056 18.749 91.860 110.206 1.00 43.71 C
ATOM 7 C4' A B1056 20.019 92.193 109.448 1.00 43.98 C
ATOM 8 O4' A B1056 19.732 93.171 108.415 1.00 42.75 O
ATOM 9 C3' A B1056 21.134 92.831 110.270 1.00 44.29 C
ATOM 10 O3' A B1056 21.907 91.845 110.958 1.00 42.73 O
ATOM 11 C2' A B1056 21.949 93.556 109.207 1.00 44.69 C
ATOM 12 O2' A B1056 22.812 92.681 108.513 1.00 46.85 O
ATOM 13 C1' A B1056 20.854 94.019 108.240 1.00 44.12 C
ATOM 14 N9 A B1056 20.433 95.417 108.397 1.00 44.70 N
ATOM 15 C8 A B1056 19.331 95.925 109.048 1.00 44.85 C
ATOM 16 N7 A B1056 19.227 97.233 108.973 1.00 44.89 N
ATOM 17 C5 A B1056 20.338 97.613 108.232 1.00 45.23 C
ATOM 18 C6 A B1056 20.810 98.870 107.799 1.00 45.37 C
ATOM 19 N6 A B1056 20.203 100.025 108.060 1.00 45.07 N
ATOM 20 N1 A B1056 21.949 98.897 107.078 1.00 46.10 N
ATOM 21 C2 A B1056 22.568 97.741 106.815 1.00 45.46 C
ATOM 22 N3 A B1056 22.229 96.504 107.163 1.00 44.94 N
ATOM 23 C4 A B1056 21.092 96.507 107.877 1.00 44.85 C
ATOM 24 P A B1057 22.462 92.152 112.433 1.00 43.82 P
ATOM 25 OP1 A B1057 23.016 90.887 112.973 1.00 40.87 O
ATOM 26 OP2 A B1057 21.414 92.864 113.186 1.00 44.48 O
ATOM 27 O5' A B1057 23.643 93.189 112.190 1.00 42.66 O
TER

Atoms:
OP1: (23.433,107.559,103.028)
OP2: (25.733,106.541,102.508)
C3': (23.665,103.970,106.233)
C1': (23.999,101.792,105.444)
C5': (22.675,104.829,104.000)
O6: (29.850,100.611,104.774)
O4': (23.280,102.523,104.459)
C8: (26.027,102.419,104.039)
C2: (27.339,99.511,107.018)
C6: (28.731,100.538,105.294)
C5: (27.536,101.212,104.929)
C4: (26.383,100.948,105.637)
P: (24.253,106.398,102.583)
C4': (22.743,103.740,105.047)
C2': (23.813,102.553,106.754)
O2': (22.615,102.098,107.360)
N1: (28.531,99.699,106.378)
N2: (27.361,98.658,108.039)
N3: (26.213,100.113,106.682)
N7: (27.298,102.145,103.930)
N9: (25.408,101.725,105.053)
O5': (23.989,105.158,103.545)
O3': (23.126,104.842,107.210)
OP1: (17.429,91.650,112.884)
OP2: (17.055,94.189,112.770)
C3': (21.134,92.831,110.270)
C1': (20.854,94.019,108.240)
C5': (18.749,91.860,110.206)
O4': (19.732,93.171,108.415)
C8: (19.331,95.925,109.048)
O2': (22.812,92.681,108.513)
C6: (20.810,98.870,107.799)
C5: (20.338,97.613,108.232)
C4: (21.092,96.507,107.877)
P: (17.184,92.878,112.087)
C4': (20.019,92.193,109.448)
C2': (21.949,93.556,109.207)
C2: (22.568,97.741,106.815)
N1: (21.949,98.897,107.078)
N3: (22.229,96.504,107.163)
N6: (20.203,100.025,108.060)
N7: (19.227,97.233,108.973)
N9: (20.433,95.417,108.397)
O5': (18.300,93.008,110.956)
O3': (21.907,91.845,110.958)
Image (generated by PyMOL):
PyMOL image
show in jmol