Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01888:02113
Extra
PDB:
ATOM 1 O3' G A1887 117.436 94.349 54.509 1.00 87.92 O
ATOM 2 P A A1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 3 OP1 A A1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 4 OP2 A A1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 5 O5' A A1888 116.111 96.323 55.380 1.00 83.84 O
ATOM 6 C5' A A1888 116.502 97.356 54.439 1.00 79.27 C
ATOM 7 C4' A A1888 115.555 98.544 54.492 1.00 75.24 C
ATOM 8 O4' A A1888 114.319 98.259 53.791 1.00 75.02 O
ATOM 9 C3' A A1888 115.108 99.043 55.857 1.00 72.30 C
ATOM 10 O3' A A1888 116.112 99.843 56.462 1.00 69.69 O
ATOM 11 C2' A A1888 113.863 99.850 55.503 1.00 72.59 C
ATOM 12 O2' A A1888 114.158 101.125 54.969 1.00 71.98 O
ATOM 13 C1' A A1888 113.260 99.001 54.382 1.00 73.74 C
ATOM 14 N9 A A1888 112.233 98.066 54.846 1.00 73.79 N
ATOM 15 C8 A A1888 112.374 96.742 55.198 1.00 74.46 C
ATOM 16 N7 A A1888 111.254 96.173 55.578 1.00 74.34 N
ATOM 17 C5 A A1888 110.314 97.190 55.473 1.00 73.10 C
ATOM 18 C6 A A1888 108.938 97.233 55.738 1.00 71.78 C
ATOM 19 N6 A A1888 108.239 96.197 56.201 1.00 70.89 N
ATOM 20 N1 A A1888 108.295 98.397 55.517 1.00 72.72 N
ATOM 21 C2 A A1888 108.996 99.445 55.071 1.00 73.17 C
ATOM 22 N3 A A1888 110.292 99.533 54.794 1.00 73.59 N
ATOM 23 C4 A A1888 110.903 98.358 55.018 1.00 73.38 C
ATOM 24 P A A1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 25 OP1 A A1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 26 OP2 A A1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 27 O5' A A1889 115.223 100.742 58.638 1.00 68.28 O
TER
ATOM 1 O3' A B2112 100.581 97.122 52.700 1.00 60.88 O
ATOM 2 P G B2113 99.967 97.365 54.161 1.00 61.56 P
ATOM 3 OP1 G B2113 99.248 96.112 54.520 1.00 61.26 O
ATOM 4 OP2 G B2113 99.235 98.656 54.163 1.00 61.86 O
ATOM 5 O5' G B2113 101.248 97.506 55.101 1.00 60.19 O
ATOM 6 C5' G B2113 101.992 96.343 55.519 1.00 58.14 C
ATOM 7 C4' G B2113 103.226 96.757 56.281 1.00 57.37 C
ATOM 8 O4' G B2113 104.036 97.606 55.428 1.00 57.34 O
ATOM 9 C3' G B2113 102.987 97.614 57.510 1.00 57.54 C
ATOM 10 O3' G B2113 102.657 96.839 58.652 1.00 57.84 O
ATOM 11 C2' G B2113 104.319 98.333 57.671 1.00 57.70 C
ATOM 12 O2' G B2113 105.316 97.528 58.264 1.00 58.39 O
ATOM 13 C1' G B2113 104.690 98.592 56.211 1.00 56.66 C
ATOM 14 N9 G B2113 104.288 99.915 55.736 1.00 55.88 N
ATOM 15 C8 G B2113 103.211 100.225 54.943 1.00 55.61 C
ATOM 16 N7 G B2113 103.114 101.502 54.688 1.00 56.30 N
ATOM 17 C5 G B2113 104.190 102.070 55.355 1.00 55.96 C
ATOM 18 C6 G B2113 104.605 103.424 55.445 1.00 57.63 C
ATOM 19 O6 G B2113 104.086 104.427 54.938 1.00 60.57 O
ATOM 20 N1 G B2113 105.751 103.557 56.218 1.00 56.74 N
ATOM 21 C2 G B2113 106.416 102.526 56.825 1.00 56.37 C
ATOM 22 N2 G B2113 107.507 102.867 57.524 1.00 56.49 N
ATOM 23 N3 G B2113 106.042 101.258 56.751 1.00 55.53 N
ATOM 24 C4 G B2113 104.927 101.105 56.005 1.00 55.63 C
ATOM 25 P C B2114 101.902 97.534 59.886 1.00 57.47 P
ATOM 26 OP1 C B2114 101.590 96.499 60.908 1.00 56.90 O
ATOM 27 OP2 C B2114 100.806 98.352 59.314 1.00 58.63 O
ATOM 28 O5' C B2114 102.996 98.519 60.486 1.00 56.89 O
TER
ATOM 2 P A A1888 117.161 95.210 55.849 1.00 87.31 P
ATOM 3 OP1 A A1888 118.432 95.904 56.201 1.00 87.35 O
ATOM 4 OP2 A A1888 116.514 94.334 56.858 1.00 86.90 O
ATOM 5 O5' A A1888 116.111 96.323 55.380 1.00 83.84 O
ATOM 6 C5' A A1888 116.502 97.356 54.439 1.00 79.27 C
ATOM 7 C4' A A1888 115.555 98.544 54.492 1.00 75.24 C
ATOM 8 O4' A A1888 114.319 98.259 53.791 1.00 75.02 O
ATOM 9 C3' A A1888 115.108 99.043 55.857 1.00 72.30 C
ATOM 10 O3' A A1888 116.112 99.843 56.462 1.00 69.69 O
ATOM 11 C2' A A1888 113.863 99.850 55.503 1.00 72.59 C
ATOM 12 O2' A A1888 114.158 101.125 54.969 1.00 71.98 O
ATOM 13 C1' A A1888 113.260 99.001 54.382 1.00 73.74 C
ATOM 14 N9 A A1888 112.233 98.066 54.846 1.00 73.79 N
ATOM 15 C8 A A1888 112.374 96.742 55.198 1.00 74.46 C
ATOM 16 N7 A A1888 111.254 96.173 55.578 1.00 74.34 N
ATOM 17 C5 A A1888 110.314 97.190 55.473 1.00 73.10 C
ATOM 18 C6 A A1888 108.938 97.233 55.738 1.00 71.78 C
ATOM 19 N6 A A1888 108.239 96.197 56.201 1.00 70.89 N
ATOM 20 N1 A A1888 108.295 98.397 55.517 1.00 72.72 N
ATOM 21 C2 A A1888 108.996 99.445 55.071 1.00 73.17 C
ATOM 22 N3 A A1888 110.292 99.533 54.794 1.00 73.59 N
ATOM 23 C4 A A1888 110.903 98.358 55.018 1.00 73.38 C
ATOM 24 P A A1889 116.342 99.773 58.051 1.00 69.38 P
ATOM 25 OP1 A A1889 117.679 100.364 58.336 1.00 68.44 O
ATOM 26 OP2 A A1889 116.036 98.399 58.525 1.00 69.16 O
ATOM 27 O5' A A1889 115.223 100.742 58.638 1.00 68.28 O
TER
ATOM 1 O3' A B2112 100.581 97.122 52.700 1.00 60.88 O
ATOM 2 P G B2113 99.967 97.365 54.161 1.00 61.56 P
ATOM 3 OP1 G B2113 99.248 96.112 54.520 1.00 61.26 O
ATOM 4 OP2 G B2113 99.235 98.656 54.163 1.00 61.86 O
ATOM 5 O5' G B2113 101.248 97.506 55.101 1.00 60.19 O
ATOM 6 C5' G B2113 101.992 96.343 55.519 1.00 58.14 C
ATOM 7 C4' G B2113 103.226 96.757 56.281 1.00 57.37 C
ATOM 8 O4' G B2113 104.036 97.606 55.428 1.00 57.34 O
ATOM 9 C3' G B2113 102.987 97.614 57.510 1.00 57.54 C
ATOM 10 O3' G B2113 102.657 96.839 58.652 1.00 57.84 O
ATOM 11 C2' G B2113 104.319 98.333 57.671 1.00 57.70 C
ATOM 12 O2' G B2113 105.316 97.528 58.264 1.00 58.39 O
ATOM 13 C1' G B2113 104.690 98.592 56.211 1.00 56.66 C
ATOM 14 N9 G B2113 104.288 99.915 55.736 1.00 55.88 N
ATOM 15 C8 G B2113 103.211 100.225 54.943 1.00 55.61 C
ATOM 16 N7 G B2113 103.114 101.502 54.688 1.00 56.30 N
ATOM 17 C5 G B2113 104.190 102.070 55.355 1.00 55.96 C
ATOM 18 C6 G B2113 104.605 103.424 55.445 1.00 57.63 C
ATOM 19 O6 G B2113 104.086 104.427 54.938 1.00 60.57 O
ATOM 20 N1 G B2113 105.751 103.557 56.218 1.00 56.74 N
ATOM 21 C2 G B2113 106.416 102.526 56.825 1.00 56.37 C
ATOM 22 N2 G B2113 107.507 102.867 57.524 1.00 56.49 N
ATOM 23 N3 G B2113 106.042 101.258 56.751 1.00 55.53 N
ATOM 24 C4 G B2113 104.927 101.105 56.005 1.00 55.63 C
ATOM 25 P C B2114 101.902 97.534 59.886 1.00 57.47 P
ATOM 26 OP1 C B2114 101.590 96.499 60.908 1.00 56.90 O
ATOM 27 OP2 C B2114 100.806 98.352 59.314 1.00 58.63 O
ATOM 28 O5' C B2114 102.996 98.519 60.486 1.00 56.89 O
TER
Atoms:
OP1: (118.432,95.904,56.201)
OP2: (116.514,94.334,56.858)
C3': (115.108,99.043,55.857)
C1': (113.260,99.001,54.382)
C5': (116.502,97.356,54.439)
O4': (114.319,98.259,53.791)
C8: (112.374,96.742,55.198)
O2': (114.158,101.125,54.969)
C6: (108.938,97.233,55.738)
C5: (110.314,97.190,55.473)
C4: (110.903,98.358,55.018)
P: (117.161,95.210,55.849)
C4': (115.555,98.544,54.492)
C2': (113.863,99.850,55.503)
C2: (108.996,99.445,55.071)
N1: (108.295,98.397,55.517)
N3: (110.292,99.533,54.794)
N6: (108.239,96.197,56.201)
N7: (111.254,96.173,55.578)
N9: (112.233,98.066,54.846)
O5': (116.111,96.323,55.380)
O3': (116.112,99.843,56.462)
OP2: (116.514,94.334,56.858)
C3': (115.108,99.043,55.857)
C1': (113.260,99.001,54.382)
C5': (116.502,97.356,54.439)
O4': (114.319,98.259,53.791)
C8: (112.374,96.742,55.198)
O2': (114.158,101.125,54.969)
C6: (108.938,97.233,55.738)
C5: (110.314,97.190,55.473)
C4: (110.903,98.358,55.018)
P: (117.161,95.210,55.849)
C4': (115.555,98.544,54.492)
C2': (113.863,99.850,55.503)
C2: (108.996,99.445,55.071)
N1: (108.295,98.397,55.517)
N3: (110.292,99.533,54.794)
N6: (108.239,96.197,56.201)
N7: (111.254,96.173,55.578)
N9: (112.233,98.066,54.846)
O5': (116.111,96.323,55.380)
O3': (116.112,99.843,56.462)
OP1: (99.248,96.112,54.520)
OP2: (99.235,98.656,54.163)
C3': (102.987,97.614,57.510)
C1': (104.690,98.592,56.211)
C5': (101.992,96.343,55.519)
O6: (104.086,104.427,54.938)
O4': (104.036,97.606,55.428)
C8: (103.211,100.225,54.943)
C2: (106.416,102.526,56.825)
C6: (104.605,103.424,55.445)
C5: (104.190,102.070,55.355)
C4: (104.927,101.105,56.005)
P: (99.967,97.365,54.161)
C4': (103.226,96.757,56.281)
C2': (104.319,98.333,57.671)
O2': (105.316,97.528,58.264)
N1: (105.751,103.557,56.218)
N2: (107.507,102.867,57.524)
N3: (106.042,101.258,56.751)
N7: (103.114,101.502,54.688)
N9: (104.288,99.915,55.736)
O5': (101.248,97.506,55.101)
O3': (102.657,96.839,58.652)
OP2: (99.235,98.656,54.163)
C3': (102.987,97.614,57.510)
C1': (104.690,98.592,56.211)
C5': (101.992,96.343,55.519)
O6: (104.086,104.427,54.938)
O4': (104.036,97.606,55.428)
C8: (103.211,100.225,54.943)
C2: (106.416,102.526,56.825)
C6: (104.605,103.424,55.445)
C5: (104.190,102.070,55.355)
C4: (104.927,101.105,56.005)
P: (99.967,97.365,54.161)
C4': (103.226,96.757,56.281)
C2': (104.319,98.333,57.671)
O2': (105.316,97.528,58.264)
N1: (105.751,103.557,56.218)
N2: (107.507,102.867,57.524)
N3: (106.042,101.258,56.751)
N7: (103.114,101.502,54.688)
N9: (104.288,99.915,55.736)
O5': (101.248,97.506,55.101)
O3': (102.657,96.839,58.652)
Image (generated by PyMOL):