Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01888:02113
Extra
PDB:
ATOM 1 O3' G A1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 2 P A A1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 3 OP1 A A1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 4 OP2 A A1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 5 O5' A A1888 115.662 95.989 54.796 1.00 73.25 O
ATOM 6 C5' A A1888 116.103 97.014 53.881 1.00 69.78 C
ATOM 7 C4' A A1888 115.235 98.253 53.990 1.00 67.41 C
ATOM 8 O4' A A1888 113.970 98.050 53.312 1.00 66.99 O
ATOM 9 C3' A A1888 114.848 98.719 55.383 1.00 65.33 C
ATOM 10 O3' A A1888 115.896 99.447 56.005 1.00 63.29 O
ATOM 11 C2' A A1888 113.626 99.581 55.094 1.00 65.91 C
ATOM 12 O2' A A1888 113.961 100.853 54.574 1.00 66.98 O
ATOM 13 C1' A A1888 112.952 98.776 53.982 1.00 66.34 C
ATOM 14 N9 A A1888 111.966 97.815 54.476 1.00 66.43 N
ATOM 15 C8 A A1888 112.180 96.509 54.853 1.00 66.27 C
ATOM 16 N7 A A1888 111.093 95.883 55.235 1.00 66.25 N
ATOM 17 C5 A A1888 110.097 96.841 55.109 1.00 65.42 C
ATOM 18 C6 A A1888 108.720 96.805 55.362 1.00 63.85 C
ATOM 19 N6 A A1888 108.080 95.729 55.820 1.00 63.30 N
ATOM 20 N1 A A1888 108.012 97.928 55.133 1.00 64.37 N
ATOM 21 C2 A A1888 108.655 99.014 54.686 1.00 64.58 C
ATOM 22 N3 A A1888 109.945 99.175 54.414 1.00 65.21 N
ATOM 23 C4 A A1888 110.621 98.038 54.648 1.00 65.89 C
ATOM 24 P A A1889 116.052 99.410 57.604 1.00 62.69 P
ATOM 25 OP1 A A1889 117.360 100.025 57.952 1.00 61.37 O
ATOM 26 OP2 A A1889 115.741 98.036 58.080 1.00 63.08 O
ATOM 27 O5' A A1889 114.889 100.368 58.119 1.00 61.65 O
TER
ATOM 1 O3' A B2112 100.329 96.773 52.236 1.00 53.85 O
ATOM 2 P G B2113 99.735 97.027 53.703 1.00 54.61 P
ATOM 3 OP1 G B2113 99.005 95.784 54.075 1.00 53.97 O
ATOM 4 OP2 G B2113 99.012 98.322 53.690 1.00 54.62 O
ATOM 5 O5' G B2113 101.033 97.180 54.620 1.00 54.02 O
ATOM 6 C5' G B2113 101.772 96.020 55.062 1.00 53.30 C
ATOM 7 C4' G B2113 102.939 96.438 55.922 1.00 52.28 C
ATOM 8 O4' G B2113 103.815 97.265 55.120 1.00 51.95 O
ATOM 9 C3' G B2113 102.610 97.303 57.131 1.00 52.23 C
ATOM 10 O3' G B2113 102.258 96.526 58.268 1.00 53.03 O
ATOM 11 C2' G B2113 103.916 98.042 57.363 1.00 52.55 C
ATOM 12 O2' G B2113 104.863 97.242 58.038 1.00 52.87 O
ATOM 13 C1' G B2113 104.381 98.284 55.927 1.00 52.36 C
ATOM 14 N9 G B2113 103.961 99.582 55.403 1.00 51.45 N
ATOM 15 C8 G B2113 102.878 99.854 54.601 1.00 51.62 C
ATOM 16 N7 G B2113 102.760 101.122 54.316 1.00 52.15 N
ATOM 17 C5 G B2113 103.829 101.721 54.969 1.00 52.04 C
ATOM 18 C6 G B2113 104.220 103.084 55.038 1.00 53.10 C
ATOM 19 O6 G B2113 103.675 104.073 54.531 1.00 54.88 O
ATOM 20 N1 G B2113 105.371 103.245 55.796 1.00 52.60 N
ATOM 21 C2 G B2113 106.057 102.230 56.408 1.00 52.86 C
ATOM 22 N2 G B2113 107.164 102.584 57.068 1.00 55.20 N
ATOM 23 N3 G B2113 105.695 100.963 56.369 1.00 51.53 N
ATOM 24 C4 G B2113 104.582 100.781 55.635 1.00 51.09 C
ATOM 25 P C B2114 101.599 97.241 59.551 1.00 55.28 P
ATOM 26 OP1 C B2114 101.378 96.210 60.603 1.00 55.07 O
ATOM 27 OP2 C B2114 100.453 98.057 59.077 1.00 56.00 O
ATOM 28 O5' C B2114 102.730 98.232 60.070 1.00 53.73 O
TER
ATOM 2 P A A1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 3 OP1 A A1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 4 OP2 A A1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 5 O5' A A1888 115.662 95.989 54.796 1.00 73.25 O
ATOM 6 C5' A A1888 116.103 97.014 53.881 1.00 69.78 C
ATOM 7 C4' A A1888 115.235 98.253 53.990 1.00 67.41 C
ATOM 8 O4' A A1888 113.970 98.050 53.312 1.00 66.99 O
ATOM 9 C3' A A1888 114.848 98.719 55.383 1.00 65.33 C
ATOM 10 O3' A A1888 115.896 99.447 56.005 1.00 63.29 O
ATOM 11 C2' A A1888 113.626 99.581 55.094 1.00 65.91 C
ATOM 12 O2' A A1888 113.961 100.853 54.574 1.00 66.98 O
ATOM 13 C1' A A1888 112.952 98.776 53.982 1.00 66.34 C
ATOM 14 N9 A A1888 111.966 97.815 54.476 1.00 66.43 N
ATOM 15 C8 A A1888 112.180 96.509 54.853 1.00 66.27 C
ATOM 16 N7 A A1888 111.093 95.883 55.235 1.00 66.25 N
ATOM 17 C5 A A1888 110.097 96.841 55.109 1.00 65.42 C
ATOM 18 C6 A A1888 108.720 96.805 55.362 1.00 63.85 C
ATOM 19 N6 A A1888 108.080 95.729 55.820 1.00 63.30 N
ATOM 20 N1 A A1888 108.012 97.928 55.133 1.00 64.37 N
ATOM 21 C2 A A1888 108.655 99.014 54.686 1.00 64.58 C
ATOM 22 N3 A A1888 109.945 99.175 54.414 1.00 65.21 N
ATOM 23 C4 A A1888 110.621 98.038 54.648 1.00 65.89 C
ATOM 24 P A A1889 116.052 99.410 57.604 1.00 62.69 P
ATOM 25 OP1 A A1889 117.360 100.025 57.952 1.00 61.37 O
ATOM 26 OP2 A A1889 115.741 98.036 58.080 1.00 63.08 O
ATOM 27 O5' A A1889 114.889 100.368 58.119 1.00 61.65 O
TER
ATOM 1 O3' A B2112 100.329 96.773 52.236 1.00 53.85 O
ATOM 2 P G B2113 99.735 97.027 53.703 1.00 54.61 P
ATOM 3 OP1 G B2113 99.005 95.784 54.075 1.00 53.97 O
ATOM 4 OP2 G B2113 99.012 98.322 53.690 1.00 54.62 O
ATOM 5 O5' G B2113 101.033 97.180 54.620 1.00 54.02 O
ATOM 6 C5' G B2113 101.772 96.020 55.062 1.00 53.30 C
ATOM 7 C4' G B2113 102.939 96.438 55.922 1.00 52.28 C
ATOM 8 O4' G B2113 103.815 97.265 55.120 1.00 51.95 O
ATOM 9 C3' G B2113 102.610 97.303 57.131 1.00 52.23 C
ATOM 10 O3' G B2113 102.258 96.526 58.268 1.00 53.03 O
ATOM 11 C2' G B2113 103.916 98.042 57.363 1.00 52.55 C
ATOM 12 O2' G B2113 104.863 97.242 58.038 1.00 52.87 O
ATOM 13 C1' G B2113 104.381 98.284 55.927 1.00 52.36 C
ATOM 14 N9 G B2113 103.961 99.582 55.403 1.00 51.45 N
ATOM 15 C8 G B2113 102.878 99.854 54.601 1.00 51.62 C
ATOM 16 N7 G B2113 102.760 101.122 54.316 1.00 52.15 N
ATOM 17 C5 G B2113 103.829 101.721 54.969 1.00 52.04 C
ATOM 18 C6 G B2113 104.220 103.084 55.038 1.00 53.10 C
ATOM 19 O6 G B2113 103.675 104.073 54.531 1.00 54.88 O
ATOM 20 N1 G B2113 105.371 103.245 55.796 1.00 52.60 N
ATOM 21 C2 G B2113 106.057 102.230 56.408 1.00 52.86 C
ATOM 22 N2 G B2113 107.164 102.584 57.068 1.00 55.20 N
ATOM 23 N3 G B2113 105.695 100.963 56.369 1.00 51.53 N
ATOM 24 C4 G B2113 104.582 100.781 55.635 1.00 51.09 C
ATOM 25 P C B2114 101.599 97.241 59.551 1.00 55.28 P
ATOM 26 OP1 C B2114 101.378 96.210 60.603 1.00 55.07 O
ATOM 27 OP2 C B2114 100.453 98.057 59.077 1.00 56.00 O
ATOM 28 O5' C B2114 102.730 98.232 60.070 1.00 53.73 O
TER
Atoms:
OP1: (117.972,95.486,55.531)
OP2: (116.022,94.049,56.330)
C3': (114.848,98.719,55.383)
C1': (112.952,98.776,53.982)
C5': (116.103,97.014,53.881)
O4': (113.970,98.050,53.312)
C8: (112.180,96.509,54.853)
O2': (113.961,100.853,54.574)
C6: (108.720,96.805,55.362)
C5: (110.097,96.841,55.109)
C4: (110.621,98.038,54.648)
P: (116.665,94.840,55.262)
C4': (115.235,98.253,53.990)
C2': (113.626,99.581,55.094)
C2: (108.655,99.014,54.686)
N1: (108.012,97.928,55.133)
N3: (109.945,99.175,54.414)
N6: (108.080,95.729,55.820)
N7: (111.093,95.883,55.235)
N9: (111.966,97.815,54.476)
O5': (115.662,95.989,54.796)
O3': (115.896,99.447,56.005)
OP2: (116.022,94.049,56.330)
C3': (114.848,98.719,55.383)
C1': (112.952,98.776,53.982)
C5': (116.103,97.014,53.881)
O4': (113.970,98.050,53.312)
C8: (112.180,96.509,54.853)
O2': (113.961,100.853,54.574)
C6: (108.720,96.805,55.362)
C5: (110.097,96.841,55.109)
C4: (110.621,98.038,54.648)
P: (116.665,94.840,55.262)
C4': (115.235,98.253,53.990)
C2': (113.626,99.581,55.094)
C2: (108.655,99.014,54.686)
N1: (108.012,97.928,55.133)
N3: (109.945,99.175,54.414)
N6: (108.080,95.729,55.820)
N7: (111.093,95.883,55.235)
N9: (111.966,97.815,54.476)
O5': (115.662,95.989,54.796)
O3': (115.896,99.447,56.005)
OP1: (99.005,95.784,54.075)
OP2: (99.012,98.322,53.690)
C3': (102.610,97.303,57.131)
C1': (104.381,98.284,55.927)
C5': (101.772,96.020,55.062)
O6: (103.675,104.073,54.531)
O4': (103.815,97.265,55.120)
C8: (102.878,99.854,54.601)
C2: (106.057,102.230,56.408)
C6: (104.220,103.084,55.038)
C5: (103.829,101.721,54.969)
C4: (104.582,100.781,55.635)
P: (99.735,97.027,53.703)
C4': (102.939,96.438,55.922)
C2': (103.916,98.042,57.363)
O2': (104.863,97.242,58.038)
N1: (105.371,103.245,55.796)
N2: (107.164,102.584,57.068)
N3: (105.695,100.963,56.369)
N7: (102.760,101.122,54.316)
N9: (103.961,99.582,55.403)
O5': (101.033,97.180,54.620)
O3': (102.258,96.526,58.268)
OP2: (99.012,98.322,53.690)
C3': (102.610,97.303,57.131)
C1': (104.381,98.284,55.927)
C5': (101.772,96.020,55.062)
O6: (103.675,104.073,54.531)
O4': (103.815,97.265,55.120)
C8: (102.878,99.854,54.601)
C2: (106.057,102.230,56.408)
C6: (104.220,103.084,55.038)
C5: (103.829,101.721,54.969)
C4: (104.582,100.781,55.635)
P: (99.735,97.027,53.703)
C4': (102.939,96.438,55.922)
C2': (103.916,98.042,57.363)
O2': (104.863,97.242,58.038)
N1: (105.371,103.245,55.796)
N2: (107.164,102.584,57.068)
N3: (105.695,100.963,56.369)
N7: (102.760,101.122,54.316)
N9: (103.961,99.582,55.403)
O5': (101.033,97.180,54.620)
O3': (102.258,96.526,58.268)
Image (generated by PyMOL):